FFCP PHASE1:Mm9::chr13:111071047..111071066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67295 | |EntrezGene=67295 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=F8WIK3 | |UniProt=F8WIK3 | ||
|association_with_transcript=42bp_to_ENSMUST00000022210_5end | |association_with_transcript=42bp_to_ENSMUST00000022210_5end | ||
|cluster_id=chr13:111071047..111071066,- | |||
|description=CAGE_peak_4_at_Rab3c_5end | |description=CAGE_peak_4_at_Rab3c_5end | ||
|id=chr13:111071047..111071066,- | |id=chr13:111071047..111071066,- | ||
|ontology_enrichment_celltype=CL:0000117!1.65e-17!23;CL:0000337!1.65e-17!23;CL:0000540!2.78e-17!33;CL:0000047!2.78e-17!33;CL:0000031!2.78e-17!33;CL:0000404!2.78e-17!33;CL:0000393!6.11e-14!39;CL:0000211!6.11e-14!39;CL:0000221!4.52e-13!44;CL:0000133!4.52e-13!44;CL:0002319!6.01e-13!43;CL:0000055!2.32e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.69e-39,23;CL:0000337,9.69e-39,23;CL:0000540,3.12e-29,33;CL:0000047,3.12e-29,33;CL:0000031,3.12e-29,33;CL:0000404,3.12e-29,33;CL:0000393,3.60e-24,39;CL:0000211,3.60e-24,39;CL:0002319,1.40e-21,43;CL:0000221,5.27e-21,44;CL:0000133,5.27e-21,44;CL:0002321,7.95e-12,70;CL:0002613,1.53e-11,3;CL:0000120,2.63e-11,3;CL:0002610,1.03e-10,3;CL:0002612,2.17e-10,3;CL:0002614,6.01e-10,3;CL:0000723,3.04e-08,91;CL:0000048,3.04e-08,91;CL:0000034,1.66e-07,97;CL:0002611,4.70e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.99e-21!75;UBERON:0001016!2.99e-21!75;UBERON:0001017!1.32e-20!73;UBERON:0005743!1.32e-20!73;UBERON:0002346!4.54e-19!71;UBERON:0003075!4.54e-19!71;UBERON:0007284!4.54e-19!71;UBERON:0004121!2.27e-18!102;UBERON:0000924!2.27e-18!102;UBERON:0006601!2.27e-18!102;UBERON:0001049!2.97e-16!52;UBERON:0005068!2.97e-16!52;UBERON:0006241!2.97e-16!52;UBERON:0007135!2.97e-16!52;UBERON:0000955!1.65e-14!50;UBERON:0006238!1.65e-14!50;UBERON:0002616!3.70e-14!49;UBERON:0000033!2.88e-13!63;UBERON:0002020!1.53e-11!34;UBERON:0003080!8.21e-11!40;UBERON:0003056!2.82e-10!49;UBERON:0002780!4.05e-10!39;UBERON:0001890!4.05e-10!39;UBERON:0006240!4.05e-10!39;UBERON:0002791!4.54e-08!29;UBERON:0003528!4.54e-08!29;UBERON:0001893!4.54e-08!29;UBERON:0002420!3.12e-07!8;UBERON:0007245!3.12e-07!8;UBERON:0010009!3.12e-07!8;UBERON:0010011!3.12e-07!8;UBERON:0000454!3.12e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.22e-23,73;UBERON:0001016,6.90e-23,75;UBERON:0000073,3.54e-20,54;UBERON:0002240,1.76e-18,6;UBERON:0005174,1.76e-18,6;UBERON:0001137,1.76e-18,6;UBERON:0004121,4.25e-17,95;UBERON:0000924,4.25e-17,95;UBERON:0006601,4.25e-17,95;UBERON:0001049,1.84e-16,52;UBERON:0005068,1.84e-16,52;UBERON:0006241,1.84e-16,52;UBERON:0007135,1.84e-16,52;UBERON:0001948,8.27e-16,5;UBERON:0002315,8.27e-16,5;UBERON:0003076,1.26e-15,12;UBERON:0003057,1.26e-15,12;UBERON:0002420,1.02e-14,8;UBERON:0007245,1.02e-14,8;UBERON:0010009,1.02e-14,8;UBERON:0010011,1.02e-14,8;UBERON:0000454,1.02e-14,8;UBERON:0002346,2.27e-14,64;UBERON:0003075,2.27e-14,64;UBERON:0007284,2.27e-14,64;UBERON:0002950,6.81e-13,4;UBERON:0001891,6.81e-13,4;UBERON:0009616,6.81e-13,4;UBERON:0010286,6.81e-13,4;UBERON:0010371,3.97e-12,73;UBERON:0002020,1.35e-11,34;UBERON:0004684,1.03e-10,3;UBERON:0002275,1.03e-10,3;UBERON:0002257,2.17e-10,3;UBERON:0002038,6.01e-10,3;UBERON:0009663,6.01e-10,3;UBERON:0009661,6.01e-10,3;UBERON:0000125,6.01e-10,3;UBERON:0002308,6.01e-10,3;UBERON:0010314,7.82e-09,92;UBERON:0002616,6.87e-08,46;UBERON:0000955,1.13e-07,47;UBERON:0006238,1.13e-07,47;UBERON:0001896,4.07e-07,2;UBERON:0002298,4.07e-07,2;UBERON:0005290,4.07e-07,2;UBERON:0010096,4.07e-07,2;UBERON:0000369,4.57e-07,5;UBERON:0002435,4.57e-07,5;UBERON:0000204,4.57e-07,5;UBERON:0010082,4.57e-07,5;UBERON:0002256,4.70e-07,2 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.514518872071894,0,0,3.64169629547276,4.7609188134483,5.70448263155561,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.630974884054146,1.14260393761521,1.76694832761291,0.734944795289724,0.383381884072945,0,2.20231761998777,2.042997409363,2.4577045320999,5.01167893374737,5.76372154695181,6.77187381723788,2.51264699101243,1.12552522006336,1.37518422999129,1.17851434189467,2.42031857358475,3.35519002485541,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.691846491768175,0.452167921657868,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0.83778682725382,0.255457055208591,0,0,0,1.9472783122627,0.457500602818626,0.251308704225729,0.521472960576829,0.767146371990992,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0.180062129805349,0.753524089178575,0.340182495756639,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,0.617427674275707,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0,0.780534591431195,0,0,0,0.163863314715738,0,0.578596234326046,0,0,0,0,1.44495530989013,1.40654023910644,1.80328439914343,0,0.315508219416257,1.56175497718655,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.354680467284547,0.535106452806212,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,0.31136204275253,0.399024873401031,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,1.28367683836726,0.252697211763798,0,0.377252682772152,0.468207537349412,0.192075457214608,0.459483751644906,0,0.695305955669133,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.953744759789284,0.436039249896986,0.376437521661322,0.592302255241736,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.514518872071894,0,0,3.64169629547276,4.7609188134483,5.70448263155561,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.630974884054146,1.14260393761521,1.76694832761291,0.734944795289724,0.383381884072945,0,2.20231761998777,2.042997409363,2.4577045320999,5.01167893374737,5.76372154695181,6.77187381723788,2.51264699101243,1.12552522006336,1.37518422999129,1.17851434189467,2.42031857358475,3.35519002485541,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.691846491768175,0.452167921657868,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0.83778682725382,0.255457055208591,0,0,0,1.9472783122627,0.457500602818626,0.251308704225729,0.521472960576829,0.767146371990992,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0.180062129805349,0.753524089178575,0.340182495756639,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,0.617427674275707,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0,0.780534591431195,0,0,0,0.163863314715738,0,0.578596234326046,0,0,0,0,1.44495530989013,1.40654023910644,1.80328439914343,0,0.315508219416257,1.56175497718655,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.354680467284547,0.535106452806212,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,0.31136204275253,0.399024873401031,1.02440163452481,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,1.28367683836726,0.252697211763798,0,0.377252682772152,0.468207537349412,0.192075457214608,0.459483751644906,0,0.695305955669133,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.953744759789284,0.436039249896986,0.376437521661322,0.592302255241736,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Rab3c | |short_description=p4@Rab3c | ||
}} | }} |
Latest revision as of 02:33, 27 September 2015
Short description: | p4@Rab3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rab3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 42bp_to_ENSMUST00000022210_5end |
EntrezGene: | Rab3c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.69e-39 | 23 |
neuroblast (sensu Vertebrata) | 9.69e-39 | 23 |
neuron | 3.12e-29 | 33 |
neuronal stem cell | 3.12e-29 | 33 |
neuroblast | 3.12e-29 | 33 |
electrically signaling cell | 3.12e-29 | 33 |
electrically responsive cell | 3.60e-24 | 39 |
electrically active cell | 3.60e-24 | 39 |
neural cell | 1.40e-21 | 43 |
ectodermal cell | 5.27e-21 | 44 |
neurectodermal cell | 5.27e-21 | 44 |
embryonic cell | 7.95e-12 | 70 |
striatum neuron | 1.53e-11 | 3 |
granule cell | 2.63e-11 | 3 |
raphe nuclei neuron | 1.03e-10 | 3 |
neuron of the ventral spinal cord | 2.17e-10 | 3 |
neuron of the substantia nigra | 6.01e-10 | 3 |
somatic stem cell | 3.04e-08 | 91 |
multi fate stem cell | 3.04e-08 | 91 |
stem cell | 1.66e-07 | 97 |
neuron of the dorsal spinal cord | 4.70e-07 | 2 |