FFCP PHASE1:Hg19::chr12:113623252..113623300,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79039 | |EntrezGene=79039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20084 | |HGNC=20084 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDD1 | |UniProt=Q8TDD1 | ||
|association_with_transcript=0bp_to_ENST00000306014,ENST00000314045,NM_001111322,NM_024072,uc001tup.2,uc001tuq.3_5end | |association_with_transcript=0bp_to_ENST00000306014,ENST00000314045,NM_001111322,NM_024072,uc001tup.2,uc001tuq.3_5end | ||
|cluster_id=chr12:113623252..113623300,- | |||
|description=CAGE_peak_1_at_DDX54_5end | |description=CAGE_peak_1_at_DDX54_5end | ||
|id=chr12:113623252..113623300,- | |id=chr12:113623252..113623300,- | ||
|ontology_enrichment_celltype=CL:0000066!1.26e-24!254;CL:0000012!3.50e-15!682;CL:0000548!1.47e-14!679;CL:0000004!1.47e-14!679;CL:0000255!1.47e-14!679;CL:0000063!2.45e-10!578;CL:0002321!1.30e-08!248;CL:0000220!3.93e-08!246;CL:0000076!5.32e-08!62;CL:1000449!1.13e-07!16;CL:0000003!1.40e-07!722;CL:0000223!8.56e-07!59;CL:0002681!9.43e-07!13;CL:0002584!9.43e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.26e-24!254;CL:0000012!3.50e-15!682;CL:0000548!1.47e-14!679;CL:0000004!1.47e-14!679;CL:0000255!1.47e-14!679;CL:0000063!2.45e-10!578;CL:0002321!1.30e-08!248;CL:0000220!3.93e-08!246;CL:0000076!5.32e-08!62;CL:1000449!1.13e-07!16;CL:0000003!1.40e-07!722;CL:0000223!8.56e-07!59;CL:0002681!9.43e-07!13;CL:0002584!9.43e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.59e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-24,253;CL:0002321,5.67e-09,250;CL:0000076,6.76e-08,63;CL:1000449,1.60e-07,15;CL:0000223,6.91e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.13e-20!235;DOID:14566!4.06e-20!239;DOID:0050687!5.24e-13!143;DOID:2531!3.27e-11!51;DOID:0060083!3.27e-11!51;DOID:305!5.51e-11!106;DOID:0050686!9.05e-10!137;DOID:1240!1.20e-08!39;DOID:8692!5.20e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.21e-08;31!DOID:1240;1.59e-07;39!DOID:2531;4.23e-07;51!DOID:0060083;4.23e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.13e-20,235;DOID:14566,4.06e-20,239;DOID:0050687,5.24e-13,143;DOID:2531,3.27e-11,51;DOID:0060083,3.27e-11,51;DOID:305,5.51e-11,106;DOID:0050686,9.05e-10,137;DOID:1240,1.20e-08,39;DOID:8692,5.20e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0005177!3.86e-09!107;UBERON:0003104!1.16e-08!238;UBERON:0009142!1.16e-08!238;UBERON:0001041!2.24e-08!98;UBERON:0000077!7.46e-08!130;UBERON:0004211!1.13e-07!16;UBERON:0001285!1.13e-07!16;UBERON:0007684!1.13e-07!16;UBERON:0003220!1.13e-07!16;UBERON:0004208!1.13e-07!16;UBERON:0000466!1.28e-07!126;UBERON:0006555!2.08e-07!17;UBERON:0005103!2.08e-07!17;UBERON:0000083!2.08e-07!17;UBERON:0009201!2.08e-07!17;UBERON:0004819!2.08e-07!17;UBERON:0006553!2.08e-07!17;UBERON:0003074!2.08e-07!17;UBERON:0003060!2.08e-07!17;UBERON:0002113!5.86e-07!27;UBERON:0003918!5.86e-07!27;UBERON:0005095!5.86e-07!27;UBERON:0007687!5.86e-07!27;UBERON:0000464!8.11e-07!104;UBERON:0001225!9.43e-07!13;UBERON:0008987!9.43e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.49e-07;24!UBERON:0011143;1.49e-07;24!UBERON:0006555;1.59e-07;15!UBERON:0004819;1.59e-07;15!UBERON:0001285;1.59e-07;15!UBERON:0007684;1.59e-07;15!UBERON:0000072;8.19e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.12e-11,101;UBERON:0004211,1.60e-07,15;UBERON:0009773,1.60e-07,15;UBERON:0001231,1.60e-07,15;UBERON:0001285,1.60e-07,15;UBERON:0007684,1.60e-07,15;UBERON:0004208,1.60e-07,15;UBERON:0006555,3.04e-07,16;UBERON:0004819,3.04e-07,16;UBERON:0002100,6.16e-07,199;UBERON:0002113,9.14e-07,26;UBERON:0003918,9.14e-07,26;UBERON:0011143,9.14e-07,26;UBERON:0005095,9.14e-07,26;UBERON:0007687,9.14e-07,26 | |||
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| ||
|short_description=p1@DDX54 | |short_description=p1@DDX54 | ||
}} | }} |
Latest revision as of 12:14, 16 September 2015
Short description: | p1@DDX54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306014, ENST00000314045, NM_001111322, NM_024072, uc001tup.2, uc001tuq.3_5end |
EntrezGene: | DDX54 |
HGNC: | 20084 |
UniProt: | Q8TDD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.20e-24 | 253 |
embryonic cell | 5.67e-09 | 250 |
squamous epithelial cell | 6.76e-08 | 63 |
epithelial cell of nephron | 1.60e-07 | 15 |
endodermal cell | 6.91e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.12e-11 | 101 |
nephron epithelium | 1.60e-07 | 15 |
renal tubule | 1.60e-07 | 15 |
nephron tubule | 1.60e-07 | 15 |
nephron | 1.60e-07 | 15 |
uriniferous tubule | 1.60e-07 | 15 |
nephrogenic mesenchyme | 1.60e-07 | 15 |
excretory tube | 3.04e-07 | 16 |
kidney epithelium | 3.04e-07 | 16 |
trunk | 6.16e-07 | 199 |
kidney | 9.14e-07 | 26 |
kidney mesenchyme | 9.14e-07 | 26 |
upper urinary tract | 9.14e-07 | 26 |
kidney rudiment | 9.14e-07 | 26 |
kidney field | 9.14e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.13e-20 | 235 |
disease of cellular proliferation | 4.06e-20 | 239 |
cell type cancer | 5.24e-13 | 143 |
hematologic cancer | 3.27e-11 | 51 |
immune system cancer | 3.27e-11 | 51 |
carcinoma | 5.51e-11 | 106 |
organ system cancer | 9.05e-10 | 137 |
leukemia | 1.20e-08 | 39 |
myeloid leukemia | 5.20e-08 | 31 |