FFCP PHASE1:Mm9::chr1:175275934..175275941,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:175275934..175275941,- to FFCP PHASE1:Mm9::chr1:175275934..175275941,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=525 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:175275934..175275941,- | |||
|description=CAGE_peak_at_chr1:175275934..175275941,- | |||
|id=chr1:175275934..175275941,- | |||
|ontology_enrichment_celltype=CL:0000117!4.03e-25!23;CL:0000337!4.03e-25!23;CL:0000540!2.28e-19!33;CL:0000047!2.28e-19!33;CL:0000031!2.28e-19!33;CL:0000404!2.28e-19!33;CL:0002319!1.13e-17!43;CL:0000221!4.86e-17!44;CL:0000133!4.86e-17!44;CL:0000393!2.82e-16!39;CL:0000211!2.82e-16!39;CL:0000055!6.80e-15!50;CL:0002321!6.51e-08!70;CL:0000220!6.51e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.70e-40,23;CL:0000337,4.70e-40,23;CL:0000540,8.35e-27,33;CL:0000047,8.35e-27,33;CL:0000031,8.35e-27,33;CL:0000404,8.35e-27,33;CL:0000393,4.11e-22,39;CL:0000211,4.11e-22,39;CL:0002319,1.04e-19,43;CL:0000221,3.53e-19,44;CL:0000133,3.53e-19,44;CL:0002321,1.11e-10,70;CL:0002614,1.61e-10,3;CL:0002610,1.86e-10,3;CL:0002612,1.03e-09,3;CL:0002613,2.88e-09,3;CL:0000723,2.26e-07,91;CL:0000048,2.26e-07,91;CL:0002611,2.60e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.40e-39!73;UBERON:0005743!9.40e-39!73;UBERON:0000073!3.17e-37!75;UBERON:0001016!3.17e-37!75;UBERON:0001049!1.14e-32!52;UBERON:0005068!1.14e-32!52;UBERON:0006241!1.14e-32!52;UBERON:0007135!1.14e-32!52;UBERON:0004121!9.32e-32!102;UBERON:0000924!9.32e-32!102;UBERON:0006601!9.32e-32!102;UBERON:0002346!1.60e-31!71;UBERON:0003075!1.60e-31!71;UBERON:0007284!1.60e-31!71;UBERON:0002020!1.66e-31!34;UBERON:0000955!7.62e-31!50;UBERON:0006238!7.62e-31!50;UBERON:0002616!6.97e-30!49;UBERON:0000033!8.31e-30!63;UBERON:0002791!1.03e-25!29;UBERON:0003528!1.03e-25!29;UBERON:0001893!1.03e-25!29;UBERON:0003056!5.70e-25!49;UBERON:0003080!4.76e-23!40;UBERON:0002780!2.63e-22!39;UBERON:0001890!2.63e-22!39;UBERON:0006240!2.63e-22!39;UBERON:0007811!1.29e-18!86;UBERON:0000956!1.98e-17!21;UBERON:0001869!1.98e-17!21;UBERON:0000203!1.98e-17!21;UBERON:0000153!9.51e-16!94;UBERON:0002619!6.99e-14!17;UBERON:0002021!1.20e-12!10;UBERON:0000411!1.20e-12!10;UBERON:0001950!1.20e-12!10;UBERON:0000025!1.38e-10!114;UBERON:0003076!6.56e-10!12;UBERON:0003057!6.56e-10!12;UBERON:0002420!2.04e-09!8;UBERON:0007245!2.04e-09!8;UBERON:0010009!2.04e-09!8;UBERON:0010011!2.04e-09!8;UBERON:0000454!2.04e-09!8;UBERON:0004111!5.36e-09!122;UBERON:0002240!2.34e-07!6;UBERON:0005174!2.34e-07!6;UBERON:0001137!2.34e-07!6;UBERON:0001948!6.63e-07!5;UBERON:0002315!6.63e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.10e-44,34;UBERON:0000073,5.38e-38,54;UBERON:0001017,1.65e-31,73;UBERON:0003528,1.82e-31,29;UBERON:0002791,1.82e-31,29;UBERON:0001893,1.82e-31,29;UBERON:0001016,1.54e-30,75;UBERON:0001049,2.51e-30,52;UBERON:0005068,2.51e-30,52;UBERON:0006241,2.51e-30,52;UBERON:0007135,2.51e-30,52;UBERON:0002021,2.90e-30,10;UBERON:0000411,2.90e-30,10;UBERON:0001950,2.90e-30,10;UBERON:0002346,8.91e-24,64;UBERON:0003075,8.91e-24,64;UBERON:0007284,8.91e-24,64;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002780,1.90e-22,39;UBERON:0001890,1.90e-22,39;UBERON:0006240,1.90e-22,39;UBERON:0003080,8.59e-22,40;UBERON:0002616,6.79e-21,46;UBERON:0002619,1.49e-20,17;UBERON:0000955,2.29e-20,47;UBERON:0006238,2.29e-20,47;UBERON:0010371,2.85e-20,73;UBERON:0000956,2.14e-19,21;UBERON:0001869,2.14e-19,21;UBERON:0000203,2.14e-19,21;UBERON:0003056,4.19e-17,49;UBERON:0001948,2.16e-15,5;UBERON:0002315,2.16e-15,5;UBERON:0010314,4.07e-15,92;UBERON:0002420,1.85e-13,8;UBERON:0007245,1.85e-13,8;UBERON:0010009,1.85e-13,8;UBERON:0010011,1.85e-13,8;UBERON:0000454,1.85e-13,8;UBERON:0002240,8.65e-13,6;UBERON:0005174,8.65e-13,6;UBERON:0001137,8.65e-13,6;UBERON:0000025,2.77e-11,114;UBERON:0002038,1.61e-10,3;UBERON:0009663,1.61e-10,3;UBERON:0009661,1.61e-10,3;UBERON:0000125,1.61e-10,3;UBERON:0002308,1.61e-10,3;UBERON:0004684,1.86e-10,3;UBERON:0002275,1.86e-10,3;UBERON:0004111,3.13e-10,122;UBERON:0002257,1.03e-09,3;UBERON:0003076,6.82e-09,12;UBERON:0003057,6.82e-09,12;UBERON:0011216,1.08e-08,194;UBERON:0002950,5.48e-08,4;UBERON:0001891,5.48e-08,4;UBERON:0009616,5.48e-08,4;UBERON:0010286,5.48e-08,4;UBERON:0002256,2.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.606949382578793,1.05798195854407,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,2.43010688997043,0.630974884054146,2.85650984403804,2.65042249141936,0.489963196859816,0.479227355091182,1.83843757322004,4.40463523997555,2.80912143787413,3.07213066512487,1.05509030184155,2.8361169516747,1.04182674111352,4.74611098302348,4.50210088025344,2.29197371665215,3.53554302568401,1.99320353118744,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,3.35114730901528,0,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0.695297280769106,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0,0,0.689706313300419,0,0.150704817835715,0.0680364991513279,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,5.52390283808612,6.30185064783336,1.54667864109319,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.35942722695261,5.1776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.606949382578793,1.05798195854407,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,2.43010688997043,0.630974884054146,2.85650984403804,2.65042249141936,0.489963196859816,0.479227355091182,1.83843757322004,4.40463523997555,2.80912143787413,3.07213066512487,1.05509030184155,2.8361169516747,1.04182674111352,4.74611098302348,4.50210088025344,2.29197371665215,3.53554302568401,1.99320353118744,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,3.35114730901528,0,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0.695297280769106,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0,0,0.689706313300419,0,0.150704817835715,0.0680364991513279,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,5.52390283808612,6.30185064783336,1.54667864109319,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.35942722695261,5.1776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:175275934..175275941,- | |||
}} | }} |
Latest revision as of 08:07, 5 August 2015
Short description: | p@chr1:175275934..175275941, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:175275934..175275941, - |
Coexpression cluster: | MCL_coexpression_mm9:525 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.70e-40 | 23 |
neuroblast (sensu Vertebrata) | 4.70e-40 | 23 |
neuron | 8.35e-27 | 33 |
neuronal stem cell | 8.35e-27 | 33 |
neuroblast | 8.35e-27 | 33 |
electrically signaling cell | 8.35e-27 | 33 |
electrically responsive cell | 4.11e-22 | 39 |
electrically active cell | 4.11e-22 | 39 |
neural cell | 1.04e-19 | 43 |
ectodermal cell | 3.53e-19 | 44 |
neurectodermal cell | 3.53e-19 | 44 |
embryonic cell | 1.11e-10 | 70 |
neuron of the substantia nigra | 1.61e-10 | 3 |
raphe nuclei neuron | 1.86e-10 | 3 |
neuron of the ventral spinal cord | 1.03e-09 | 3 |
striatum neuron | 2.88e-09 | 3 |
somatic stem cell | 2.26e-07 | 91 |
multi fate stem cell | 2.26e-07 | 91 |
neuron of the dorsal spinal cord | 2.60e-07 | 2 |