FFCP PHASE1:Hg19::chr10:7420856..7420869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:7420856..7420869,- | |||
|description=CAGE_peak_at_chr10:7420856..7420869,- | |description=CAGE_peak_at_chr10:7420856..7420869,- | ||
|id=chr10:7420856..7420869,- | |id=chr10:7420856..7420869,- | ||
|ontology_enrichment_celltype=CL:0000037!1.71e-16!172;CL:0000566!1.71e-16!172;CL:0002032!2.60e-15!165;CL:0000837!2.60e-15!165;CL:0000988!5.54e-15!182;CL:0002087!1.41e-12!119;CL:0000738!4.00e-11!140;CL:0002031!8.52e-11!124;CL:0000763!5.71e-09!112;CL:0000049!5.71e-09!112;CL:0000542!6.41e-07!53;CL:0000051!6.41e-07!53 | |ontology_enrichment_celltype=CL:0000037!1.71e-16!172;CL:0000566!1.71e-16!172;CL:0002032!2.60e-15!165;CL:0000837!2.60e-15!165;CL:0000988!5.54e-15!182;CL:0002087!1.41e-12!119;CL:0000738!4.00e-11!140;CL:0002031!8.52e-11!124;CL:0000763!5.71e-09!112;CL:0000049!5.71e-09!112;CL:0000542!6.41e-07!53;CL:0000051!6.41e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.26e-08,168;CL:0002032,2.35e-07,161;CL:0000837,2.35e-07,161;CL:0000988,2.39e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.24e-08;1!UBERON:0008425;2.27e-07;1 | |||
|ontology_enrichment_disease=DOID:2531!3.42e-13!51;DOID:0060083!3.42e-13!51;DOID:1240!7.99e-11!39;DOID:8692!1.48e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.05e-11;31!DOID:1240;1.35e-09;39!DOID:2531;2.43e-08;51!DOID:0060083;2.43e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.38e-12,51;DOID:0060083,1.38e-12,51;DOID:8692,1.33e-11,31;DOID:1240,2.44e-11,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.22e-20!115;UBERON:0001049!7.09e-19!57;UBERON:0005068!7.09e-19!57;UBERON:0006241!7.09e-19!57;UBERON:0007135!7.09e-19!57;UBERON:0002616!2.13e-15!59;UBERON:0000955!2.94e-15!69;UBERON:0006238!2.94e-15!69;UBERON:0002780!1.01e-14!41;UBERON:0001890!1.01e-14!41;UBERON:0006240!1.01e-14!41;UBERON:0001017!2.92e-14!82;UBERON:0003080!3.80e-14!42;UBERON:0005743!6.32e-14!86;UBERON:0003075!1.15e-13!86;UBERON:0007284!1.15e-13!86;UBERON:0002346!4.33e-13!90;UBERON:0000073!7.32e-12!94;UBERON:0001016!7.32e-12!94;UBERON:0002020!1.66e-10!34;UBERON:0003528!1.66e-10!34;UBERON:0001893!1.90e-10!34;UBERON:0002791!5.33e-10!33;UBERON:0003056!7.55e-10!61;UBERON:0001869!7.20e-09!32;UBERON:0002619!1.40e-07!22;UBERON:0001950!1.68e-07!20;UBERON:0002390!3.84e-07!102;UBERON:0003061!3.84e-07!102;UBERON:0000956!5.47e-07!25;UBERON:0000203!5.47e-07!25;UBERON:0002298!8.36e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.50e-14;4!UBERON:0001897;4.57e-13;2!UBERON:0010225;4.57e-13;2!UBERON:0001894;2.57e-08;7!UBERON:0002336;2.27e-07;1!UBERON:0002038;2.27e-07;1!UBERON:0011215;2.27e-07;1!UBERON:0001018;2.27e-07;1!UBERON:0009661;2.27e-07;1!UBERON:0002950;2.27e-07;1!UBERON:0002473;2.27e-07;1!UBERON:0005340;2.27e-07;1!UBERON:0003544;2.27e-07;1!UBERON:0005970;2.27e-07;1!UBERON:0002316;2.27e-07;1!UBERON:0001020;2.27e-07;1!UBERON:0001891;2.27e-07;1!UBERON:0002437;2.27e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,3.95e-14,4;UBERON:0001897,2.99e-13,2;UBERON:0010225,2.99e-13,2;UBERON:0001894,2.75e-08,7;UBERON:0006222,2.75e-08,7;UBERON:0002336,2.21e-07,1;UBERON:0011215,2.21e-07,1;UBERON:0001018,2.21e-07,1;UBERON:0002473,2.21e-07,1;UBERON:0005340,2.21e-07,1;UBERON:0003544,2.21e-07,1;UBERON:0005970,2.21e-07,1;UBERON:0002316,2.21e-07,1;UBERON:0001020,2.21e-07,1;UBERON:0002437,2.21e-07,1;UBERON:0002038,3.40e-07,1;UBERON:0009661,3.40e-07,1;UBERON:0002950,3.40e-07,1;UBERON:0001891,3.40e-07,1;UBERON:0009616,3.40e-07,1;UBERON:0010286,3.40e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.61130724598361,0.328402357799783,0.629686250509434,0.393364276848904,0,0,0,0,0,0.46480320348181,0.568676929949686,0,0.553995408531877,1.40381113229099,0.434021741431704,0.223915474239924,0,0.515151135268373,0,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0,0,0,0,0,0,0,1.39624560335142,0.426224750532694,0.580418477257168,0,0,2.76373531782418,1.5644487552606,0.868755378820466,0,0,0,0,0.212604299965044,0,0.336985893439485,0.300353785683013,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,1.17903228824749,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0.657751618414705,0.276350017785848,0.289803085735052,0.741432815810302,0.267540828089713,2.09071047609954,0.226618685395132,0,0,0.506039384039006,0,0,0.950452044448374,0,0,1.24930726552346,0.236777252044017,0,0.403213486449465,0.267440195783507,1.01377082717959,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,1.02674429023799,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.185803175125719,0.28853842595289,1.35169502361987,0.318852545457645,0.199579371432817,0,1.48171507906718,1.62310970137278,0.280797178113459,0.912938716132769,0.313359791546046,0,0.677167111206413,1.1241165257259,2.62339619348362,0,0.687010689511529,4.30137070031841,1.3420566473545,1.66849141711908,1.17232857241224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0,0,0.511572370226872,0.295930216910801,0,0,1.93866549219044,0.185536196323703,0,0,1.57427999993152,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0.774054819518572,0.591095237907095,0,0,0,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.627921025580099,0,0.225595660617181,0.19606253431774,0.335643173951685,0.37950746544837,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0.522109747527277,1.34802265961354,0,0,0.91227394607833,0,0,0,0,0,0.884612114798832,0,0.311064574191741,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.219267951258557,0,0.0969890164884194,0,0,0,0,0.443175571691151,0.391102765469606,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0.335917362433631,0,0,0,0,0,0,0.508039992394707,0,0.408610218334727,0,0,0,0,0,0.728994679896296,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.776503360757966,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.414775308455192,0,0,0,0,0,0,0,0.640150378164845,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0.385375350578757,1.41696576325585,0.478901577171454,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,2.34323429584154,0.620060389503552,0.317079050969534,0.546974809018219,0.548257766857182,0.496211178389294,0.175871244359621,0,1.07140367175657,0.672567444437648,0.606965604236632,0.91064876540519,0.0887023701626388,0,0,0.747667062745149,0.131545547125698,0.590969204419841,0,0.313972371402056,0,0,0,0.215927591218621,0,1.07214816264985,0.316027223465453,0.348724276104376,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.5647304101948,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0.891139200981258,0,0,0.281951753939561,0.644578879735772,2.49852889812322,0,0,0,0,0,1.14671666521161,0.473314686579554,0.271965960763659,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0.267964130156178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| ||
|short_description=p@chr10:7420856..7420869,- | |short_description=p@chr10:7420856..7420869,- | ||
}} | }} |
Latest revision as of 15:27, 23 July 2015
Short description: | p@chr10:7420856..7420869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:7420856..7420869, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.26e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.35e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.35e-07 | 161 |
hematopoietic cell | 2.39e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 3.95e-14 | 4 |
dorsal plus ventral thalamus | 2.99e-13 | 2 |
thalamic complex | 2.99e-13 | 2 |
diencephalon | 2.75e-08 | 7 |
future diencephalon | 2.75e-08 | 7 |
corpus callosum | 2.21e-07 | 1 |
central nervous system cell part cluster | 2.21e-07 | 1 |
axon tract | 2.21e-07 | 1 |
intercerebral commissure | 2.21e-07 | 1 |
dorsal telencephalic commissure | 2.21e-07 | 1 |
brain white matter | 2.21e-07 | 1 |
brain commissure | 2.21e-07 | 1 |
white matter | 2.21e-07 | 1 |
nervous system commissure | 2.21e-07 | 1 |
cerebral hemisphere white matter | 2.21e-07 | 1 |
substantia nigra | 3.40e-07 | 1 |
midbrain nucleus | 3.40e-07 | 1 |
regional part of midbrain | 3.40e-07 | 1 |
midbrain | 3.40e-07 | 1 |
presumptive midbrain | 3.40e-07 | 1 |
midbrain neural tube | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.38e-12 | 51 |
immune system cancer | 1.38e-12 | 51 |
myeloid leukemia | 1.33e-11 | 31 |
leukemia | 2.44e-11 | 39 |