FFCP PHASE1:Hg19::chr10:124050535..124050566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118663 | |EntrezGene=118663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26340 | |HGNC=26340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000507495_5end | |association_with_transcript=-29bp_to_ENST00000507495_5end | ||
|cluster_id=chr10:124050535..124050566,+ | |||
|coexpression_cluster_id=C2042 | |||
|description=CAGE_peak_3_at_BTBD16_5end | |description=CAGE_peak_3_at_BTBD16_5end | ||
|id=chr10:124050535..124050566,+ | |id=chr10:124050535..124050566,+ | ||
|ontology_enrichment_celltype=CL:0000244!6.36e-35!4;CL:0000731!6.36e-35!4;CL:0000312!1.92e-15!5;CL:0000240!5.75e-13!6;CL:0000311!5.75e-13!6;CL:0000079!5.75e-13!6;CL:0000237!5.75e-13!6;CL:0000036!5.75e-13!6;CL:0000357!5.75e-13!6;CL:0000114!5.75e-13!6;CL:0002178!2.40e-12!3;CL:0000362!7.37e-10!8 | |ontology_enrichment_celltype=CL:0000244!6.36e-35!4;CL:0000731!6.36e-35!4;CL:0000312!1.92e-15!5;CL:0000240!5.75e-13!6;CL:0000311!5.75e-13!6;CL:0000079!5.75e-13!6;CL:0000237!5.75e-13!6;CL:0000036!5.75e-13!6;CL:0000357!5.75e-13!6;CL:0000114!5.75e-13!6;CL:0002178!2.40e-12!3;CL:0000362!7.37e-10!8 | ||
|ontology_enrichment_celltype_v019=CL:0000244;4.09e-54;4!CL:0000731;4.09e-54;4!CL:0002178;1.24e-18;3!CL:0000312;2.54e-11;5!CL:0000240;1.37e-09;6!CL:0000311;1.37e-09;6!CL:0000079;1.37e-09;6!CL:0000237;1.37e-09;6!CL:1000415;3.56e-08;2!CL:0001014;8.60e-08;2!CL:0001016;8.60e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.09e-54,4;CL:0000731,4.09e-54,4;CL:0002178,1.14e-18,3;CL:0000312,2.68e-11,5;CL:0000240,1.44e-09,6;CL:0000311,1.44e-09,6;CL:0000079,1.44e-09,6;CL:0000237,1.44e-09,6;CL:0000036,1.44e-09,6;CL:0000357,1.44e-09,6;CL:0000114,1.44e-09,6;CL:1000415,3.56e-08,2;CL:0001014,8.04e-08,2;CL:0001016,8.04e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.61e-14;1!CL:0000357;1.37e-09;6!CL:0000114;1.37e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;5.37e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!5.25e-28!5;UBERON:0005910!2.18e-23!6;UBERON:0004913!2.26e-09!1;UBERON:0003703!2.26e-09!1;UBERON:0001174!2.26e-09!1;UBERON:0004914!2.26e-09!1;UBERON:0006554!1.09e-08!44;UBERON:0001008!1.77e-08!45;UBERON:0004119!3.14e-07!169;UBERON:0000925!3.14e-07!169;UBERON:0006595!3.14e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.12e-43;5!UBERON:0005910;2.99e-36;6!UBERON:0000486;2.50e-18;12!UBERON:0000945;1.42e-11;5!UBERON:0010039;1.42e-11;5!UBERON:0006554;3.36e-11;30!UBERON:0001008;3.36e-11;30!UBERON:0001255;6.58e-08;2!UBERON:0001556;6.58e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.12e-43,5;UBERON:0005910,2.99e-36,6;UBERON:0006554,2.23e-13,47;UBERON:0001008,4.34e-13,48;UBERON:0001255,7.03e-08,2;UBERON:0001556,7.03e-08,2;UBERON:0000945,1.40e-07,8;UBERON:0010039,1.40e-07,8;UBERON:0004119,3.80e-07,160;UBERON:0000925,3.80e-07,160;UBERON:0006595,3.80e-07,160 | |||
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|short_description=p3@BTBD16 | |short_description=p3@BTBD16 | ||
}} | }} |
Latest revision as of 20:12, 16 September 2015
Short description: | p3@BTBD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BTBD16_5end |
Coexpression cluster: | C2042_Urothelial_gall_adenocarcinoma_choriocarcinoma_signet_gastric_bladder |
Association with transcript: | -29bp_to_ENST00000507495_5end |
EntrezGene: | BTBD16 |
HGNC: | 26340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.09e-54 | 4 |
urothelial cell | 4.09e-54 | 4 |
epithelial cell of stomach | 1.14e-18 | 3 |
keratinocyte | 2.68e-11 | 5 |
stratified squamous epithelial cell | 1.44e-09 | 6 |
keratin accumulating cell | 1.44e-09 | 6 |
stratified epithelial cell | 1.44e-09 | 6 |
keratinizing barrier epithelial cell | 1.44e-09 | 6 |
epithelial fate stem cell | 1.44e-09 | 6 |
stratified epithelial stem cell | 1.44e-09 | 6 |
surface ectodermal cell | 1.44e-09 | 6 |
epithelial cell of gall bladder | 3.56e-08 | 2 |
CD1a-positive Langerhans cell | 8.04e-08 | 2 |
immature CD1a-positive Langerhans cell | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.12e-43 | 5 |
transitional epithelium | 2.99e-36 | 6 |
urinary system structure | 2.23e-13 | 47 |
renal system | 4.34e-13 | 48 |
urinary bladder | 7.03e-08 | 2 |
lower urinary tract | 7.03e-08 | 2 |
stomach | 1.40e-07 | 8 |
food storage organ | 1.40e-07 | 8 |
endoderm-derived structure | 3.80e-07 | 160 |
endoderm | 3.80e-07 | 160 |
presumptive endoderm | 3.80e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.37e-08 | 2 |