FFCP PHASE1:Mm9::chr1:163001055..163001137,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:163001055..163001137,+ to FFCP PHASE1:Mm9::chr1:163001055..163001137,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70454 | |EntrezGene=70454 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=703 | |||
|TSSclassifier=NA | |||
|UniProt=Q05CX4,Q14A61,Q3U3S3 | |UniProt=Q05CX4,Q14A61,Q3U3S3 | ||
|association_with_transcript=32bp_to_ENSMUST00000111617,NM_001159930,NM_027429,uc007dfa.2,uc007dfb.2,uc007dfc.2,uc007dfd.2,uc007dfe.2_5end | |||
|cluster_id=chr1:163001055..163001137,+ | |||
|description=CAGE_peak_1_at_Cenpl_5end | |||
|id=chr1:163001055..163001137,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.24e-10!51;UBERON:0002405!1.86e-10!70;UBERON:0004177!1.10e-08!29;UBERON:0003929!1.32e-08!55;UBERON:0002193!6.02e-08!48;UBERON:0002390!8.04e-08!45;UBERON:0003061!8.04e-08!45;UBERON:0001007!1.83e-07!128;UBERON:0001555!1.83e-07!128;UBERON:0007026!1.83e-07!128;UBERON:0005911!2.08e-07!69;UBERON:0004921!4.19e-07!126;UBERON:0004185!4.19e-07!126;UBERON:0004119!5.82e-07!130;UBERON:0000925!5.82e-07!130;UBERON:0006595!5.82e-07!130;UBERON:0000490!7.16e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.64e-09,116;UBERON:0001555,1.64e-09,116;UBERON:0007026,1.64e-09,116;UBERON:0004921,4.17e-09,114;UBERON:0004119,6.80e-09,118;UBERON:0000925,6.80e-09,118;UBERON:0006595,6.80e-09,118;UBERON:0004177,1.10e-08,29;UBERON:0005057,1.10e-08,29;UBERON:0003929,1.32e-08,55;UBERON:0002193,6.01e-08,48;UBERON:0002405,6.01e-08,48;UBERON:0001041,6.11e-08,80;UBERON:0002390,8.03e-08,45;UBERON:0003061,8.03e-08,45;UBERON:0005911,2.08e-07,69;UBERON:0000490,7.15e-07,66 | |||
|phase1_expression=6.72625157840135,9.77131141390211,11.3749809847384,8.77146212789807,11.520601788766,8.72972213941827,9.81173090501208,7.48915275961142,18.3025338797167,18.9592266320815,3.76679530096111,2.23362045186942,5.82082481766099,6.03200776691082,41.9718299887735,71.6762446559984,103.535157962966,9.62159604342625,7.67840828192137,14.429248161133,4.59233766815777,16.3830069481461,16.194386926614,11.1994695955385,14.9116032693661,12.0588712464154,13.3536218809313,9.9116767035509,11.7814520062952,15.1218077855958,12.4169085966971,15.2407361630311,17.8368788399525,15.8481681015439,25.9966457776147,27.0962471934343,21.4377824075488,37.6678467663217,57.8188154947612,50.2582794214846,30.5880373776127,38.250547157673,34.9567454182431,5.28766635497425,3.24406179902447,3.85448179539531,1.56478268869608,3.92445281484804,2.85592037554813,1.74986909166855,4.33957907038624,0,7.88578248471361,13.0565185562042,17.8129713545506,2.82985379639542,3.43840127926508,1.03134418455488,2.42779753031517,2.64495489636016,5.07065122804943,2.03306719241479,4.4464739805557,1.3498495759221,2.96659908770092,1.4209602298922,2.69640099466564,1.92109152660777,7.15458324928496,6.21027316325777,6.94072372459561,1.99955689082663,1.10434270475807,10.2892271340561,10.543001812006,4.5960939330501,2.20231761998777,0.893811366596314,1.0752457327937,3.42904348098504,2.37867873366265,2.08365348222704,1.3959149950069,2.25105044012672,1.5279824777681,2.06240009831567,3.98640706237488,2.23679334990361,2.80186915332781,9.44644501334819,5.79728977403356,6.88339101585109,4.0798280022465,5.93673510801599,7.79731700937203,4.48026887097336,5.89866564553358,15.5091593546033,15.0675882669664,11.6602059588412,6.33795388995062,11.5493829672886,5.09610479413291,14.2213340630666,14.2884087067401,13.4280728701802,11.1215377903252,6.05174562511018,7.25026074212081,2.82040064223167,9.88866362566974,7.61163695780353,10.1470818792666,7.23468674652588,6.58496759959947,4.14699751387929,7.41584903203122,1.15679485535929,25.6537060065464,9.05894359705491,20.759102735277,29.0925151881133,3.72783522436244,0.585561594023094,1.25668024088073,7.91916871146633,36.1841676007879,20.3966928537759,21.601938602421,1.3481157546434,0.457500602818626,4.39790232395025,0.173824320192276,0.255715457330331,1.66230435647648,1.1356888414743,11.3041693873851,15.7996852674818,3.0326731012041,1.47309299120532,14.7036100547855,13.5642241615749,11.5239763075424,14.3169576943929,13.9474823260222,14.3487366719032,11.056803498048,1.81092359517311,14.8741915123661,10.0226222488944,13.5482365606241,11.1789823538063,10.8438427197983,6.61679116392116,9.4659782747654,10.5488161413801,16.1509033082044,19.3010930336036,23.017243451043,6.42089894860056,7.50483391939508,10.8037236876609,7.33908680314152,8.06733350164356,10.3358965634543,10.9290954032692,8.31647544338819,8.52386999280337,4.60767579757745,3.77585167381919,1.70244500046297,1.75439984910399,2.19550115291051,2.81833479396781,0.630869845692382,4.42489833230923,21.1468021109631,13.4869788998408,11.5175655289026,13.0052536241846,11.4692040576663,8.87407508342707,8.45036566610507,8.94060442729028,4.2707615539006,7.24675400785648,9.0480675168097,8.95304124185179,8.57841983324129,11.6846523125049,9.07779809473716,12.9441827615339,15.5527678781527,14.2810640762161,11.270773567308,11.6081256871829,9.89157684554891,9.32806404541237,8.03104021478068,3.83786384746966,4.86696056308262,4.81248939295022,6.81841042300442,26.3615267031429,26.142346350056,28.5574882728764,38.1377028210385,39.7942313591488,31.5736056208961,23.8787794084173,20.4290385736545,15.6500005517206,21.5652309791032,17.8627654880882,10.6092808858951,8.5876818502018,13.4548060141434,8.20153986317724,3.69506380333209,13.6433816474749,15.6446377384345,17.144253663294,14.0814148973101,11.7254380209271,5.47500374037832,4.48807390072937,8.19702749352193,11.7376285513851,3.98636921643718,3.60499292374624,4.31712454664739,6.79850575333104,18.0949540727127,5.98296252200581,7.37646409528554,3.03530420935206,1.12385412991454,1.17211686592203,9.83609672260053,3.7870639080656,9.14973836307144,12.4940398174924,11.6328634775711,9.55875191810208,8.02075226696619,7.35998980050964,9.31064613852257,5.55286130031493,8.30104333687699,0.321321316421807,3.69044221541498,7.30068975035746,13.1938437076397,3.79431282836832,0,8.01176099311439,7.25576536715402,7.16699303072413,3.54362271456927,9.22305443831782,6.97756391554197,10.9060118843252,10.3384239731569,2.21225730555071,3.16255825724996,4.12542172992747,3.40439605753788,12.4242154881604,5.56242340265844,7.28745919107414,5.32020700926821,5.70780216326626,5.92376474167636,4.26250928760439,5.16277757740163,2.75381692122966,1.7642271844397,4.61681508236144,5.65125493435669,11.9419591357749,9.43041517624778,7.71462228801788,8.16146342563582,0.741701208042039,25.9723738812736,15.2726282292785,20.3713980106683,54.250115617351,43.8788470984491,39.5786239647284,29.5762468189308,25.1912614182584,26.1197950490361,2.86401185404534,14.2351197111511,10.9792512248498,12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| |phase1_expression=6.72625157840135,9.77131141390211,11.3749809847384,8.77146212789807,11.520601788766,8.72972213941827,9.81173090501208,7.48915275961142,18.3025338797167,18.9592266320815,3.76679530096111,2.23362045186942,5.82082481766099,6.03200776691082,41.9718299887735,71.6762446559984,103.535157962966,9.62159604342625,7.67840828192137,14.429248161133,4.59233766815777,16.3830069481461,16.194386926614,11.1994695955385,14.9116032693661,12.0588712464154,13.3536218809313,9.9116767035509,11.7814520062952,15.1218077855958,12.4169085966971,15.2407361630311,17.8368788399525,15.8481681015439,25.9966457776147,27.0962471934343,21.4377824075488,37.6678467663217,57.8188154947612,50.2582794214846,30.5880373776127,38.250547157673,34.9567454182431,5.28766635497425,3.24406179902447,3.85448179539531,1.56478268869608,3.92445281484804,2.85592037554813,1.74986909166855,4.33957907038624,0,7.88578248471361,13.0565185562042,17.8129713545506,2.82985379639542,3.43840127926508,1.03134418455488,2.42779753031517,2.64495489636016,5.07065122804943,2.03306719241479,4.4464739805557,1.3498495759221,2.96659908770092,1.4209602298922,2.69640099466564,1.92109152660777,7.15458324928496,6.21027316325777,6.94072372459561,1.99955689082663,1.10434270475807,10.2892271340561,10.543001812006,4.5960939330501,2.20231761998777,0.893811366596314,1.0752457327937,3.42904348098504,2.37867873366265,2.08365348222704,1.3959149950069,2.25105044012672,1.5279824777681,2.06240009831567,3.98640706237488,2.23679334990361,2.80186915332781,9.44644501334819,5.79728977403356,6.88339101585109,4.0798280022465,5.93673510801599,7.79731700937203,4.48026887097336,5.89866564553358,15.5091593546033,15.0675882669664,11.6602059588412,6.33795388995062,11.5493829672886,5.09610479413291,14.2213340630666,14.2884087067401,13.4280728701802,11.1215377903252,6.05174562511018,7.25026074212081,2.82040064223167,9.88866362566974,7.61163695780353,10.1470818792666,7.23468674652588,6.58496759959947,4.14699751387929,7.41584903203122,1.15679485535929,25.6537060065464,9.05894359705491,20.759102735277,29.0925151881133,3.72783522436244,0.585561594023094,1.25668024088073,7.91916871146633,36.1841676007879,20.3966928537759,21.601938602421,1.3481157546434,0.457500602818626,4.39790232395025,0.173824320192276,0.255715457330331,1.66230435647648,1.1356888414743,11.3041693873851,15.7996852674818,3.0326731012041,1.47309299120532,14.7036100547855,13.5642241615749,11.5239763075424,14.3169576943929,13.9474823260222,14.3487366719032,11.056803498048,1.81092359517311,14.8741915123661,10.0226222488944,13.5482365606241,11.1789823538063,10.8438427197983,6.61679116392116,9.4659782747654,10.5488161413801,16.1509033082044,19.3010930336036,23.017243451043,6.42089894860056,7.50483391939508,10.8037236876609,7.33908680314152,8.06733350164356,10.3358965634543,10.9290954032692,8.31647544338819,8.52386999280337,4.60767579757745,3.77585167381919,1.70244500046297,1.75439984910399,2.19550115291051,2.81833479396781,0.630869845692382,4.42489833230923,21.1468021109631,13.4869788998408,11.5175655289026,13.0052536241846,11.4692040576663,8.87407508342707,8.45036566610507,8.94060442729028,4.2707615539006,7.24675400785648,9.0480675168097,8.95304124185179,8.57841983324129,11.6846523125049,9.07779809473716,12.9441827615339,15.5527678781527,14.2810640762161,11.270773567308,11.6081256871829,9.89157684554891,9.32806404541237,8.03104021478068,3.83786384746966,4.86696056308262,4.81248939295022,6.81841042300442,26.3615267031429,26.142346350056,28.5574882728764,38.1377028210385,39.7942313591488,31.5736056208961,23.8787794084173,20.4290385736545,15.6500005517206,21.5652309791032,17.8627654880882,10.6092808858951,8.5876818502018,13.4548060141434,8.20153986317724,3.69506380333209,13.6433816474749,15.6446377384345,17.144253663294,14.0814148973101,11.7254380209271,5.47500374037832,4.48807390072937,8.19702749352193,11.7376285513851,3.98636921643718,3.60499292374624,4.31712454664739,6.79850575333104,18.0949540727127,5.98296252200581,7.37646409528554,3.03530420935206,1.12385412991454,1.17211686592203,9.83609672260053,3.7870639080656,9.14973836307144,12.4940398174924,11.6328634775711,9.55875191810208,8.02075226696619,7.35998980050964,9.31064613852257,5.55286130031493,8.30104333687699,0.321321316421807,3.69044221541498,7.30068975035746,13.1938437076397,3.79431282836832,0,8.01176099311439,7.25576536715402,7.16699303072413,3.54362271456927,9.22305443831782,6.97756391554197,10.9060118843252,10.3384239731569,2.21225730555071,3.16255825724996,4.12542172992747,3.40439605753788,12.4242154881604,5.56242340265844,7.28745919107414,5.32020700926821,5.70780216326626,5.92376474167636,4.26250928760439,5.16277757740163,2.75381692122966,1.7642271844397,4.61681508236144,5.65125493435669,11.9419591357749,9.43041517624778,7.71462228801788,8.16146342563582,0.741701208042039,25.9723738812736,15.2726282292785,20.3713980106683,54.250115617351,43.8788470984491,39.5786239647284,29.5762468189308,25.1912614182584,26.1197950490361,2.86401185404534,14.2351197111511,10.9792512248498,12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| ||
|short_description=p1@Cenpl | |||
}} | }} |
Latest revision as of 15:54, 26 September 2015
Short description: | p1@Cenpl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cenpl_5end |
Coexpression cluster: | MCL_coexpression_mm9:703 |
Association with transcript: | 32bp_to_ENSMUST00000111617, NM_001159930, NM_027429, uc007dfa.2, uc007dfb.2, uc007dfc.2, uc007dfd.2, uc007dfe.2_5end |
EntrezGene: | Cenpl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.64e-09 | 116 |
digestive tract | 1.64e-09 | 116 |
primitive gut | 1.64e-09 | 116 |
subdivision of digestive tract | 4.17e-09 | 114 |
endoderm-derived structure | 6.80e-09 | 118 |
endoderm | 6.80e-09 | 118 |
presumptive endoderm | 6.80e-09 | 118 |
hemopoietic organ | 1.10e-08 | 29 |
immune organ | 1.10e-08 | 29 |
gut epithelium | 1.32e-08 | 55 |
hemolymphoid system | 6.01e-08 | 48 |
immune system | 6.01e-08 | 48 |
foregut | 6.11e-08 | 80 |
hematopoietic system | 8.03e-08 | 45 |
blood island | 8.03e-08 | 45 |
endo-epithelium | 2.08e-07 | 69 |
unilaminar epithelium | 7.15e-07 | 66 |