Personal tools

FFCP PHASE1:Mm9::chr11:5737763..5737838,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:5737763..5737838,-
|DHSsupport=NA
|short_description=p1@Polm
|DPIdataset=NA
|description=CAGE_peak_1_at_Polm_5end
|association_with_transcript=0bp_to_ENSMUST00000109837,ENSMUST00000153987_5end
|EntrezGene=54125
|EntrezGene=54125
|HGNC=
|HGNC=
|MCL_coexpression_id=18
|TSSclassifier=NA
|UniProt=Q5NCI3
|UniProt=Q5NCI3
|association_with_transcript=0bp_to_ENSMUST00000109837,ENSMUST00000153987_5end
|cluster_id=chr11:5737763..5737838,-
|description=CAGE_peak_1_at_Polm_5end
|id=chr11:5737763..5737838,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.18e-11!130;UBERON:0000925!1.18e-11!130;UBERON:0006595!1.18e-11!130;UBERON:0001007!6.99e-11!128;UBERON:0001555!6.99e-11!128;UBERON:0007026!6.99e-11!128;UBERON:0004921!1.22e-10!126;UBERON:0004185!1.22e-10!126;UBERON:0005409!7.25e-10!59;UBERON:0002193!7.58e-08!48;UBERON:0004923!1.36e-07!24;UBERON:0004177!2.79e-07!29;UBERON:0002390!3.41e-07!45;UBERON:0003061!3.41e-07!45;UBERON:0000160!5.07e-07!43;UBERON:0003104!9.16e-07!131;UBERON:0009142!9.16e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.95e-10,118;UBERON:0000925,2.95e-10,118;UBERON:0006595,2.95e-10,118;UBERON:0001007,1.57e-09,116;UBERON:0001555,1.57e-09,116;UBERON:0007026,1.57e-09,116;UBERON:0004921,2.63e-09,114;UBERON:0005409,5.10e-09,47;UBERON:0000077,6.97e-09,35;UBERON:0002193,7.58e-08,48;UBERON:0002405,7.58e-08,48;UBERON:0004923,1.36e-07,24;UBERON:0004177,2.79e-07,29;UBERON:0005057,2.79e-07,29;UBERON:0002390,3.41e-07,45;UBERON:0003061,3.41e-07,45
|phase1_expression=3.52327463630547,9.07336059862339,13.1949779422965,4.53696316960245,7.01254021924886,7.38668796412315,10.7461814673942,22.0800883085095,12.3894075493467,12.1713553687437,9.75942418885378,10.2108363514031,16.7776715332582,15.9105132402575,6.32908547449759,10.7311891716608,4.19737126876888,41.9564679926456,35.6497527374921,48.3804203049754,3.57181818634493,1.68794617041505,1.82839852397255,5.59973479776923,6.42345986988076,6.89078356938024,6.8921919385452,7.32602191132023,6.46079626151671,7.05684363327806,7.98229838359097,8.89042942843484,12.916360539276,0,7.51014211353314,5.15327400611326,6.32925004413344,14.2300754450549,11.720030167857,10.9939986234498,11.1763982725893,20.4913645487534,18.4493934151838,11.5825072537531,9.83356232829291,8.81024410376071,13.3006528539167,2.39827672018491,2.19686182734472,2.91644848611425,9.23910382727393,1.43752564364972,19.1272170905819,5.80289713609076,10.4189077734164,4.3734104126111,7.16333599846892,1.54701627683233,4.04632921719196,2.11596391708813,1.26766280701236,10.165335962074,7.11435836888911,10.7987966073768,7.9109309005358,7.8152812644071,5.99200221036809,5.76327457982332,2.7996195323289,4.3201900266141,3.15487442027073,2.28520787523043,2.87129103237098,2.32732518508413,4.12135525378416,1.83843757322004,2.20231761998777,2.29837208553338,1.38245879930619,3.69281605644543,4.29991924931325,3.64639359389732,0.837548997004143,2.25105044012672,3.0559649555362,3.24091444021034,2.84743361598206,2.98239113320481,5.83091688665517,6.72586884950391,5.79728977403356,0.860423876981386,1.3599426674155,2.15881276655127,5.19821133958135,3.58421509677868,2.10666630197628,3.57903677413921,5.71529210126311,2.47337702157238,2.95771181531029,3.84979432242953,2.54805239706646,7.11066703153331,7.36069539438128,5.32055717497707,4.04419556011827,3.08296475241462,22.7865337609511,3.26572705942614,4.8575891494518,3.95805121805784,4.38169444786511,4.22023393547343,4.70354828542819,2.01066546127481,8.89901883843746,3.18118585223806,16.8076004870476,4.04417124868523,13.6921741445444,12.1218813283806,9.31958806090611,3.80615036115011,5.02672096352292,8.9409969323007,0.958520996047362,1.19980546198682,1.01656181658452,3.59497534571574,4.57500602818627,5.6544458450789,3.12883776346098,2.55715457330331,2.28566849015516,3.40706652442291,4.88828946481518,16.4217201205323,9.35074206204597,3.99839526184301,4.81445638962004,4.82794419310293,3.60124259610698,4.37043971723574,3.06164246180975,1.2811372028485,2.43624483855295,5.17406741478031,2.37124792226126,3.02569728268511,4.57472922826267,4.16471891612392,3.89266148915837,6.61679116392116,5.76189981942242,6.36909653819178,2.1066395619397,1.28673953557358,1.98914449576915,3.10688658803253,5.8631514995274,1.98068267607116,4.7348947117042,2.36117078096885,2.77680803197281,5.58081467400979,3.21928081679543,3.26942958628075,2.30383789878873,2.79084688934462,1.70244500046297,2.77779976108131,3.07370161407471,2.68412837520744,2.52347938276953,3.19004298375782,8.92130714056255,6.34681359992506,4.05247676016945,3.48355007790658,7.86091514064769,8.0673409849337,8.45036566610507,8.3699275489526,7.11793592316767,4.6115707322723,7.03738584640755,7.16243299348143,6.82374304916921,4.49409704327111,7.99710784536369,4.97853183135918,4.36236172192088,4.45569199177942,4.50830942692322,5.29493452397817,5.04276466635827,3.99774173374816,5.12215950706484,2.21415221969403,4.70996183524124,3.57851775373222,3.55743152504579,3.00321190288969,3.14494392181125,3.59779379815766,1.82574109249653,3.37648023653384,1.78238096246994,6.04161888646702,6.80967952455149,2.47105271869273,4.31304619582064,3.34926852901653,4.36852742360385,3.28352541331245,3.04975602987251,3.37710464954357,7.57488079683079,5.11626811780309,4.23708938749267,4.2436271443797,4.45911471748154,7.03526281255626,7.14130922658041,8.39074685788535,6.62067605246002,5.09368786192182,3.98636921643718,9.99566219766002,6.73471429276993,7.5217510462386,3.01582567878545,3.26343410291226,3.44234991113325,5.79467167239938,3.37156238974363,1.99259867206745,4.91804836130026,1.51482556322624,3.15508219416257,3.51394869866975,3.44677436372478,4.54040716109849,5.34716817797746,3.11384183867716,2.42886421004937,1.46127928955656,5.92931666919785,2.89189184779626,5.25178315270594,7.12262414669021,3.90928702448583,7.4236555337641,7.96470830039777,5.82673526771955,6.95344181018927,7.16699303072413,10.0402643579463,7.68587869859819,9.8202751403924,6.5436071305951,6.06045543254026,5.68866164284469,2.10837217149998,2.06271086496374,10.5536277783674,6.30213829109586,8.92574918101006,5.5727629108214,6.91626911204867,4.28085162244969,3.45552943264454,5.48036908406279,7.97883807416615,13.9809166770121,7.71849393192367,11.0473789470792,4.84393280087717,6.27254419252821,6.80422360817878,7.2221995887827,7.86998258900597,2.03967832211561,8.03093139749908,7.22354037871279,7.77817014952789,9.98352822124862,12.8492574057764,17.8446975101088,0.169978429993855,0.279902904647316,0.690999869022119,12.4107180341965,5.06137589729817,5.69294507955176,4.96824567780286,4.80903080833278,4.36725127492355,5.79916689454729,6.11635572367486,6.02038666563268,8.03612834409116,4.97071450469541,1.12738587736838,5.08356256549528,3.97100377097034,6.02798683866548,4.1331143512874,4.73077151374179,3.28600268208111,4.4269490846943,3.98465508817701,2.41584120826006,2.01621004380506,7.90027801570446,6.08175645870493,4.5192821152524,4.93699127315621,5.54982756569192,4.76835251475036,6.00977247599844,6.94140777720513,7.06765149637033,7.54447385884498,7.9652686258104,8.47883562435846,8.178006539428,8.99952146798081,5.66825959038028,7.32553646134413,15.2513556236109,11.4161539127573,6.18206700903009,12.5747258552292,8.24182309202693,9.21784030039983,10.5330141847426,0,0.920650473014354,0.572895513439397,1.20297227640581,1.37016503954128,1.5107877947794,1.35004500046361,2.70192721934532,2.26571204492102,0.51776031175182,3.63255716544618,3.19219898720825,3.92687293234509,2.91728060481953,2.72497111416377,2.94149613520023,3.11145418922261,3.09052585858341,3.85103051510178,5.05394423527595,5.57654459758527,4.71565853465191,4.40115085108447,5.05798703998467,3.96304735793732,5.71552429539688,3.70829843023538,3.47236596834669,3.29668720642645,3.23837624295674,2.05721551431249,3.01708870470874,4.05341522910446,3.0522747492789,3.48204707536723,4.3153450024755,6.0366231048015,2.63069711437843,2.58027816307137,5.61142271657738,4.50813068871862,3.25064791839359,4.50154147486658,4.95797891795091,4.24394544158511,3.99696924700713,5.84829021113521,5.80151845930405,5.35607329792761,3.30887128679273,4.63735671240843
|phase1_expression=3.52327463630547,9.07336059862339,13.1949779422965,4.53696316960245,7.01254021924886,7.38668796412315,10.7461814673942,22.0800883085095,12.3894075493467,12.1713553687437,9.75942418885378,10.2108363514031,16.7776715332582,15.9105132402575,6.32908547449759,10.7311891716608,4.19737126876888,41.9564679926456,35.6497527374921,48.3804203049754,3.57181818634493,1.68794617041505,1.82839852397255,5.59973479776923,6.42345986988076,6.89078356938024,6.8921919385452,7.32602191132023,6.46079626151671,7.05684363327806,7.98229838359097,8.89042942843484,12.916360539276,0,7.51014211353314,5.15327400611326,6.32925004413344,14.2300754450549,11.720030167857,10.9939986234498,11.1763982725893,20.4913645487534,18.4493934151838,11.5825072537531,9.83356232829291,8.81024410376071,13.3006528539167,2.39827672018491,2.19686182734472,2.91644848611425,9.23910382727393,1.43752564364972,19.1272170905819,5.80289713609076,10.4189077734164,4.3734104126111,7.16333599846892,1.54701627683233,4.04632921719196,2.11596391708813,1.26766280701236,10.165335962074,7.11435836888911,10.7987966073768,7.9109309005358,7.8152812644071,5.99200221036809,5.76327457982332,2.7996195323289,4.3201900266141,3.15487442027073,2.28520787523043,2.87129103237098,2.32732518508413,4.12135525378416,1.83843757322004,2.20231761998777,2.29837208553338,1.38245879930619,3.69281605644543,4.29991924931325,3.64639359389732,0.837548997004143,2.25105044012672,3.0559649555362,3.24091444021034,2.84743361598206,2.98239113320481,5.83091688665517,6.72586884950391,5.79728977403356,0.860423876981386,1.3599426674155,2.15881276655127,5.19821133958135,3.58421509677868,2.10666630197628,3.57903677413921,5.71529210126311,2.47337702157238,2.95771181531029,3.84979432242953,2.54805239706646,7.11066703153331,7.36069539438128,5.32055717497707,4.04419556011827,3.08296475241462,22.7865337609511,3.26572705942614,4.8575891494518,3.95805121805784,4.38169444786511,4.22023393547343,4.70354828542819,2.01066546127481,8.89901883843746,3.18118585223806,16.8076004870476,4.04417124868523,13.6921741445444,12.1218813283806,9.31958806090611,3.80615036115011,5.02672096352292,8.9409969323007,0.958520996047362,1.19980546198682,1.01656181658452,3.59497534571574,4.57500602818627,5.6544458450789,3.12883776346098,2.55715457330331,2.28566849015516,3.40706652442291,4.88828946481518,16.4217201205323,9.35074206204597,3.99839526184301,4.81445638962004,4.82794419310293,3.60124259610698,4.37043971723574,3.06164246180975,1.2811372028485,2.43624483855295,5.17406741478031,2.37124792226126,3.02569728268511,4.57472922826267,4.16471891612392,3.89266148915837,6.61679116392116,5.76189981942242,6.36909653819178,2.1066395619397,1.28673953557358,1.98914449576915,3.10688658803253,5.8631514995274,1.98068267607116,4.7348947117042,2.36117078096885,2.77680803197281,5.58081467400979,3.21928081679543,3.26942958628075,2.30383789878873,2.79084688934462,1.70244500046297,2.77779976108131,3.07370161407471,2.68412837520744,2.52347938276953,3.19004298375782,8.92130714056255,6.34681359992506,4.05247676016945,3.48355007790658,7.86091514064769,8.0673409849337,8.45036566610507,8.3699275489526,7.11793592316767,4.6115707322723,7.03738584640755,7.16243299348143,6.82374304916921,4.49409704327111,7.99710784536369,4.97853183135918,4.36236172192088,4.45569199177942,4.50830942692322,5.29493452397817,5.04276466635827,3.99774173374816,5.12215950706484,2.21415221969403,4.70996183524124,3.57851775373222,3.55743152504579,3.00321190288969,3.14494392181125,3.59779379815766,1.82574109249653,3.37648023653384,1.78238096246994,6.04161888646702,6.80967952455149,2.47105271869273,4.31304619582064,3.34926852901653,4.36852742360385,3.28352541331245,3.04975602987251,3.37710464954357,7.57488079683079,5.11626811780309,4.23708938749267,4.2436271443797,4.45911471748154,7.03526281255626,7.14130922658041,8.39074685788535,6.62067605246002,5.09368786192182,3.98636921643718,9.99566219766002,6.73471429276993,7.5217510462386,3.01582567878545,3.26343410291226,3.44234991113325,5.79467167239938,3.37156238974363,1.99259867206745,4.91804836130026,1.51482556322624,3.15508219416257,3.51394869866975,3.44677436372478,4.54040716109849,5.34716817797746,3.11384183867716,2.42886421004937,1.46127928955656,5.92931666919785,2.89189184779626,5.25178315270594,7.12262414669021,3.90928702448583,7.4236555337641,7.96470830039777,5.82673526771955,6.95344181018927,7.16699303072413,10.0402643579463,7.68587869859819,9.8202751403924,6.5436071305951,6.06045543254026,5.68866164284469,2.10837217149998,2.06271086496374,10.5536277783674,6.30213829109586,8.92574918101006,5.5727629108214,6.91626911204867,4.28085162244969,3.45552943264454,5.48036908406279,7.97883807416615,13.9809166770121,7.71849393192367,11.0473789470792,4.84393280087717,6.27254419252821,6.80422360817878,7.2221995887827,7.86998258900597,2.03967832211561,8.03093139749908,7.22354037871279,7.77817014952789,9.98352822124862,12.8492574057764,17.8446975101088,0.169978429993855,0.279902904647316,0.690999869022119,12.4107180341965,5.06137589729817,5.69294507955176,4.96824567780286,4.80903080833278,4.36725127492355,5.79916689454729,6.11635572367486,6.02038666563268,8.03612834409116,4.97071450469541,1.12738587736838,5.08356256549528,3.97100377097034,6.02798683866548,4.1331143512874,4.73077151374179,3.28600268208111,4.4269490846943,3.98465508817701,2.41584120826006,2.01621004380506,7.90027801570446,6.08175645870493,4.5192821152524,4.93699127315621,5.54982756569192,4.76835251475036,6.00977247599844,6.94140777720513,7.06765149637033,7.54447385884498,7.9652686258104,8.47883562435846,8.178006539428,8.99952146798081,5.66825959038028,7.32553646134413,15.2513556236109,11.4161539127573,6.18206700903009,12.5747258552292,8.24182309202693,9.21784030039983,10.5330141847426,0,0.920650473014354,0.572895513439397,1.20297227640581,1.37016503954128,1.5107877947794,1.35004500046361,2.70192721934532,2.26571204492102,0.51776031175182,3.63255716544618,3.19219898720825,3.92687293234509,2.91728060481953,2.72497111416377,2.94149613520023,3.11145418922261,3.09052585858341,3.85103051510178,5.05394423527595,5.57654459758527,4.71565853465191,4.40115085108447,5.05798703998467,3.96304735793732,5.71552429539688,3.70829843023538,3.47236596834669,3.29668720642645,3.23837624295674,2.05721551431249,3.01708870470874,4.05341522910446,3.0522747492789,3.48204707536723,4.3153450024755,6.0366231048015,2.63069711437843,2.58027816307137,5.61142271657738,4.50813068871862,3.25064791839359,4.50154147486658,4.95797891795091,4.24394544158511,3.99696924700713,5.84829021113521,5.80151845930405,5.35607329792761,3.30887128679273,4.63735671240843
|short_description=p1@Polm
}}
}}

Latest revision as of 18:08, 1 October 2015

Short description:p1@Polm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Polm_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: 0bp_to_ENSMUST00000109837, ENSMUST00000153987_5end
EntrezGene:Polm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Polm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.76
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.78
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.96
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A435.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A648.38
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B96.46
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H220.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.83
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D95.83
Mouse Schwann, donor2.CNhs12573.11746-123F96.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H78.94
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.42
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D55.12
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G310.04
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G313.98
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H36.27
skin, neonate N06.CNhs11097.693-20I56.80
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D19.98
spleen, neonate N20.CNhs11112.824-19H112.85
spleen, neonate N25.CNhs11099.1354-25G317.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D44.97
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F86.01
thymus, neonate N03.CNhs11137.2104-43C76.94
thymus, neonate N06.CNhs11197.681-26C47.07
thymus, neonate N07.CNhs11211.713-19D37.54
thymus, neonate N10.CNhs11194.748-24E47.97
thymus, neonate N20.CNhs11186.820-7A28.48
thymus, neonate N25.CNhs11125.1362-25G78.18
thymus, neonate N30.CNhs11132.1393-42G29.00
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.42
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F512.57
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.95e-10118
endoderm2.95e-10118
presumptive endoderm2.95e-10118
digestive system1.57e-09116
digestive tract1.57e-09116
primitive gut1.57e-09116
subdivision of digestive tract2.63e-09114
gastrointestinal system5.10e-0947
mixed endoderm/mesoderm-derived structure6.97e-0935
hemolymphoid system7.58e-0848
immune system7.58e-0848
organ component layer1.36e-0724
hemopoietic organ2.79e-0729
immune organ2.79e-0729
hematopoietic system3.41e-0745
blood island3.41e-0745
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:5737763..5737838,-&oldid=4315557"