FFCP PHASE1:Hg19::chr10:62029985..62029992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:62029985..62029992,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_at_chr10:62029985..62029992,- | |description=CAGE_peak_at_chr10:62029985..62029992,- | ||
|id=chr10:62029985..62029992,- | |id=chr10:62029985..62029992,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;3.27e-23;3!CL:0000737;8.69e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.27e-23,3;CL:0000513,3.27e-23,3;CL:0000737,8.69e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.66e-66;1!CL:0000513;3.27e-23;3!UBERON:0003056;4.09e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-13!115;UBERON:0000941!4.46e-10!1;UBERON:0004904!4.46e-10!1;UBERON:0002464!4.46e-10!1;UBERON:0001021!4.46e-10!1;UBERON:0001785!4.46e-10!1;UBERON:0000998!5.31e-10!1;UBERON:0006868!5.31e-10!1;UBERON:0001736!5.79e-10!1;UBERON:0006298!5.79e-10!1;UBERON:0002171!6.31e-10!1;UBERON:0006518!6.31e-10!1;UBERON:0008949!6.31e-10!1;UBERON:0000101!6.31e-10!1;UBERON:0002167!6.31e-10!1;UBERON:0002146!9.70e-10!1;UBERON:0005623!9.70e-10!1;UBERON:0003112!1.36e-09!1;UBERON:0000032!1.36e-09!1;UBERON:0005253!1.36e-09!1;UBERON:0003128!1.36e-09!1;UBERON:0002241!1.36e-09!1;UBERON:0001703!1.36e-09!1;UBERON:0004761!1.36e-09!1;UBERON:0009617!1.36e-09!1;UBERON:0002372!2.46e-09!1;UBERON:0001961!2.46e-09!1;UBERON:0001744!2.46e-09!1;UBERON:0001735!2.46e-09!1;UBERON:0002022!2.67e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.66e-66;1!UBERON:0001785;4.66e-66;1!UBERON:0002464;4.66e-66;1!UBERON:0004904;4.66e-66;1!UBERON:0001021;4.66e-66;1!UBERON:0003714;7.05e-34;2!UBERON:0005162;7.05e-34;2!UBERON:0000122;7.05e-34;2!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0000010;1.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.66e-66,1;UBERON:0001785,4.66e-66,1;UBERON:0002464,4.66e-66,1;UBERON:0004904,4.66e-66,1;UBERON:0001021,4.66e-66,1;UBERON:0003902,4.66e-66,1;UBERON:0005425,4.66e-66,1;UBERON:0003714,7.05e-34,2;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001781,1.03e-17,4;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0000010,1.21e-08,8 | |||
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|short_description=p@chr10:62029985..62029992,- | |short_description=p@chr10:62029985..62029992,- | ||
}} | }} |
Latest revision as of 14:27, 23 July 2015
Short description: | p@chr10:62029985..62029992, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:62029985..62029992, - |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.27e-23 | 3 |
cardiac muscle myoblast | 3.27e-23 | 3 |
striated muscle cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
layer of retina | 1.03e-17 | 4 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |