FFCP PHASE1:Mm9::chr12:114667453..114667463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=P01864 | |UniProt=P01864 | ||
|association_with_transcript=-109bp_to_uc007pgf.1,uc007pgl.1_5end | |association_with_transcript=-109bp_to_uc007pgf.1,uc007pgl.1_5end | ||
|cluster_id=chr12:114667453..114667463,- | |||
|description=CAGE_peak_4_at_uc007pgf.1_5end,CAGE_peak_4_at_uc007pgl.1_5end | |description=CAGE_peak_4_at_uc007pgf.1_5end,CAGE_peak_4_at_uc007pgl.1_5end | ||
|id=chr12:114667453..114667463,- | |id=chr12:114667453..114667463,- | ||
|ontology_enrichment_celltype=CL:0000553!1.70e-13!6;CL:0000556!1.70e-13!6;CL:0000050!7.20e-09!9;CL:0000414!3.50e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.55e-26,6;CL:0000556,1.55e-26,6;CL:0000050,5.14e-18,9;CL:0000839,9.58e-13,13;CL:0000763,1.65e-10,16;CL:0000049,5.65e-09,19;CL:0002031,5.38e-07,25;CL:0002027,5.46e-07,3;CL:0002006,5.46e-07,3;CL:0002024,5.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.16e-13!10;UBERON:0002106!2.15e-12!6;UBERON:0004457!2.15e-12!6;UBERON:0000042!2.15e-12!6;UBERON:0004854!2.15e-12!6;UBERON:0009034!2.15e-12!6;UBERON:0002095!2.15e-12!6;UBERON:0004782!2.15e-12!6;UBERON:0003281!2.15e-12!6;UBERON:0009664!2.15e-12!6;UBERON:0002296!2.15e-12!6;UBERON:0005602!2.15e-12!6;UBERON:0001179!2.15e-12!6;UBERON:0006293!2.15e-12!6;UBERON:0002193!1.67e-09!48;UBERON:0002465!2.37e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.15e-19,1;UBERON:0001097,5.15e-19,1;UBERON:0003968,5.15e-19,1;UBERON:0001467,5.15e-19,1;UBERON:0002371,1.65e-10,16;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0001474,7.49e-08,22;UBERON:0004765,7.49e-08,22;UBERON:0001434,7.49e-08,22;UBERON:0002465,3.18e-07,3;UBERON:0002390,8.30e-07,45;UBERON:0003061,8.30e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0,1.57731082679119,1.23402990245165,0.84877930359606,0,0.397163804803541,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.616453229534,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.39219233116994,0.206386867963223,0,0.376736914009382,0.683471138605126,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0,1.57731082679119,1.23402990245165,0.84877930359606,0,0.397163804803541,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.616453229534,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.39219233116994,0.206386867963223,0,0.376736914009382,0.683471138605126,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@uc007pgf.1,p4@uc007pgl.1 | |short_description=p4@uc007pgf.1,p4@uc007pgl.1 | ||
}} | }} |
Latest revision as of 10:07, 26 September 2015
Short description: | p4@uc007pgf.1, p4@uc007pgl.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc007pgf.1_5end, CAGE_peak_4_at_uc007pgl.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -109bp_to_uc007pgf.1, uc007pgl.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.55e-26 | 6 |
megakaryocyte | 1.55e-26 | 6 |
megakaryocyte-erythroid progenitor cell | 5.14e-18 | 9 |
myeloid lineage restricted progenitor cell | 9.58e-13 | 13 |
myeloid cell | 1.65e-10 | 16 |
common myeloid progenitor | 5.65e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 5.38e-07 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 5.46e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.46e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.15e-19 | 1 |
axillary lymph node | 5.15e-19 | 1 |
peripheral lymph node | 5.15e-19 | 1 |
shoulder | 5.15e-19 | 1 |
bone marrow | 1.65e-10 | 16 |
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
bone element | 7.49e-08 | 22 |
skeletal element | 7.49e-08 | 22 |
skeletal system | 7.49e-08 | 22 |
lymphoid system | 3.18e-07 | 3 |
hematopoietic system | 8.30e-07 | 45 |
blood island | 8.30e-07 | 45 |