FFCP PHASE1:Mm9::chr12:103592955..103592964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217835 | |EntrezGene=217835 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000131076,ENSMUST00000137249_5end | |association_with_transcript=0bp_to_ENSMUST00000131076,ENSMUST00000137249_5end | ||
|cluster_id=chr12:103592955..103592964,+ | |||
|description=CAGE_peak_8_at_Rin3_5end | |description=CAGE_peak_8_at_Rin3_5end | ||
|id=chr12:103592955..103592964,+ | |id=chr12:103592955..103592964,+ | ||
|ontology_enrichment_celltype=CL:0000049!7.78e-09!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.57e-17,19;CL:0000763,2.37e-14,16;CL:0000553,4.56e-13,6;CL:0000556,4.56e-13,6;CL:0000988,1.53e-11,32;CL:0002032,1.53e-11,32;CL:0000037,1.53e-11,32;CL:0000837,1.53e-11,32;CL:0000839,5.06e-11,13;CL:0000050,1.28e-08,9;CL:0002320,2.45e-07,46;CL:0000134,2.45e-07,46;CL:0000557,3.51e-07,7;CL:0002476,3.99e-07,2;CL:0002031,7.14e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.94e-11,3;DOID:4045,4.94e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!3.76e-10!70;UBERON:0001474!4.26e-08!22;UBERON:0004765!4.26e-08!22;UBERON:0001434!4.26e-08!22;UBERON:0002193!1.60e-07!48;UBERON:0002204!2.06e-07!32;UBERON:0002106!3.45e-07!6;UBERON:0004457!3.45e-07!6;UBERON:0000042!3.45e-07!6;UBERON:0004854!3.45e-07!6;UBERON:0009034!3.45e-07!6;UBERON:0002095!3.45e-07!6;UBERON:0004782!3.45e-07!6;UBERON:0003281!3.45e-07!6;UBERON:0009664!3.45e-07!6;UBERON:0002296!3.45e-07!6;UBERON:0005602!3.45e-07!6;UBERON:0001179!3.45e-07!6;UBERON:0006293!3.45e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.24e-16,32;UBERON:0001474,5.25e-15,22;UBERON:0004765,5.25e-15,22;UBERON:0001434,5.25e-15,22;UBERON:0002371,2.37e-14,16;UBERON:0002193,5.79e-10,48;UBERON:0002405,5.79e-10,48;UBERON:0002390,4.13e-09,45;UBERON:0003061,4.13e-09,45;UBERON:0002106,2.08e-08,6;UBERON:0004457,2.08e-08,6;UBERON:0000042,2.08e-08,6;UBERON:0004854,2.08e-08,6;UBERON:0009034,2.08e-08,6;UBERON:0002095,2.08e-08,6;UBERON:0004782,2.08e-08,6;UBERON:0003281,2.08e-08,6;UBERON:0009664,2.08e-08,6;UBERON:0002296,2.08e-08,6;UBERON:0005602,2.08e-08,6;UBERON:0001179,2.08e-08,6;UBERON:0006293,2.08e-08,6;UBERON:0003887,1.40e-07,10;UBERON:0002384,2.45e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,0,7.72882305127682,5.07323404341233,4.2438965179803,0.0850432901510698,0.297872853602656,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,15.0671387065287,8.5946887897618,11.5175223674236,18.8234076169925,12.294818729252,10.1957174136542,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,9.32176381129818,0,0,0,0,0,0,0,0,0.578397427679647,3.5384422077995,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0,0,0.718890747035522,1.19980546198682,1.14363204365758,0,0,0,0,0,0,0,0,2.11491850037158,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.51469581422943,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0.482354319504834,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0,0,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,1.50791283939272,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,2.22132145037209,0.206386867963223,2.03713980106683,1.31857919903284,1.36694227721025,0.686334519619568,0.509935289981566,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0.661774257358546,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,0,7.72882305127682,5.07323404341233,4.2438965179803,0.0850432901510698,0.297872853602656,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,15.0671387065287,8.5946887897618,11.5175223674236,18.8234076169925,12.294818729252,10.1957174136542,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,9.32176381129818,0,0,0,0,0,0,0,0,0.578397427679647,3.5384422077995,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0,0,0.718890747035522,1.19980546198682,1.14363204365758,0,0,0,0,0,0,0,0,2.11491850037158,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.51469581422943,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0.482354319504834,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0,0,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,1.50791283939272,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,2.22132145037209,0.206386867963223,2.03713980106683,1.31857919903284,1.36694227721025,0.686334519619568,0.509935289981566,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0.661774257358546,0.463735671240843 | ||
|short_description=p8@Rin3 | |short_description=p8@Rin3 | ||
}} | }} |
Latest revision as of 05:09, 26 September 2015
Short description: | p8@Rin3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rin3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000131076, ENSMUST00000137249_5end |
EntrezGene: | Rin3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.57e-17 | 19 |
myeloid cell | 2.37e-14 | 16 |
megakaryocyte progenitor cell | 4.56e-13 | 6 |
megakaryocyte | 4.56e-13 | 6 |
hematopoietic cell | 1.53e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.53e-11 | 32 |
hematopoietic stem cell | 1.53e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.53e-11 | 32 |
myeloid lineage restricted progenitor cell | 5.06e-11 | 13 |
megakaryocyte-erythroid progenitor cell | 1.28e-08 | 9 |
connective tissue cell | 2.45e-07 | 46 |
mesenchymal cell | 2.45e-07 | 46 |
granulocyte monocyte progenitor cell | 3.51e-07 | 7 |
bone marrow macrophage | 3.99e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 7.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.24e-16 | 32 |
bone element | 5.25e-15 | 22 |
skeletal element | 5.25e-15 | 22 |
skeletal system | 5.25e-15 | 22 |
bone marrow | 2.37e-14 | 16 |
hemolymphoid system | 5.79e-10 | 48 |
immune system | 5.79e-10 | 48 |
hematopoietic system | 4.13e-09 | 45 |
blood island | 4.13e-09 | 45 |
spleen | 2.08e-08 | 6 |
cavity lining | 2.08e-08 | 6 |
serous membrane | 2.08e-08 | 6 |
gastrointestinal system mesentery | 2.08e-08 | 6 |
stomach region | 2.08e-08 | 6 |
mesentery | 2.08e-08 | 6 |
gastrointestinal system serosa | 2.08e-08 | 6 |
mesentery of stomach | 2.08e-08 | 6 |
gut mesentery | 2.08e-08 | 6 |
dorsal mesentery | 2.08e-08 | 6 |
dorsal mesogastrium | 2.08e-08 | 6 |
peritoneal cavity | 2.08e-08 | 6 |
spleen primordium | 2.08e-08 | 6 |
intraembryonic coelom | 1.40e-07 | 10 |
connective tissue | 2.45e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.94e-11 | 3 |
muscle cancer | 4.94e-11 | 3 |