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FFCP PHASE1:Mm9::chr12:38607287..38607315,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:38607287..38607315,+
|DHSsupport=NA
|short_description=p5@Dgkb
|DPIdataset=NA
|description=CAGE_peak_5_at_Dgkb_5end
|association_with_transcript=0bp_to_ENSMUST00000040500,ENSMUST00000072865,ENSMUST00000164124,ENSMUST00000170871,NM_178681,uc007nkk.1,uc007nkl.1_5end
|EntrezGene=217480
|EntrezGene=217480
|HGNC=
|HGNC=
|MCL_coexpression_id=90
|TSSclassifier=NA
|UniProt=Q6NS52,F8WII9,Q8BUN1,E9PZM3
|UniProt=Q6NS52,F8WII9,Q8BUN1,E9PZM3
|association_with_transcript=0bp_to_ENSMUST00000040500,ENSMUST00000072865,ENSMUST00000164124,ENSMUST00000170871,NM_178681,uc007nkk.1,uc007nkl.1_5end
|cluster_id=chr12:38607287..38607315,+
|description=CAGE_peak_5_at_Dgkb_5end
|id=chr12:38607287..38607315,+
|ontology_enrichment_celltype=CL:0000540!4.93e-08!33;CL:0000047!4.93e-08!33;CL:0000031!4.93e-08!33;CL:0000404!4.93e-08!33;CL:0000117!7.69e-08!23;CL:0000337!7.69e-08!23
|ontology_enrichment_celltype_v019_2=CL:0002614,2.52e-07,3;CL:0002610,5.32e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.44e-18!73;UBERON:0005743!1.44e-18!73;UBERON:0000073!2.12e-17!75;UBERON:0001016!2.12e-17!75;UBERON:0001049!6.11e-17!52;UBERON:0005068!6.11e-17!52;UBERON:0006241!6.11e-17!52;UBERON:0007135!6.11e-17!52;UBERON:0002346!2.11e-16!71;UBERON:0003075!2.11e-16!71;UBERON:0007284!2.11e-16!71;UBERON:0000955!2.43e-16!50;UBERON:0006238!2.43e-16!50;UBERON:0002616!1.36e-15!49;UBERON:0004121!1.80e-15!102;UBERON:0000924!1.80e-15!102;UBERON:0006601!1.80e-15!102;UBERON:0000033!7.47e-15!63;UBERON:0002020!8.16e-14!34;UBERON:0003080!6.91e-13!40;UBERON:0002780!2.96e-12!39;UBERON:0001890!2.96e-12!39;UBERON:0006240!2.96e-12!39;UBERON:0003056!5.86e-12!49;UBERON:0002791!2.90e-11!29;UBERON:0003528!2.90e-11!29;UBERON:0001893!2.90e-11!29;UBERON:0002021!5.51e-09!10;UBERON:0000411!5.51e-09!10;UBERON:0001950!5.51e-09!10;UBERON:0000956!2.39e-08!21;UBERON:0001869!2.39e-08!21;UBERON:0000203!2.39e-08!21;UBERON:0002619!1.32e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0001049,6.76e-27,52;UBERON:0005068,6.76e-27,52;UBERON:0006241,6.76e-27,52;UBERON:0007135,6.76e-27,52;UBERON:0002020,6.71e-26,34;UBERON:0001017,4.42e-24,73;UBERON:0000955,6.70e-24,47;UBERON:0006238,6.70e-24,47;UBERON:0001016,3.03e-23,75;UBERON:0002021,5.50e-23,10;UBERON:0000411,5.50e-23,10;UBERON:0001950,5.50e-23,10;UBERON:0003528,8.08e-23,29;UBERON:0002791,8.08e-23,29;UBERON:0001893,8.08e-23,29;UBERON:0002616,3.68e-22,46;UBERON:0003080,9.78e-22,40;UBERON:0002346,1.28e-20,64;UBERON:0003075,1.28e-20,64;UBERON:0007284,1.28e-20,64;UBERON:0002780,3.51e-20,39;UBERON:0001890,3.51e-20,39;UBERON:0006240,3.51e-20,39;UBERON:0002619,2.98e-18,17;UBERON:0010371,2.88e-17,73;UBERON:0000956,5.27e-17,21;UBERON:0001869,5.27e-17,21;UBERON:0000203,5.27e-17,21;UBERON:0004121,8.00e-17,95;UBERON:0000924,8.00e-17,95;UBERON:0006601,8.00e-17,95;UBERON:0003056,9.17e-17,49;UBERON:0010314,2.34e-12,92;UBERON:0000025,1.64e-11,114;UBERON:0004111,2.67e-10,122;UBERON:0002950,3.16e-09,4;UBERON:0001891,3.16e-09,4;UBERON:0009616,3.16e-09,4;UBERON:0010286,3.16e-09,4;UBERON:0011216,1.14e-07,194;UBERON:0002038,2.52e-07,3;UBERON:0009663,2.52e-07,3;UBERON:0009661,2.52e-07,3;UBERON:0000125,2.52e-07,3;UBERON:0002308,2.52e-07,3;UBERON:0004684,5.32e-07,3;UBERON:0002275,5.32e-07,3;UBERON:0002420,6.09e-07,8;UBERON:0007245,6.09e-07,8;UBERON:0010009,6.09e-07,8;UBERON:0010011,6.09e-07,8;UBERON:0000454,6.09e-07,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.210324961351382,1.14260393761521,0.662605622854841,0.857435594504678,0.287536413054709,0,1.10115880999389,4.08599481872601,3.5329502648936,0.527545150920775,0.457438218012048,0,1.95428099300967,5.06486349028512,5.80633341551878,2.94628585473668,2.42031857358475,0.559198337475902,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.753613202763113,0.587943535678524,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,0.83778682725382,0.510914110417183,0,0,0,2.99581278809645,58.1025765579656,1.38219787324151,17.3824320192276,10.9957646652042,6.85700547046548,22.064811777215,0.203678727700633,0,0,0,0,0,0.720248519221397,0.150704817835715,0.408218994907967,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,15.1408762966172,1.44066457330998,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.38992817423824,0,0.648414149624083,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,0.476087281772027,0.975668239288994,1.10344600874334,2.21464689648775,0.797273843287435,0,0,0,0,0,0,0.275936746304732,2.0871576698413,2.34423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,12.5315313404505,0.283880170416537,0,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,2.03967832211561,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,4.51801474093653,11.9684561491866,6.30185064783336,7.21783365843488,10.2762377965596,12.0863023582352,7.42524750254986,11.2580300806055,9.06284817968409,8.80192529978094,0,0.399024873401031,0.341467211508268,0.972426868273176,0,0,0.888986911206461,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.448176066834085,0.516919220600519,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.941093804153306,0.761531471025089,0.548783918618318,0.789209134313529,0.679020569229309,0,0.237270036248348,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.210324961351382,1.14260393761521,0.662605622854841,0.857435594504678,0.287536413054709,0,1.10115880999389,4.08599481872601,3.5329502648936,0.527545150920775,0.457438218012048,0,1.95428099300967,5.06486349028512,5.80633341551878,2.94628585473668,2.42031857358475,0.559198337475902,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.753613202763113,0.587943535678524,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,0.83778682725382,0.510914110417183,0,0,0,2.99581278809645,58.1025765579656,1.38219787324151,17.3824320192276,10.9957646652042,6.85700547046548,22.064811777215,0.203678727700633,0,0,0,0,0,0.720248519221397,0.150704817835715,0.408218994907967,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,15.1408762966172,1.44066457330998,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.38992817423824,0,0.648414149624083,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,0.476087281772027,0.975668239288994,1.10344600874334,2.21464689648775,0.797273843287435,0,0,0,0,0,0,0.275936746304732,2.0871576698413,2.34423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,12.5315313404505,0.283880170416537,0,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,2.03967832211561,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,4.51801474093653,11.9684561491866,6.30185064783336,7.21783365843488,10.2762377965596,12.0863023582352,7.42524750254986,11.2580300806055,9.06284817968409,8.80192529978094,0,0.399024873401031,0.341467211508268,0.972426868273176,0,0,0.888986911206461,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.448176066834085,0.516919220600519,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.941093804153306,0.761531471025089,0.548783918618318,0.789209134313529,0.679020569229309,0,0.237270036248348,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0
|short_description=p5@Dgkb
}}
}}

Latest revision as of 14:28, 26 September 2015

Short description:p5@Dgkb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Dgkb_5end
Coexpression cluster:MCL_coexpression_mm9:90
Association with transcript: 0bp_to_ENSMUST00000040500, ENSMUST00000072865, ENSMUST00000164124, ENSMUST00000170871, NM_178681, uc007nkk.1, uc007nkl.1_5end
EntrezGene:Dgkb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Dgkb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D858.10
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B222.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra2.52e-073
raphe nuclei neuron5.32e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.41e-3054
neural tube6.76e-2752
neural rod6.76e-2752
future spinal cord6.76e-2752
neural keel6.76e-2752
gray matter6.71e-2634
central nervous system4.42e-2473
brain6.70e-2447
future brain6.70e-2447
nervous system3.03e-2375
occipital lobe5.50e-2310
visual cortex5.50e-2310
neocortex5.50e-2310
brain grey matter8.08e-2329
regional part of telencephalon8.08e-2329
telencephalon8.08e-2329
regional part of brain3.68e-2246
anterior neural tube9.78e-2240
neurectoderm1.28e-2064
neural plate1.28e-2064
presumptive neural plate1.28e-2064
regional part of forebrain3.51e-2039
forebrain3.51e-2039
future forebrain3.51e-2039
regional part of cerebral cortex2.98e-1817
ecto-epithelium2.88e-1773
cerebral cortex5.27e-1721
cerebral hemisphere5.27e-1721
pallium5.27e-1721
ectoderm-derived structure8.00e-1795
ectoderm8.00e-1795
presumptive ectoderm8.00e-1795
pre-chordal neural plate9.17e-1749
structure with developmental contribution from neural crest2.34e-1292
tube1.64e-11114
anatomical conduit2.67e-10122
regional part of midbrain3.16e-094
midbrain3.16e-094
presumptive midbrain3.16e-094
midbrain neural tube3.16e-094
organ system subdivision1.14e-07194
substantia nigra2.52e-073
telencephalic nucleus2.52e-073
midbrain nucleus2.52e-073
neural nucleus2.52e-073
nucleus of brain2.52e-073
raphe nuclei5.32e-073
reticular formation5.32e-073
basal ganglion6.09e-078
nuclear complex of neuraxis6.09e-078
aggregate regional part of brain6.09e-078
collection of basal ganglia6.09e-078
cerebral subcortex6.09e-078
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