Personal tools

FFCP PHASE1:Mm9::chr13:78338274..78338297,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=670
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr13:78338274..78338297,+
|description=CAGE_peak_at_chr13:78338274..78338297,+
|description=CAGE_peak_at_chr13:78338274..78338297,+
|id=chr13:78338274..78338297,+
|id=chr13:78338274..78338297,+
|ontology_enrichment_celltype=CL:0000117!2.45e-16!23;CL:0000337!2.45e-16!23;CL:0000221!4.66e-16!44;CL:0000133!4.66e-16!44;CL:0002319!2.40e-15!43;CL:0000540!2.08e-14!33;CL:0000047!2.08e-14!33;CL:0000031!2.08e-14!33;CL:0000404!2.08e-14!33;CL:0000055!2.27e-12!50;CL:0000393!1.22e-11!39;CL:0000211!1.22e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.22e-30,23;CL:0000337,7.22e-30,23;CL:0000540,3.45e-22,33;CL:0000047,3.45e-22,33;CL:0000031,3.45e-22,33;CL:0000404,3.45e-22,33;CL:0000221,4.71e-22,44;CL:0000133,4.71e-22,44;CL:0002319,2.37e-20,43;CL:0000393,3.90e-18,39;CL:0000211,3.90e-18,39;CL:0002609,3.73e-12,6;CL:0002321,4.39e-12,70;CL:0002608,2.14e-09,3;CL:0000120,8.81e-09,3;CL:0002613,1.26e-08,3;CL:0002610,6.07e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.50e-29!102;UBERON:0000924!4.50e-29!102;UBERON:0006601!4.50e-29!102;UBERON:0000073!1.28e-27!75;UBERON:0001016!1.28e-27!75;UBERON:0001017!2.71e-27!73;UBERON:0005743!2.71e-27!73;UBERON:0000033!2.79e-26!63;UBERON:0002346!7.47e-23!71;UBERON:0003075!7.47e-23!71;UBERON:0007284!7.47e-23!71;UBERON:0000955!1.91e-22!50;UBERON:0006238!1.91e-22!50;UBERON:0001049!4.57e-22!52;UBERON:0005068!4.57e-22!52;UBERON:0006241!4.57e-22!52;UBERON:0007135!4.57e-22!52;UBERON:0002616!8.81e-22!49;UBERON:0003056!1.51e-21!49;UBERON:0002020!3.99e-21!34;UBERON:0002791!7.11e-19!29;UBERON:0003528!7.11e-19!29;UBERON:0001893!7.11e-19!29;UBERON:0003080!7.93e-19!40;UBERON:0002780!3.27e-18!39;UBERON:0001890!3.27e-18!39;UBERON:0006240!3.27e-18!39;UBERON:0000956!3.46e-15!21;UBERON:0001869!3.46e-15!21;UBERON:0000203!3.46e-15!21;UBERON:0007811!4.74e-13!86;UBERON:0002619!1.20e-12!17;UBERON:0000153!3.84e-11!94;UBERON:0002021!4.56e-08!10;UBERON:0000411!4.56e-08!10;UBERON:0001950!4.56e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.46e-32,29;UBERON:0002791,2.46e-32,29;UBERON:0001893,2.46e-32,29;UBERON:0002020,1.01e-29,34;UBERON:0001017,1.12e-24,73;UBERON:0001016,7.42e-24,75;UBERON:0002780,7.33e-23,39;UBERON:0001890,7.33e-23,39;UBERON:0006240,7.33e-23,39;UBERON:0000073,8.58e-23,54;UBERON:0000956,1.76e-22,21;UBERON:0001869,1.76e-22,21;UBERON:0000203,1.76e-22,21;UBERON:0003080,3.57e-22,40;UBERON:0004121,1.10e-20,95;UBERON:0000924,1.10e-20,95;UBERON:0006601,1.10e-20,95;UBERON:0002619,2.41e-20,17;UBERON:0003056,3.24e-19,49;UBERON:0002616,1.11e-18,46;UBERON:0000955,3.47e-18,47;UBERON:0006238,3.47e-18,47;UBERON:0001049,9.05e-18,52;UBERON:0005068,9.05e-18,52;UBERON:0006241,9.05e-18,52;UBERON:0007135,9.05e-18,52;UBERON:0010371,1.45e-15,73;UBERON:0002346,4.44e-15,64;UBERON:0003075,4.44e-15,64;UBERON:0007284,4.44e-15,64;UBERON:0002021,4.75e-12,10;UBERON:0000411,4.75e-12,10;UBERON:0001950,4.75e-12,10;UBERON:0010314,3.01e-11,92;UBERON:0002420,8.93e-11,8;UBERON:0007245,8.93e-11,8;UBERON:0010009,8.93e-11,8;UBERON:0010011,8.93e-11,8;UBERON:0000454,8.93e-11,8;UBERON:0001954,1.09e-09,7;UBERON:0003022,1.09e-09,7;UBERON:0002421,1.09e-09,7;UBERON:0000349,1.09e-09,7;UBERON:0002600,1.09e-09,7;UBERON:0000369,2.17e-08,5;UBERON:0002435,2.17e-08,5;UBERON:0000204,2.17e-08,5;UBERON:0010082,2.17e-08,5;UBERON:0004684,6.07e-08,3;UBERON:0002275,6.07e-08,3;UBERON:0011216,8.21e-07,194
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0.218025156380447,1.09843091367236,0.58328969722285,0.139986421625363,2.87505128729943,0,0,0,0,0,0,2.63011399117477,2.11596391708813,1.26766280701236,0,0,0.449949858640699,0,0,0,0.384218305321555,2.48855069540346,3.91517221161903,0.420649922702764,0.285650984403804,1.10434270475807,1.95985278743926,2.68367318851062,4.5960939330501,2.20231761998777,1.0214987046815,1.0752457327937,1.58263545276233,1.82975287204819,2.08365348222704,1.11673199600552,0.56276261003168,1.22238598221448,0.589257170947335,0.427115042397309,0.931997229126503,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,0.898743836428936,0,1.00523481690292,0.869121600961382,2.30143911597297,0.62336413367868,0.973447578406546,0.203678727700633,0,0,0,1.43132487258974,0.229902104433473,0.540186389416048,0.30140963567143,0.612328492361951,0.896796041993948,0.562210347358373,0.517406741478031,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,1.85228302282712,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.814605311381257,0.581857461502877,0.0701358198903186,0,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0.586058432961016,0,0,0,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.328281799490123,0,0.18542530201051,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,1.10717597753397,0,0.432021363287205,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.03111909406213,2.74033007908257,0.755393897389701,2.02506750069542,0.900642406448441,1.81256963593682,0.51776031175182,0.93408612825759,1.59609949360412,1.53660245178721,0.243106717068294,0.628839487883947,0.551530525350042,0.44449345560323,0.412070114477788,0,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.320125762024346,0.114870937911227,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.887379030796687,0.476872379894642,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0,0,0,0
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0.218025156380447,1.09843091367236,0.58328969722285,0.139986421625363,2.87505128729943,0,0,0,0,0,0,2.63011399117477,2.11596391708813,1.26766280701236,0,0,0.449949858640699,0,0,0,0.384218305321555,2.48855069540346,3.91517221161903,0.420649922702764,0.285650984403804,1.10434270475807,1.95985278743926,2.68367318851062,4.5960939330501,2.20231761998777,1.0214987046815,1.0752457327937,1.58263545276233,1.82975287204819,2.08365348222704,1.11673199600552,0.56276261003168,1.22238598221448,0.589257170947335,0.427115042397309,0.931997229126503,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,0.898743836428936,0,1.00523481690292,0.869121600961382,2.30143911597297,0.62336413367868,0.973447578406546,0.203678727700633,0,0,0,1.43132487258974,0.229902104433473,0.540186389416048,0.30140963567143,0.612328492361951,0.896796041993948,0.562210347358373,0.517406741478031,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,1.85228302282712,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.814605311381257,0.581857461502877,0.0701358198903186,0,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0.586058432961016,0,0,0,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.328281799490123,0,0.18542530201051,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,1.10717597753397,0,0.432021363287205,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.03111909406213,2.74033007908257,0.755393897389701,2.02506750069542,0.900642406448441,1.81256963593682,0.51776031175182,0.93408612825759,1.59609949360412,1.53660245178721,0.243106717068294,0.628839487883947,0.551530525350042,0.44449345560323,0.412070114477788,0,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.320125762024346,0.114870937911227,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.887379030796687,0.476872379894642,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0,0,0,0
|short_description=p@chr13:78338274..78338297,+
|short_description=p@chr13:78338274..78338297,+
}}
}}

Latest revision as of 08:32, 6 August 2015

Short description:p@chr13:78338274..78338297, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr13:78338274..78338297, +
Coexpression cluster:MCL_coexpression_mm9:670
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr13:78338274..78338297+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain grey matter2.46e-3229
regional part of telencephalon2.46e-3229
telencephalon2.46e-3229
gray matter1.01e-2934
central nervous system1.12e-2473
nervous system7.42e-2475
regional part of forebrain7.33e-2339
forebrain7.33e-2339
future forebrain7.33e-2339
regional part of nervous system8.58e-2354
cerebral cortex1.76e-2221
cerebral hemisphere1.76e-2221
pallium1.76e-2221
anterior neural tube3.57e-2240
ectoderm-derived structure1.10e-2095
ectoderm1.10e-2095
presumptive ectoderm1.10e-2095
regional part of cerebral cortex2.41e-2017
pre-chordal neural plate3.24e-1949
regional part of brain1.11e-1846
brain3.47e-1847
future brain3.47e-1847
neural tube9.05e-1852
neural rod9.05e-1852
future spinal cord9.05e-1852
neural keel9.05e-1852
ecto-epithelium1.45e-1573
neurectoderm4.44e-1564
neural plate4.44e-1564
presumptive neural plate4.44e-1564
occipital lobe4.75e-1210
visual cortex4.75e-1210
neocortex4.75e-1210
structure with developmental contribution from neural crest3.01e-1192
basal ganglion8.93e-118
nuclear complex of neuraxis8.93e-118
aggregate regional part of brain8.93e-118
collection of basal ganglia8.93e-118
cerebral subcortex8.93e-118
Ammon's horn1.09e-097
lobe parts of cerebral cortex1.09e-097
hippocampal formation1.09e-097
limbic system1.09e-097
limbic lobe1.09e-097
corpus striatum2.17e-085
striatum2.17e-085
ventral part of telencephalon2.17e-085
future corpus striatum2.17e-085
raphe nuclei6.07e-083
reticular formation6.07e-083
organ system subdivision8.21e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:78338274..78338297,%2B&oldid=4000285"