FFCP PHASE1:Mm9::chr3:25756325..25756329,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr3:25756325..25756329,- to FFCP PHASE1:Mm9::chr3:25756325..25756329,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=199 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:25756325..25756329,- | |||
|description=CAGE_peak_at_chr3:25756325..25756329,- | |||
|id=chr3:25756325..25756329,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.54e-17!71;UBERON:0003075!1.54e-17!71;UBERON:0007284!1.54e-17!71;UBERON:0000033!9.67e-17!63;UBERON:0003056!2.62e-16!49;UBERON:0001049!5.19e-15!52;UBERON:0005068!5.19e-15!52;UBERON:0006241!5.19e-15!52;UBERON:0007135!5.19e-15!52;UBERON:0000955!3.28e-14!50;UBERON:0006238!3.28e-14!50;UBERON:0002616!2.29e-13!49;UBERON:0003080!7.73e-12!40;UBERON:0002021!1.30e-11!10;UBERON:0000411!1.30e-11!10;UBERON:0001950!1.30e-11!10;UBERON:0002020!2.51e-11!34;UBERON:0002780!3.90e-11!39;UBERON:0001890!3.90e-11!39;UBERON:0006240!3.90e-11!39;UBERON:0004121!7.69e-11!102;UBERON:0000924!7.69e-11!102;UBERON:0006601!7.69e-11!102;UBERON:0001017!1.05e-10!73;UBERON:0005743!1.05e-10!73;UBERON:0002791!1.07e-10!29;UBERON:0003528!1.07e-10!29;UBERON:0001893!1.07e-10!29;UBERON:0007811!1.81e-10!86;UBERON:0000073!4.21e-10!75;UBERON:0001016!4.21e-10!75;UBERON:0000956!1.02e-09!21;UBERON:0001869!1.02e-09!21;UBERON:0000203!1.02e-09!21;UBERON:0000153!2.77e-09!94;UBERON:0002619!7.13e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.76e-24,10;UBERON:0000411,1.76e-24,10;UBERON:0001950,1.76e-24,10;UBERON:0002619,2.52e-14,17;UBERON:0000956,1.51e-11,21;UBERON:0001869,1.51e-11,21;UBERON:0000203,1.51e-11,21;UBERON:0003056,1.44e-10,49;UBERON:0002346,9.98e-10,64;UBERON:0003075,9.98e-10,64;UBERON:0007284,9.98e-10,64;UBERON:0000955,1.46e-08,47;UBERON:0006238,1.46e-08,47;UBERON:0010371,2.14e-08,73;UBERON:0003528,2.80e-08,29;UBERON:0002791,2.80e-08,29;UBERON:0001893,2.80e-08,29;UBERON:0001851,3.50e-08,1;UBERON:0005889,3.50e-08,1;UBERON:0004121,1.36e-07,95;UBERON:0000924,1.36e-07,95;UBERON:0006601,1.36e-07,95;UBERON:0000970,1.61e-07,9;UBERON:0000019,1.61e-07,9;UBERON:0000047,1.61e-07,9;UBERON:0010312,1.61e-07,9;UBERON:0004088,1.61e-07,9;UBERON:0002104,1.61e-07,9;UBERON:0001456,1.61e-07,9;UBERON:0003072,1.61e-07,9;UBERON:0004128,1.61e-07,9;UBERON:0003071,1.61e-07,9;UBERON:0002020,5.19e-07,34;UBERON:0002616,9.32e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0,0,0,0,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,0.449371918214468,0.915001205637253,0,0.521472960576829,1.53429274398198,0.62336413367868,0.973447578406546,0,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.90422890701429,1.7009124787832,3.33095672740609,1.3118241438362,0,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,2.76195141904306,0.572895513439397,1.3748254587495,0.685082519770642,2.2661816921691,1.35004500046361,0.45032120322422,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.37456602987953,0.128050304809739,0.402048282689293,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,1.09756783723664,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0,0,0,0,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,0.449371918214468,0.915001205637253,0,0.521472960576829,1.53429274398198,0.62336413367868,0.973447578406546,0,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.90422890701429,1.7009124787832,3.33095672740609,1.3118241438362,0,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,2.76195141904306,0.572895513439397,1.3748254587495,0.685082519770642,2.2661816921691,1.35004500046361,0.45032120322422,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.37456602987953,0.128050304809739,0.402048282689293,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,1.09756783723664,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr3:25756325..25756329,- | |||
}} | }} |
Latest revision as of 08:05, 6 August 2015
Short description: | p@chr3:25756325..25756329, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:25756325..25756329, - |
Coexpression cluster: | MCL_coexpression_mm9:199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.76e-24 | 10 |
visual cortex | 1.76e-24 | 10 |
neocortex | 1.76e-24 | 10 |
regional part of cerebral cortex | 2.52e-14 | 17 |
cerebral cortex | 1.51e-11 | 21 |
cerebral hemisphere | 1.51e-11 | 21 |
pallium | 1.51e-11 | 21 |
pre-chordal neural plate | 1.44e-10 | 49 |
neurectoderm | 9.98e-10 | 64 |
neural plate | 9.98e-10 | 64 |
presumptive neural plate | 9.98e-10 | 64 |
brain | 1.46e-08 | 47 |
future brain | 1.46e-08 | 47 |
ecto-epithelium | 2.14e-08 | 73 |
brain grey matter | 2.80e-08 | 29 |
regional part of telencephalon | 2.80e-08 | 29 |
telencephalon | 2.80e-08 | 29 |
cortex | 3.50e-08 | 1 |
zygote cortex | 3.50e-08 | 1 |
ectoderm-derived structure | 1.36e-07 | 95 |
ectoderm | 1.36e-07 | 95 |
presumptive ectoderm | 1.36e-07 | 95 |
eye | 1.61e-07 | 9 |
camera-type eye | 1.61e-07 | 9 |
simple eye | 1.61e-07 | 9 |
immature eye | 1.61e-07 | 9 |
ocular region | 1.61e-07 | 9 |
visual system | 1.61e-07 | 9 |
face | 1.61e-07 | 9 |
optic cup | 1.61e-07 | 9 |
optic vesicle | 1.61e-07 | 9 |
eye primordium | 1.61e-07 | 9 |
gray matter | 5.19e-07 | 34 |
regional part of brain | 9.32e-07 | 46 |