FFCP PHASE1:Mm9::chr5:106129233..106129242,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:106129233..106129242,+ to FFCP PHASE1:Mm9::chr5:106129233..106129242,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=231549 | |EntrezGene=231549 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGR2 | |UniProt=Q8BGR2 | ||
|association_with_transcript=245bp_to_ENSMUST00000060531,NM_001122768,uc008ylg.2_5end | |||
|cluster_id=chr5:106129233..106129242,+ | |||
|description=CAGE_peak_18_at_Lrrc8d_5end | |||
|id=chr5:106129233..106129242,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.83e-07!6;CL:0000677!2.83e-07!6;CL:0000212!2.83e-07!6;CL:0000584!2.83e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.40e-15,6;CL:0000677,8.40e-15,6;CL:0000584,8.40e-15,6;CL:0000075,1.00e-12,7;CL:0002563,5.99e-10,9;CL:0002251,5.99e-10,9;CL:0000682,5.45e-08,3;CL:0000066,2.00e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.94e-11!15;UBERON:0001242!1.12e-09!13;UBERON:0000060!1.12e-09!13;UBERON:0001262!1.12e-09!13;UBERON:0004786!1.12e-09!13;UBERON:0000160!1.39e-09!43;UBERON:0005409!3.25e-08!59;UBERON:0004923!1.45e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-33,31;UBERON:0005409,1.33e-21,47;UBERON:0001242,2.22e-20,13;UBERON:0001262,2.22e-20,13;UBERON:0004786,2.22e-20,13;UBERON:0000344,1.37e-17,15;UBERON:0002108,2.20e-13,4;UBERON:0004923,9.11e-11,24;UBERON:0003350,5.99e-10,9;UBERON:0004808,5.99e-10,9;UBERON:0001277,5.99e-10,9;UBERON:0000331,2.00e-08,3;UBERON:0002116,2.00e-08,3;UBERON:0001204,2.00e-08,3;UBERON:0001168,2.00e-08,3;UBERON:0000485,3.56e-08,11;UBERON:0004921,7.95e-08,114;UBERON:0001007,1.17e-07,116;UBERON:0001555,1.17e-07,116;UBERON:0007026,1.17e-07,116;UBERON:0004119,1.71e-07,118;UBERON:0000925,1.71e-07,118;UBERON:0006595,1.71e-07,118 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,1.51232105653415,2.50447864973174,0.503637815735669,0.467225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,1.14846392823004,1.7230479846363,0.646413698057667,3.04037471130198,1.51218077855958,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.506719730950197,0,0.11418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.04365644166873,0.11981512450592,0,0,0,0.457500602818626,0,0,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,7.59963200862735,2.3800550999719,0,0,0,0.403367049246685,0.22237804384487,0,1.42358718463353,0.494096864172033,0.251335208800269,0,0.58489226135736,2.69645822596266,2.16138049874694,2.38969527905241,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0.339956859987711,0,0.414599921413271,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.518459893167171,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.665957860122194,0.358855426437903,0.167884616364078,0,0,0,0.214368379079066,0,0,0.920650473014354,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.39590163055744,1.81999695755814,1.51232105653415,2.50447864973174,0.503637815735669,0.467225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,1.14846392823004,1.7230479846363,0.646413698057667,3.04037471130198,1.51218077855958,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.506719730950197,0,0.11418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.04365644166873,0.11981512450592,0,0,0,0.457500602818626,0,0,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,7.59963200862735,2.3800550999719,0,0,0,0.403367049246685,0.22237804384487,0,1.42358718463353,0.494096864172033,0.251335208800269,0,0.58489226135736,2.69645822596266,2.16138049874694,2.38969527905241,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0.339956859987711,0,0.414599921413271,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.518459893167171,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.665957860122194,0.358855426437903,0.167884616364078,0,0,0,0.214368379079066,0,0,0.920650473014354,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p18@Lrrc8d | |||
}} | }} |
Latest revision as of 13:44, 1 October 2015
Short description: | p18@Lrrc8d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Lrrc8d_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 245bp_to_ENSMUST00000060531, NM_001122768, uc008ylg.2_5end |
EntrezGene: | Lrrc8d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.40e-15 | 6 |
gut absorptive cell | 8.40e-15 | 6 |
enterocyte | 8.40e-15 | 6 |
columnar/cuboidal epithelial cell | 1.00e-12 | 7 |
intestinal epithelial cell | 5.99e-10 | 9 |
epithelial cell of alimentary canal | 5.99e-10 | 9 |
M cell of gut | 5.45e-08 | 3 |
epithelial cell | 2.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-33 | 31 |
gastrointestinal system | 1.33e-21 | 47 |
intestinal mucosa | 2.22e-20 | 13 |
wall of intestine | 2.22e-20 | 13 |
gastrointestinal system mucosa | 2.22e-20 | 13 |
mucosa | 1.37e-17 | 15 |
small intestine | 2.20e-13 | 4 |
organ component layer | 9.11e-11 | 24 |
epithelium of mucosa | 5.99e-10 | 9 |
gastrointestinal system epithelium | 5.99e-10 | 9 |
intestinal epithelium | 5.99e-10 | 9 |
ileal mucosa | 2.00e-08 | 3 |
ileum | 2.00e-08 | 3 |
mucosa of small intestine | 2.00e-08 | 3 |
wall of small intestine | 2.00e-08 | 3 |
simple columnar epithelium | 3.56e-08 | 11 |
subdivision of digestive tract | 7.95e-08 | 114 |
digestive system | 1.17e-07 | 116 |
digestive tract | 1.17e-07 | 116 |
primitive gut | 1.17e-07 | 116 |
endoderm-derived structure | 1.71e-07 | 118 |
endoderm | 1.71e-07 | 118 |
presumptive endoderm | 1.71e-07 | 118 |