FFCP PHASE1:Hg19::chr12:109040682..109040690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109040682..109040690,- | |||
|description=CAGE_peak_at_chr12:109040682..109040690,- | |description=CAGE_peak_at_chr12:109040682..109040690,- | ||
|id=chr12:109040682..109040690,- | |id=chr12:109040682..109040690,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;1.38e-09;2!CL:0000359;8.15e-09;32!CL:0002539;1.24e-07;10!CL:0000346;8.38e-07;3!CL:1000428;8.38e-07;3!CL:0002567;8.38e-07;3!CL:0002592;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.02e-09,2;CL:0000359,1.36e-08,32;CL:0002539,1.29e-07,10;CL:0002567,6.50e-07,3;CL:0002592,7.28e-07,3;CL:0000346,7.70e-07,3;CL:1000428,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.38e-09;2!UBERON:0004237;1.24e-07;10!UBERON:0004695;1.24e-07;10!UBERON:0002111;1.24e-07;10!UBERON:0004178;1.24e-07;10!UBERON:0004573;4.08e-07;33!UBERON:0004571;4.08e-07;33!UBERON:0003498;8.38e-07;3!UBERON:0005985;8.38e-07;3!UBERON:0000412;8.38e-07;3!UBERON:0001621;8.38e-07;3!UBERON:0001992;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.02e-09,2;UBERON:0004573,2.43e-08,33;UBERON:0004571,2.43e-08,33;UBERON:0004237,1.29e-07,10;UBERON:0004695,1.29e-07,10;UBERON:0002111,1.29e-07,10;UBERON:0004178,1.29e-07,10;UBERON:0001621,7.28e-07,3;UBERON:0000412,7.70e-07,3;UBERON:0001992,7.70e-07,3 | |||
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| ||
|short_description=p@chr12:109040682..109040690,- | |short_description=p@chr12:109040682..109040690,- | ||
}} | }} |
Latest revision as of 04:39, 24 July 2015
Short description: | p@chr12:109040682..109040690, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109040682..109040690, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
vascular associated smooth muscle cell | 1.36e-08 | 32 |
aortic smooth muscle cell | 1.29e-07 | 10 |
light melanocyte | 6.50e-07 | 3 |
smooth muscle cell of the coronary artery | 7.28e-07 | 3 |
hair follicle dermal papilla cell | 7.70e-07 | 3 |
stem cell of epidermis | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.02e-09 | 2 |
systemic artery | 2.43e-08 | 33 |
systemic arterial system | 2.43e-08 | 33 |
blood vessel smooth muscle | 1.29e-07 | 10 |
arterial system smooth muscle | 1.29e-07 | 10 |
artery smooth muscle tissue | 1.29e-07 | 10 |
aorta smooth muscle tissue | 1.29e-07 | 10 |
coronary artery | 7.28e-07 | 3 |
dermal papilla | 7.70e-07 | 3 |
papillary layer of dermis | 7.70e-07 | 3 |