FFCP PHASE1:Mm9::chr13:110422754..110422758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238871 | |EntrezGene=238871 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=45 | |||
|TSSclassifier=NA | |||
|UniProt=B2KF57 | |UniProt=B2KF57 | ||
|association_with_transcript=-217bp_to_ENSMUST00000135275_5end | |association_with_transcript=-217bp_to_ENSMUST00000135275_5end | ||
|cluster_id=chr13:110422754..110422758,+ | |||
|description=CAGE_peak_23_at_Pde4d_5end | |description=CAGE_peak_23_at_Pde4d_5end | ||
|id=chr13:110422754..110422758,+ | |id=chr13:110422754..110422758,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.03e-08,3;CL:0002202,2.03e-08,3;CL:0000069,2.03e-08,3;CL:0002632,2.03e-08,3;CL:0002368,2.03e-08,3;CL:0000307,2.03e-08,3;CL:0000377,2.03e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.52e-09!18;UBERON:0000948!3.52e-09!18;UBERON:0005498!3.52e-09!18;UBERON:0004140!3.52e-09!18;UBERON:0009881!3.52e-09!18;UBERON:0004141!3.52e-09!18;UBERON:0003084!3.52e-09!18;UBERON:0007005!3.52e-09!18;UBERON:0004139!3.52e-09!18;UBERON:0004291!3.52e-09!18;UBERON:0005178!4.94e-09!17;UBERON:0005181!4.94e-09!17;UBERON:0002224!4.94e-09!17;UBERON:0000915!4.94e-09!17;UBERON:0008947!4.94e-09!17;UBERON:0003258!4.94e-09!17;UBERON:0003914!3.58e-08!47;UBERON:0004535!3.25e-07!23;UBERON:0001009!3.25e-07!23;UBERON:0002048!7.39e-07!14;UBERON:0000117!7.39e-07!14;UBERON:0000171!7.39e-07!14;UBERON:0000170!7.39e-07!14;UBERON:0005597!7.39e-07!14;UBERON:0000118!7.39e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.71e-18,47;UBERON:0007100,3.75e-15,18;UBERON:0000948,3.75e-15,18;UBERON:0005498,3.75e-15,18;UBERON:0004140,3.75e-15,18;UBERON:0009881,3.75e-15,18;UBERON:0004141,3.75e-15,18;UBERON:0003084,3.75e-15,18;UBERON:0007005,3.75e-15,18;UBERON:0004139,3.75e-15,18;UBERON:0004291,3.75e-15,18;UBERON:0004535,7.21e-14,23;UBERON:0001009,7.21e-14,23;UBERON:0004872,5.82e-09,33;UBERON:0003103,7.49e-09,43;UBERON:0003126,2.03e-08,3;UBERON:0001005,2.03e-08,3;UBERON:0007196,2.03e-08,3;UBERON:0001558,2.03e-08,3;UBERON:0001048,3.68e-07,134;UBERON:0002107,6.06e-07,22;UBERON:0007499,6.06e-07,22;UBERON:0006925,6.06e-07,22;UBERON:0009497,6.06e-07,22;UBERON:0000015,6.06e-07,22;UBERON:0002423,6.06e-07,22;UBERON:0006235,6.06e-07,22;UBERON:0008835,6.06e-07,22;UBERON:0003894,6.06e-07,22;UBERON:0004161,6.06e-07,22;UBERON:0008836,6.06e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0,0,0.376999773989026,1.48316980640624,2.16899035379867,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0.59710280045548,0.702213187313235,0.257347907114715,0.284163499395593,3.31401236056803,2.11073453982987,2.88099298337624,3.55117103377815,3.73852040320067,2.46827380619805,4.41814495025775,4.56064782379353,1.98501082024188,1.97471819896177,0.820837320395476,0.648550476366846,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.31399745568275,0,0,1.33476084572875,1.57247196090562,1.57403478669398,2.23146133527353,2.17059443777175,2.29163266603278,1.15078454980324,0.486405680325106,1.92192989231657,0,0.372140947668503,0.624075346229121,0,0,0,0.923765950833023,0.37898282354097,0.488894929326078,0.848725428875941,0.469380496577004,0.167506257441816,1.19021820443007,0.390267295715598,0.315270288212382,0,0.797273843287435,0.655453258862952,1.03610989119537,0.578596234326046,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0.42366414172764,0,0.49465875882444,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.316335993581135,0.813277868507395,0.432021363287205,0.627264888043406,0,0.134864346384821,0.247960367176008,0,0,0,0,1.49516546043979,0.827292452285488,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0.972426868273176,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.640251524048693,0.34461281373368,0,0.463537303779422,0.77163688185482,0,0.588795680537589,1.37147700954166,0.532427418478012,1.1921809497366,0.581385666529314,0.564656282491984,1.18460451048347,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,0.355905054372522,0.29551344712669,1.22769312950907,0.619747364743864,0.578719832943424,0,0.233931608445408,0.859484216193193,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0,0,0.376999773989026,1.48316980640624,2.16899035379867,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0.59710280045548,0.702213187313235,0.257347907114715,0.284163499395593,3.31401236056803,2.11073453982987,2.88099298337624,3.55117103377815,3.73852040320067,2.46827380619805,4.41814495025775,4.56064782379353,1.98501082024188,1.97471819896177,0.820837320395476,0.648550476366846,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.31399745568275,0,0,1.33476084572875,1.57247196090562,1.57403478669398,2.23146133527353,2.17059443777175,2.29163266603278,1.15078454980324,0.486405680325106,1.92192989231657,0,0.372140947668503,0.624075346229121,0,0,0,0.923765950833023,0.37898282354097,0.488894929326078,0.848725428875941,0.469380496577004,0.167506257441816,1.19021820443007,0.390267295715598,0.315270288212382,0,0.797273843287435,0.655453258862952,1.03610989119537,0.578596234326046,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0.42366414172764,0,0.49465875882444,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.316335993581135,0.813277868507395,0.432021363287205,0.627264888043406,0,0.134864346384821,0.247960367176008,0,0,0,0,1.49516546043979,0.827292452285488,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0.972426868273176,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.640251524048693,0.34461281373368,0,0.463537303779422,0.77163688185482,0,0.588795680537589,1.37147700954166,0.532427418478012,1.1921809497366,0.581385666529314,0.564656282491984,1.18460451048347,1.09756783723664,0.526139422875686,0.814824683075171,1.12228454331548,0.355905054372522,0.29551344712669,1.22769312950907,0.619747364743864,0.578719832943424,0,0.233931608445408,0.859484216193193,0,0.441182838239031,0 | ||
|short_description=p23@Pde4d | |short_description=p23@Pde4d | ||
}} | }} |
Latest revision as of 02:22, 27 September 2015
Short description: | p23@Pde4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Pde4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | -217bp_to_ENSMUST00000135275_5end |
EntrezGene: | Pde4d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.03e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.03e-08 | 3 |
branched duct epithelial cell | 2.03e-08 | 3 |
epithelial cell of lower respiratory tract | 2.03e-08 | 3 |
respiratory epithelial cell | 2.03e-08 | 3 |
tracheal epithelial cell | 2.03e-08 | 3 |
tracheoblast | 2.03e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.71e-18 | 47 |
primary circulatory organ | 3.75e-15 | 18 |
heart | 3.75e-15 | 18 |
primitive heart tube | 3.75e-15 | 18 |
primary heart field | 3.75e-15 | 18 |
anterior lateral plate mesoderm | 3.75e-15 | 18 |
heart tube | 3.75e-15 | 18 |
heart primordium | 3.75e-15 | 18 |
cardiac mesoderm | 3.75e-15 | 18 |
cardiogenic plate | 3.75e-15 | 18 |
heart rudiment | 3.75e-15 | 18 |
cardiovascular system | 7.21e-14 | 23 |
circulatory system | 7.21e-14 | 23 |
splanchnic layer of lateral plate mesoderm | 5.82e-09 | 33 |
compound organ | 7.49e-09 | 43 |
trachea | 2.03e-08 | 3 |
respiratory airway | 2.03e-08 | 3 |
tracheobronchial tree | 2.03e-08 | 3 |
lower respiratory tract | 2.03e-08 | 3 |
primordium | 3.68e-07 | 134 |
liver | 6.06e-07 | 22 |
epithelial sac | 6.06e-07 | 22 |
digestive gland | 6.06e-07 | 22 |
epithelium of foregut-midgut junction | 6.06e-07 | 22 |
anatomical boundary | 6.06e-07 | 22 |
hepatobiliary system | 6.06e-07 | 22 |
foregut-midgut junction | 6.06e-07 | 22 |
hepatic diverticulum | 6.06e-07 | 22 |
liver primordium | 6.06e-07 | 22 |
septum transversum | 6.06e-07 | 22 |
liver bud | 6.06e-07 | 22 |