Personal tools

FFCP PHASE1:Mm9::chr3:60333488..60333503,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:60333488..60333503,+
|DHSsupport=NA
|short_description=p5@Mbnl1
|DPIdataset=NA
|description=CAGE_peak_5_at_Mbnl1_5end
|association_with_transcript=417bp_to_ENSMUST00000076983_5end
|EntrezGene=56758
|EntrezGene=56758
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9JKP5
|UniProt=Q9JKP5
|association_with_transcript=417bp_to_ENSMUST00000076983_5end
|cluster_id=chr3:60333488..60333503,+
|description=CAGE_peak_5_at_Mbnl1_5end
|id=chr3:60333488..60333503,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.30e-17!193;UBERON:0004120!3.30e-17!193;UBERON:0006603!3.30e-17!193;UBERON:0003104!7.72e-12!131;UBERON:0009142!7.72e-12!131;UBERON:0001048!1.08e-10!147;UBERON:0001041!2.08e-10!92;UBERON:0000077!5.33e-10!97;UBERON:0009569!2.84e-08!66;UBERON:0005057!1.29e-07!51;UBERON:0004921!1.49e-07!126;UBERON:0004185!1.49e-07!126;UBERON:0003081!4.08e-07!88;UBERON:0002405!5.45e-07!70;UBERON:0001007!7.49e-07!128;UBERON:0001555!7.49e-07!128;UBERON:0007026!7.49e-07!128;UBERON:0000065!9.18e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0001041,4.41e-12,80;UBERON:0001048,2.23e-11,134;UBERON:0000926,1.75e-09,120;UBERON:0004120,1.75e-09,120;UBERON:0006603,1.75e-09,120;UBERON:0004921,1.77e-08,114;UBERON:0009569,2.29e-08,66;UBERON:0001007,1.21e-07,116;UBERON:0001555,1.21e-07,116;UBERON:0007026,1.21e-07,116;UBERON:0005177,1.96e-07,79;UBERON:0004119,4.71e-07,118;UBERON:0000925,4.71e-07,118;UBERON:0006595,4.71e-07,118;UBERON:0000065,6.16e-07,41;UBERON:0003081,7.90e-07,87;UBERON:0001004,8.38e-07,42
|phase1_expression=2.88267924788629,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.934450562382103,1.80772652818207,28.298533152485,1.17032263160997,7.70480857014772,1.59544317990673,14.2096605842901,1.66098764596095,7.32841475994458,9.92128810210147,11.1929900500503,13.5648731104042,12.7516423253337,10.1853516431527,1.27564935226605,8.34043990087437,7.57479388502913,0.639969691173627,0.45881856213434,0.57423196411502,0,0.861884930743556,0.380046838912748,0.504060259519861,0.221730510655305,0,0.61506478758457,0,2.02196133825892,3.49092755252834,1.22501613757421,7.53356935326434,5.4693474116666,8.89990364755457,5.29408339227913,6.83045484958446,6.311634589405,1.25896817975577,1.01376931219515,1.83546752161682,0,0,0.219686182734472,0.194429899074283,2.37976916763116,0,9.06026072711776,12.3311564141929,16.4685961579807,2.05807548828758,4.29800159908135,2.06268836910977,0.404632921719196,2.11596391708813,0,0.338844532069132,1.77858959222228,0.899899717281399,0,1.4209602298922,1.19840044207362,0.768436610643109,0.414758449233911,0.540023753326763,0.420649922702764,0.571301968807607,1.76694832761291,0.244981598429908,0.383381884072945,0,0,2.17068474744819,0.921639199537461,0.131886287730194,1.00636407962651,0.52091337055676,0.837548997004143,0.56276261003168,1.37518422999129,0.294628585473668,1.42371680799103,1.3047961207771,3.63485727999283,1.96486056277642,2.6087803983151,0.860423876981386,0,3.77792234146472,3.89865850468601,2.68816132258401,0.983110940922263,2.89731548382698,1.55871602761721,1.06001872353102,2.53518155598025,0,2.54805239706646,0,3.68034769719064,3.29367825117628,4.54972000513305,1.25602267690966,11.6522047641227,16.3286352971307,7.63335437770998,5.1759131313064,10.3776973765226,9.64624899536784,10.9357497636205,15.0799909595611,1.97755974187499,11.2787498397531,4.42305275974937,10.0295446967394,12.367125033782,16.9706338597328,7.45567044872489,7.61230072230023,8.16842156572475,6.38642638021478,8.14742846640258,7.19883277192089,10.5468288470644,3.89455662452539,3.20250421973039,1.50785222535437,4.86708096538374,5.8814555185976,4.57133698031032,6.81413304884582,5.09196819251581,11.4454412961286,4.54900965180614,7.57590681191306,1.82168620147785,1.83921683546778,2.34080768746954,1.20563854268572,3.40182495756639,3.33095672740609,3.09215691047105,6.98499100995342,1.94011193639558,2.64748512234947,4.04687585577082,5.04150184583422,5.83899223373756,6.268538997399,8.23128545631774,4.17971960318836,9.83098462238529,9.77922047035918,17.0498099637356,5.79952163099405,3.51789089971644,4.8616756594474,4.26140524053378,3.73852040320067,5.55361606394562,5.11574678450897,7.77992864058896,6.07179780309281,5.26591519723137,12.8050621981694,13.4574223846121,15.9357986293612,13.173006917463,11.541752013392,2.52347938276953,2.36680608472354,1.32167513193519,1.05780226665418,4.47905326123991,4.87697010906921,4.89696353023955,4.43703754171354,4.66993892074228,4.94586627892654,8.54152310780121,5.27036655116835,9.29940272560997,10.9426059622633,9.35827618171777,8.08937467788799,8.64552199498777,8.56307474993779,1.32767530667157,4.34144347916969,0,4.48032921259691,3.49114476901726,3.71719845418688,4.48979413582227,6.19962621514329,6.12295038581362,4.31890073726302,8.00422093135302,9.17648081438517,8.05891879964132,14.8408994174003,8.11440485554012,5.30589751455317,4.07401362850272,5.75392274901621,13.4572238223279,14.5517548989683,15.814502718009,8.93138274404408,12.4815069245824,5.80931419278357,6.45830688678884,10.6137574699941,8.49864674766381,1.32643988239339,6.35563408123901,6.95954851678271,13.1426539041561,5.69521275302174,7.37935286746643,14.4398899414771,7.88175720530955,12.6234873099802,9.8861956567642,9.5040722535128,16.9231282228578,16.6346417368738,1.50791283939272,2.71952841909355,4.42587845717133,4.41498794087572,5.45872005958493,6.56385444916338,4.42624352517024,38.1231100078603,1.57754109708128,0.390438744296638,0.215423397732799,1.43381278771531,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,1.18586333383957,1.92792789853084,4.9679029822894,5.34196811001766,6.02681749608232,5.1140738121486,5.30980553359851,2.42780636154981,3.02323556964751,3.77210159511796,0.590603785761546,4.91896236710284,6.46070732920553,8.36127577798263,5.34746067577082,8.53299246426703,1.05418608574999,1.03135543248187,9.53230896110606,1.08036656418786,0.905510786479282,1.92903331528433,2.6601035046341,1.96205699362278,4.44282355625727,2.13125464380219,2.11204537257339,0.63549621259146,2.20528398054962,3.46261131177108,9.04200789497071,11.2785169615651,10.7435109602823,7.87876318776294,8.74442509889552,11.1255181206306,12.9861869406368,8.2554747185289,10.0005044779644,16.9531611304222,19.4105803363856,16.0144721244566,9.85874893964361,9.51669875800874,9.67399816630967,7.63736494412091,2.05618395827738,4.26970880966382,6.04829908602087,8.78170843260769,6.55087691238533,6.74321731924104,7.76942483818158,8.11443420150492,8.55458823725833,4.34937519160848,0.56369293868419,4.33597983527538,3.80554528051325,5.83353565032143,6.19967152693109,7.7719817725758,9.27122185301456,5.9894017028217,4.50895181030557,3.14059357073808,6.33666013767304,5.05617793005085,6.89265731986558,10.4765176308124,11.8227948909793,5.90788095702689,7.74857283646933,12.6205221995967,20.3811547500917,14.1353029927407,12.878950324695,16.5354943624418,14.8135978724424,19.1461564864256,16.4796432076012,12.0167103316062,0,0.0897138566094757,0.671538465456314,12.7505132061246,5.81815673898664,5.31139710375069,7.93163002592544,7.02200945649509,1.12950368523413,2.76195141904306,1.71868654031819,2.23409137046794,0.685082519770642,0.755393897389701,1.35004500046361,4.95353323546643,2.71885445390523,1.03552062350364,1.3492355185943,0.798049746802062,3.75613932659095,5.10524105843418,2.72497111416377,3.12533964365024,2.66696073361938,5.35691148821125,3.85103051510178,3.03236654116557,3.29523089857312,4.33840585187975,5.61849044819294,4.35371036353111,6.37533705407307,2.85776214769844,5.09891034157364,5.01563973205633,4.53294490883637,3.82717192349433,1.71434626192708,3.37204031702741,4.29185141905178,3.63366041580821,3.10560955370591,5.58456412085065,7.86590283352922,3.15683653725411,5.43216455383447,1.12228454331548,1.42362021749009,4.0386837773981,3.27384834535751,6.19747364743864,5.20847849649082,2.99772693525535,4.21076895201735,4.72716318906256,4.97349663378993,7.27951683094401,7.65163857547391
|phase1_expression=2.88267924788629,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.934450562382103,1.80772652818207,28.298533152485,1.17032263160997,7.70480857014772,1.59544317990673,14.2096605842901,1.66098764596095,7.32841475994458,9.92128810210147,11.1929900500503,13.5648731104042,12.7516423253337,10.1853516431527,1.27564935226605,8.34043990087437,7.57479388502913,0.639969691173627,0.45881856213434,0.57423196411502,0,0.861884930743556,0.380046838912748,0.504060259519861,0.221730510655305,0,0.61506478758457,0,2.02196133825892,3.49092755252834,1.22501613757421,7.53356935326434,5.4693474116666,8.89990364755457,5.29408339227913,6.83045484958446,6.311634589405,1.25896817975577,1.01376931219515,1.83546752161682,0,0,0.219686182734472,0.194429899074283,2.37976916763116,0,9.06026072711776,12.3311564141929,16.4685961579807,2.05807548828758,4.29800159908135,2.06268836910977,0.404632921719196,2.11596391708813,0,0.338844532069132,1.77858959222228,0.899899717281399,0,1.4209602298922,1.19840044207362,0.768436610643109,0.414758449233911,0.540023753326763,0.420649922702764,0.571301968807607,1.76694832761291,0.244981598429908,0.383381884072945,0,0,2.17068474744819,0.921639199537461,0.131886287730194,1.00636407962651,0.52091337055676,0.837548997004143,0.56276261003168,1.37518422999129,0.294628585473668,1.42371680799103,1.3047961207771,3.63485727999283,1.96486056277642,2.6087803983151,0.860423876981386,0,3.77792234146472,3.89865850468601,2.68816132258401,0.983110940922263,2.89731548382698,1.55871602761721,1.06001872353102,2.53518155598025,0,2.54805239706646,0,3.68034769719064,3.29367825117628,4.54972000513305,1.25602267690966,11.6522047641227,16.3286352971307,7.63335437770998,5.1759131313064,10.3776973765226,9.64624899536784,10.9357497636205,15.0799909595611,1.97755974187499,11.2787498397531,4.42305275974937,10.0295446967394,12.367125033782,16.9706338597328,7.45567044872489,7.61230072230023,8.16842156572475,6.38642638021478,8.14742846640258,7.19883277192089,10.5468288470644,3.89455662452539,3.20250421973039,1.50785222535437,4.86708096538374,5.8814555185976,4.57133698031032,6.81413304884582,5.09196819251581,11.4454412961286,4.54900965180614,7.57590681191306,1.82168620147785,1.83921683546778,2.34080768746954,1.20563854268572,3.40182495756639,3.33095672740609,3.09215691047105,6.98499100995342,1.94011193639558,2.64748512234947,4.04687585577082,5.04150184583422,5.83899223373756,6.268538997399,8.23128545631774,4.17971960318836,9.83098462238529,9.77922047035918,17.0498099637356,5.79952163099405,3.51789089971644,4.8616756594474,4.26140524053378,3.73852040320067,5.55361606394562,5.11574678450897,7.77992864058896,6.07179780309281,5.26591519723137,12.8050621981694,13.4574223846121,15.9357986293612,13.173006917463,11.541752013392,2.52347938276953,2.36680608472354,1.32167513193519,1.05780226665418,4.47905326123991,4.87697010906921,4.89696353023955,4.43703754171354,4.66993892074228,4.94586627892654,8.54152310780121,5.27036655116835,9.29940272560997,10.9426059622633,9.35827618171777,8.08937467788799,8.64552199498777,8.56307474993779,1.32767530667157,4.34144347916969,0,4.48032921259691,3.49114476901726,3.71719845418688,4.48979413582227,6.19962621514329,6.12295038581362,4.31890073726302,8.00422093135302,9.17648081438517,8.05891879964132,14.8408994174003,8.11440485554012,5.30589751455317,4.07401362850272,5.75392274901621,13.4572238223279,14.5517548989683,15.814502718009,8.93138274404408,12.4815069245824,5.80931419278357,6.45830688678884,10.6137574699941,8.49864674766381,1.32643988239339,6.35563408123901,6.95954851678271,13.1426539041561,5.69521275302174,7.37935286746643,14.4398899414771,7.88175720530955,12.6234873099802,9.8861956567642,9.5040722535128,16.9231282228578,16.6346417368738,1.50791283939272,2.71952841909355,4.42587845717133,4.41498794087572,5.45872005958493,6.56385444916338,4.42624352517024,38.1231100078603,1.57754109708128,0.390438744296638,0.215423397732799,1.43381278771531,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,1.18586333383957,1.92792789853084,4.9679029822894,5.34196811001766,6.02681749608232,5.1140738121486,5.30980553359851,2.42780636154981,3.02323556964751,3.77210159511796,0.590603785761546,4.91896236710284,6.46070732920553,8.36127577798263,5.34746067577082,8.53299246426703,1.05418608574999,1.03135543248187,9.53230896110606,1.08036656418786,0.905510786479282,1.92903331528433,2.6601035046341,1.96205699362278,4.44282355625727,2.13125464380219,2.11204537257339,0.63549621259146,2.20528398054962,3.46261131177108,9.04200789497071,11.2785169615651,10.7435109602823,7.87876318776294,8.74442509889552,11.1255181206306,12.9861869406368,8.2554747185289,10.0005044779644,16.9531611304222,19.4105803363856,16.0144721244566,9.85874893964361,9.51669875800874,9.67399816630967,7.63736494412091,2.05618395827738,4.26970880966382,6.04829908602087,8.78170843260769,6.55087691238533,6.74321731924104,7.76942483818158,8.11443420150492,8.55458823725833,4.34937519160848,0.56369293868419,4.33597983527538,3.80554528051325,5.83353565032143,6.19967152693109,7.7719817725758,9.27122185301456,5.9894017028217,4.50895181030557,3.14059357073808,6.33666013767304,5.05617793005085,6.89265731986558,10.4765176308124,11.8227948909793,5.90788095702689,7.74857283646933,12.6205221995967,20.3811547500917,14.1353029927407,12.878950324695,16.5354943624418,14.8135978724424,19.1461564864256,16.4796432076012,12.0167103316062,0,0.0897138566094757,0.671538465456314,12.7505132061246,5.81815673898664,5.31139710375069,7.93163002592544,7.02200945649509,1.12950368523413,2.76195141904306,1.71868654031819,2.23409137046794,0.685082519770642,0.755393897389701,1.35004500046361,4.95353323546643,2.71885445390523,1.03552062350364,1.3492355185943,0.798049746802062,3.75613932659095,5.10524105843418,2.72497111416377,3.12533964365024,2.66696073361938,5.35691148821125,3.85103051510178,3.03236654116557,3.29523089857312,4.33840585187975,5.61849044819294,4.35371036353111,6.37533705407307,2.85776214769844,5.09891034157364,5.01563973205633,4.53294490883637,3.82717192349433,1.71434626192708,3.37204031702741,4.29185141905178,3.63366041580821,3.10560955370591,5.58456412085065,7.86590283352922,3.15683653725411,5.43216455383447,1.12228454331548,1.42362021749009,4.0386837773981,3.27384834535751,6.19747364743864,5.20847849649082,2.99772693525535,4.21076895201735,4.72716318906256,4.97349663378993,7.27951683094401,7.65163857547391
|short_description=p5@Mbnl1
}}
}}

Latest revision as of 15:25, 25 September 2015

Short description:p5@Mbnl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Mbnl1_5end
Coexpression cluster:NA
Association with transcript: 417bp_to_ENSMUST00000076983_5end
EntrezGene:Mbnl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Mbnl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E728.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.21
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.06
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.47
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D716.33
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F59.65
adrenal gland, neonate N00.CNhs11191.1311-23C110.94
adrenal gland, neonate N25.CNhs11223.1377-27I315.08
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H111.28
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.55
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.45
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.05
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G112.81
heart, neonate N16.CNhs11209.782-15G113.46
heart, neonate N20.CNhs11127.821-26I615.94
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D211.54
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F84.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I16.20
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E114.84
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F413.46
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C614.44
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C716.92
lung, neonate N30.CNhs11133.1394-42H216.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C238.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H311.28
skin, neonate N06.CNhs11097.693-20I510.74
skin, neonate N10.CNhs11108.762-6C47.88
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G212.99
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F210.00
spleen, neonate N10.CNhs11116.752-24D116.95
spleen, neonate N20.CNhs11112.824-19H119.41
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.67
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A97.77
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I18.55
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B79.27
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I210.48
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G47.75
thymus, neonate N02.CNhs11181.1541-43F812.62
thymus, neonate N03.CNhs11137.2104-43C720.38
thymus, neonate N06.CNhs11197.681-26C414.14
thymus, neonate N07.CNhs11211.713-19D312.88
thymus, neonate N10.CNhs11194.748-24E416.54
thymus, neonate N20.CNhs11186.820-7A214.81
thymus, neonate N25.CNhs11125.1362-25G719.15
thymus, neonate N30.CNhs11132.1393-42G216.48
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E412.75
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
foregut4.41e-1280
primordium2.23e-11134
mesoderm1.75e-09120
mesoderm-derived structure1.75e-09120
presumptive mesoderm1.75e-09120
subdivision of digestive tract1.77e-08114
subdivision of trunk2.29e-0866
digestive system1.21e-07116
digestive tract1.21e-07116
primitive gut1.21e-07116
trunk region element1.96e-0779
endoderm-derived structure4.71e-07118
endoderm4.71e-07118
presumptive endoderm4.71e-07118
respiratory tract6.16e-0741
lateral plate mesoderm7.90e-0787
respiratory system8.38e-0742
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:60333488..60333503,%2B&oldid=4199133"