FFCP PHASE1:Mm9::chr14:99713495..99713504,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1985 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:99713495..99713504,+ | |||
|description=CAGE_peak_at_chr14:99713495..99713504,+ | |description=CAGE_peak_at_chr14:99713495..99713504,+ | ||
|id=chr14:99713495..99713504,+ | |id=chr14:99713495..99713504,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.30e-12,15;CL:0002563,2.55e-11,9;CL:0002251,2.55e-11,9;CL:0000066,7.37e-10,25;CL:0000223,4.73e-08,20;CL:0000239,1.16e-07,6;CL:0000677,1.16e-07,6;CL:0000584,1.16e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.11e-13!59;UBERON:0000344!1.99e-10!15;UBERON:0000160!3.54e-10!43;UBERON:0004923!2.75e-09!24;UBERON:0001242!4.27e-09!13;UBERON:0000060!4.27e-09!13;UBERON:0001262!4.27e-09!13;UBERON:0004786!4.27e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.10e-30,47;UBERON:0000160,1.57e-28,31;UBERON:0000344,2.36e-19,15;UBERON:0001242,1.11e-16,13;UBERON:0001262,1.11e-16,13;UBERON:0004786,1.11e-16,13;UBERON:0001007,7.22e-14,116;UBERON:0001555,7.22e-14,116;UBERON:0007026,7.22e-14,116;UBERON:0004119,2.03e-13,118;UBERON:0000925,2.03e-13,118;UBERON:0006595,2.03e-13,118;UBERON:0004921,2.63e-12,114;UBERON:0004923,5.82e-12,24;UBERON:0003350,2.55e-11,9;UBERON:0004808,2.55e-11,9;UBERON:0001277,2.55e-11,9;UBERON:0000485,7.04e-09,11;UBERON:0002108,3.25e-07,4 | |||
|phase1_expression=0,2.79180326111489,2.72999543633722,1.20985684522732,4.50806156951712,1.84667199103079,3.50418960893289,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,3.67982572424835,7.11168771308227,9.18771142584032,3.01533397311352,3.44753972297422,14.6318032981408,10.0812051903972,5.54326276638262,0,0,0,5.19932915552294,4.48833542467929,3.47087905646027,2.09265815368454,1.5626706890476,1.57057123192139,3.52938892818609,4.78131839470912,1.45653105909346,0.125896817975577,0.101376931219515,0,1.56478268869608,0.218025156380447,0,0.194429899074283,1.53985063787899,0,0,0,0,0.771778308107841,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0,0,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,8.87613268145978,5.57391704045217,7.58286667522175,1.7127581957859,0,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0,2.22475470960936,0,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,5.10914110417183,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0.324482526135515,0.101839363850316,0.124406970610093,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,1.94633074457919,1.0447564995665,1.02891068203972,0,0,0.257347907114715,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,2.31293148088659,3.43785736662608,0.639864751605702,1.16118335930219,0.644337306610467,0.605050573870028,0.22237804384487,1.71203063501303,6.64340686162316,3.29397909448022,4.77536896720512,4.97391180102877,3.31438948102504,6.29173586057955,7.5648317456143,5.77509692437665,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.678980343100753,0.704070744865506,0.335012514883631,0.714130922658041,1.56106918286239,0.315270288212382,0.44292937929755,0.159454768657487,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0,0,0,0,0.983609672260053,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,1.03371317267288,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.354680467284547,1.07021290561242,0.164549020602121,0.304464949114599,0.938686832254841,0.847328283455281,0,0.32977250588296,1.13025098687134,0.844380948994182,2.26807453605959,0.984845398470368,4.95517422270746,0,0.341741761595705,0,0.555583582109135,0,0.27338845544205,0.457556346413045,0,0.139951452323658,0,5.72802370809068,0.474503990371703,0.406638934253697,2.48412283890143,5.22720740036172,2.62035076495413,2.69728692769641,1.40510874733071,2.87931536182433,4.92536898508813,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0.887943813496259,1.79427713218951,0.671538465456314,1.15913756419314,1.12609485270709,0.36630324853453,1.71494703263253,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0.972426868273176,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.468207537349412,0.512201219238954,0.918967503289812,0,0.347652977834566,1.35036454324594,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.476872379894642,0.872078499793971,0.470546902076653,0.592302255241736,0.73171189149109,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0,2.79180326111489,2.72999543633722,1.20985684522732,4.50806156951712,1.84667199103079,3.50418960893289,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,3.67982572424835,7.11168771308227,9.18771142584032,3.01533397311352,3.44753972297422,14.6318032981408,10.0812051903972,5.54326276638262,0,0,0,5.19932915552294,4.48833542467929,3.47087905646027,2.09265815368454,1.5626706890476,1.57057123192139,3.52938892818609,4.78131839470912,1.45653105909346,0.125896817975577,0.101376931219515,0,1.56478268869608,0.218025156380447,0,0.194429899074283,1.53985063787899,0,0,0,0,0.771778308107841,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0,0,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,8.87613268145978,5.57391704045217,7.58286667522175,1.7127581957859,0,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0,2.22475470960936,0,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,5.10914110417183,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0,0.324482526135515,0.101839363850316,0.124406970610093,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,1.94633074457919,1.0447564995665,1.02891068203972,0,0,0.257347907114715,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,2.31293148088659,3.43785736662608,0.639864751605702,1.16118335930219,0.644337306610467,0.605050573870028,0.22237804384487,1.71203063501303,6.64340686162316,3.29397909448022,4.77536896720512,4.97391180102877,3.31438948102504,6.29173586057955,7.5648317456143,5.77509692437665,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.678980343100753,0.704070744865506,0.335012514883631,0.714130922658041,1.56106918286239,0.315270288212382,0.44292937929755,0.159454768657487,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0,0,0,0,0.983609672260053,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,1.03371317267288,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.354680467284547,1.07021290561242,0.164549020602121,0.304464949114599,0.938686832254841,0.847328283455281,0,0.32977250588296,1.13025098687134,0.844380948994182,2.26807453605959,0.984845398470368,4.95517422270746,0,0.341741761595705,0,0.555583582109135,0,0.27338845544205,0.457556346413045,0,0.139951452323658,0,5.72802370809068,0.474503990371703,0.406638934253697,2.48412283890143,5.22720740036172,2.62035076495413,2.69728692769641,1.40510874733071,2.87931536182433,4.92536898508813,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0.887943813496259,1.79427713218951,0.671538465456314,1.15913756419314,1.12609485270709,0.36630324853453,1.71494703263253,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0.972426868273176,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,0.468207537349412,0.512201219238954,0.918967503289812,0,0.347652977834566,1.35036454324594,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.476872379894642,0.872078499793971,0.470546902076653,0.592302255241736,0.73171189149109,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr14:99713495..99713504,+ | |short_description=p@chr14:99713495..99713504,+ | ||
}} | }} |
Latest revision as of 22:22, 4 August 2015
Short description: | p@chr14:99713495..99713504, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:99713495..99713504, + |
Coexpression cluster: | MCL_coexpression_mm9:1985 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.30e-12 | 15 |
intestinal epithelial cell | 2.55e-11 | 9 |
epithelial cell of alimentary canal | 2.55e-11 | 9 |
epithelial cell | 7.37e-10 | 25 |
endodermal cell | 4.73e-08 | 20 |
brush border epithelial cell | 1.16e-07 | 6 |
gut absorptive cell | 1.16e-07 | 6 |
enterocyte | 1.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.10e-30 | 47 |
intestine | 1.57e-28 | 31 |
mucosa | 2.36e-19 | 15 |
intestinal mucosa | 1.11e-16 | 13 |
wall of intestine | 1.11e-16 | 13 |
gastrointestinal system mucosa | 1.11e-16 | 13 |
digestive system | 7.22e-14 | 116 |
digestive tract | 7.22e-14 | 116 |
primitive gut | 7.22e-14 | 116 |
endoderm-derived structure | 2.03e-13 | 118 |
endoderm | 2.03e-13 | 118 |
presumptive endoderm | 2.03e-13 | 118 |
subdivision of digestive tract | 2.63e-12 | 114 |
organ component layer | 5.82e-12 | 24 |
epithelium of mucosa | 2.55e-11 | 9 |
gastrointestinal system epithelium | 2.55e-11 | 9 |
intestinal epithelium | 2.55e-11 | 9 |
simple columnar epithelium | 7.04e-09 | 11 |
small intestine | 3.25e-07 | 4 |