FFCP PHASE1:Mm9::chr10:127213430..127213463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=103142 | |EntrezGene=103142 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2527 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K5C8,Q6PHA1 | |UniProt=Q8K5C8,Q6PHA1 | ||
|association_with_transcript=0bp_to_ENSMUST00000052652,ENSMUST00000128133,ENSMUST00000136223,NM_153133,uc007hkp.1_5end | |association_with_transcript=0bp_to_ENSMUST00000052652,ENSMUST00000128133,ENSMUST00000136223,NM_153133,uc007hkp.1_5end | ||
|cluster_id=chr10:127213430..127213463,+ | |||
|description=CAGE_peak_1_at_Rdh9_5end | |description=CAGE_peak_1_at_Rdh9_5end | ||
|id=chr10:127213430..127213463,+ | |id=chr10:127213430..127213463,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.01e-08!6;CL:0000677!2.01e-08!6;CL:0000212!2.01e-08!6;CL:0000584!2.01e-08!6;CL:0000066!6.55e-08!25;CL:0000075!4.64e-07!7;CL:0002563!9.13e-07!9;CL:0002251!9.13e-07!9 | |ontology_enrichment_celltype=CL:0000239!2.01e-08!6;CL:0000677!2.01e-08!6;CL:0000212!2.01e-08!6;CL:0000584!2.01e-08!6;CL:0000066!6.55e-08!25;CL:0000075!4.64e-07!7;CL:0002563!9.13e-07!9;CL:0002251!9.13e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.33e-11,6;CL:0000677,2.33e-11,6;CL:0000584,2.33e-11,6;CL:0000066,1.79e-10,25;CL:0000075,1.27e-09,7;CL:0000223,6.82e-08,20;CL:0002563,2.63e-07,9;CL:0002251,2.63e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.14e-14!43;UBERON:0000344!1.12e-13!15;UBERON:0009854!4.59e-13!23;UBERON:0009856!4.59e-13!23;UBERON:0001007!1.23e-12!128;UBERON:0001555!1.23e-12!128;UBERON:0007026!1.23e-12!128;UBERON:0004119!3.09e-12!130;UBERON:0000925!3.09e-12!130;UBERON:0006595!3.09e-12!130;UBERON:0002107!3.97e-12!22;UBERON:0007499!3.97e-12!22;UBERON:0006925!3.97e-12!22;UBERON:0009497!3.97e-12!22;UBERON:0000015!3.97e-12!22;UBERON:0002423!3.97e-12!22;UBERON:0006235!3.97e-12!22;UBERON:0008835!3.97e-12!22;UBERON:0003894!3.97e-12!22;UBERON:0004161!3.97e-12!22;UBERON:0008836!3.97e-12!22;UBERON:0001242!1.16e-11!13;UBERON:0000060!1.16e-11!13;UBERON:0001262!1.16e-11!13;UBERON:0004786!1.16e-11!13;UBERON:0005409!1.60e-11!59;UBERON:0004921!2.29e-11!126;UBERON:0004185!2.29e-11!126;UBERON:0002365!4.01e-10!25;UBERON:0002330!4.01e-10!25;UBERON:0003929!1.53e-08!55;UBERON:0004923!3.57e-07!24;UBERON:0003350!9.13e-07!9;UBERON:0004808!9.13e-07!9;UBERON:0001277!9.13e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-22,31;UBERON:0001007,2.01e-17,116;UBERON:0001555,2.01e-17,116;UBERON:0007026,2.01e-17,116;UBERON:0009854,4.88e-17,23;UBERON:0009856,4.88e-17,23;UBERON:0004119,5.72e-17,118;UBERON:0000925,5.72e-17,118;UBERON:0006595,5.72e-17,118;UBERON:0000344,8.49e-17,15;UBERON:0005409,5.30e-16,47;UBERON:0002107,1.01e-15,22;UBERON:0007499,1.01e-15,22;UBERON:0006925,1.01e-15,22;UBERON:0009497,1.01e-15,22;UBERON:0000015,1.01e-15,22;UBERON:0002423,1.01e-15,22;UBERON:0006235,1.01e-15,22;UBERON:0008835,1.01e-15,22;UBERON:0003894,1.01e-15,22;UBERON:0004161,1.01e-15,22;UBERON:0008836,1.01e-15,22;UBERON:0004921,1.40e-15,114;UBERON:0001242,5.68e-14,13;UBERON:0001262,5.68e-14,13;UBERON:0004786,5.68e-14,13;UBERON:0002365,2.13e-13,25;UBERON:0002330,2.13e-13,25;UBERON:0003929,4.55e-10,55;UBERON:0004923,1.97e-09,24;UBERON:0002108,9.46e-09,4;UBERON:0000490,1.45e-07,66;UBERON:0003350,2.63e-07,9;UBERON:0004808,2.63e-07,9;UBERON:0001277,2.63e-07,9;UBERON:0000331,3.10e-07,3;UBERON:0002116,3.10e-07,3;UBERON:0001204,3.10e-07,3;UBERON:0001168,3.10e-07,3;UBERON:0005911,4.99e-07,69;UBERON:0005256,7.89e-07,45 | |||
|phase1_expression=0,35.2465161715755,26.8449551239826,63.5174843744343,66.1182363529178,2.68606835059024,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.35965144849671,13.0763290208287,39.6220055239364,33.1686737042488,21.1161808032171,115.344215610019,58.9750503638238,34.8116901728828,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,58.4775346988665,31.3027851149934,22.7421746106684,9.40856462904405,14.4657752735704,0,0,0,0,0,0,0,0,0,0,32.9991412388083,0,0.148442139064825,0,0,0,0,0.23517741427141,1.38233250462643,0,0,0,0,0,0,7.45567044872489,0,0,28.8666472385708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.1799367582943,22.7427487330648,0,0,0,0,0,0.190225626112559,27.9972146311262,5.27036655116835,0.754005626400808,1.1937388322469,1.36474860983384,17.0775687644302,29.1786367330837,45.005927755487,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,141.704355747657,0,0,0,0,0,0,0.575392274901621,16.6999283578286,57.108773943121,102.075426634422,91.5466731264518,126.063219938282,240.45509180565,86.6489507310836,44.8672474867931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809186078308924,7.76942483818158,0,4.53652406521275,0,0,0,0,0,0,0,0,1.69265700297135,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,1.50409737833809,0,0.661774257358546,1.15933917810211 | |phase1_expression=0,35.2465161715755,26.8449551239826,63.5174843744343,66.1182363529178,2.68606835059024,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.35965144849671,13.0763290208287,39.6220055239364,33.1686737042488,21.1161808032171,115.344215610019,58.9750503638238,34.8116901728828,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,58.4775346988665,31.3027851149934,22.7421746106684,9.40856462904405,14.4657752735704,0,0,0,0,0,0,0,0,0,0,32.9991412388083,0,0.148442139064825,0,0,0,0,0.23517741427141,1.38233250462643,0,0,0,0,0,0,7.45567044872489,0,0,28.8666472385708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.1799367582943,22.7427487330648,0,0,0,0,0,0.190225626112559,27.9972146311262,5.27036655116835,0.754005626400808,1.1937388322469,1.36474860983384,17.0775687644302,29.1786367330837,45.005927755487,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,141.704355747657,0,0,0,0,0,0,0.575392274901621,16.6999283578286,57.108773943121,102.075426634422,91.5466731264518,126.063219938282,240.45509180565,86.6489507310836,44.8672474867931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809186078308924,7.76942483818158,0,4.53652406521275,0,0,0,0,0,0,0,0,1.69265700297135,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,1.50409737833809,0,0.661774257358546,1.15933917810211 | ||
|short_description=p1@Rdh9 | |short_description=p1@Rdh9 | ||
}} | }} |
Latest revision as of 18:13, 25 September 2015
Short description: | p1@Rdh9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rdh9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2527 |
Association with transcript: | 0bp_to_ENSMUST00000052652, ENSMUST00000128133, ENSMUST00000136223, NM_153133, uc007hkp.1_5end |
EntrezGene: | Rdh9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.33e-11 | 6 |
gut absorptive cell | 2.33e-11 | 6 |
enterocyte | 2.33e-11 | 6 |
epithelial cell | 1.79e-10 | 25 |
columnar/cuboidal epithelial cell | 1.27e-09 | 7 |
endodermal cell | 6.82e-08 | 20 |
intestinal epithelial cell | 2.63e-07 | 9 |
epithelial cell of alimentary canal | 2.63e-07 | 9 |