Personal tools

FFCP PHASE1:Mm9::chr18:64499706..64499721,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225631
|EntrezGene=225631
|HGNC=
|HGNC=
|MCL_coexpression_id=1413
|TSSclassifier=NA
|UniProt=Q6XBJ3
|UniProt=Q6XBJ3
|association_with_transcript=-280bp_to_ENSMUST00000115145_5end
|association_with_transcript=-280bp_to_ENSMUST00000115145_5end
|cluster_id=chr18:64499706..64499721,+
|description=CAGE_peak_2_at_Onecut2_5end
|description=CAGE_peak_2_at_Onecut2_5end
|id=chr18:64499706..64499721,+
|id=chr18:64499706..64499721,+
|ontology_enrichment_celltype=CL:0002563!2.40e-07!9;CL:0002251!2.40e-07!9;CL:0000066!7.29e-07!25
|ontology_enrichment_celltype=CL:0002563!2.40e-07!9;CL:0002251!2.40e-07!9;CL:0000066!7.29e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002563,2.20e-08,9;CL:0002251,2.20e-08,9;CL:0000066,4.68e-08,25;CL:0000223,1.22e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.86e-13!22;UBERON:0007499!7.86e-13!22;UBERON:0006925!7.86e-13!22;UBERON:0009497!7.86e-13!22;UBERON:0000015!7.86e-13!22;UBERON:0002423!7.86e-13!22;UBERON:0006235!7.86e-13!22;UBERON:0008835!7.86e-13!22;UBERON:0003894!7.86e-13!22;UBERON:0004161!7.86e-13!22;UBERON:0008836!7.86e-13!22;UBERON:0009854!9.44e-13!23;UBERON:0009856!9.44e-13!23;UBERON:0000160!1.88e-12!43;UBERON:0002365!1.06e-09!25;UBERON:0002330!1.06e-09!25;UBERON:0005409!2.47e-09!59;UBERON:0000344!1.05e-07!15;UBERON:0003350!2.40e-07!9;UBERON:0004808!2.40e-07!9;UBERON:0001277!2.40e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.98e-16,31;UBERON:0002107,7.62e-15,22;UBERON:0007499,7.62e-15,22;UBERON:0006925,7.62e-15,22;UBERON:0009497,7.62e-15,22;UBERON:0000015,7.62e-15,22;UBERON:0002423,7.62e-15,22;UBERON:0006235,7.62e-15,22;UBERON:0008835,7.62e-15,22;UBERON:0003894,7.62e-15,22;UBERON:0004161,7.62e-15,22;UBERON:0008836,7.62e-15,22;UBERON:0009854,9.47e-15,23;UBERON:0009856,9.47e-15,23;UBERON:0002365,7.56e-12,25;UBERON:0002330,7.56e-12,25;UBERON:0005409,1.40e-11,47;UBERON:0003350,2.20e-08,9;UBERON:0004808,2.20e-08,9;UBERON:0001277,2.20e-08,9;UBERON:0001007,6.28e-08,116;UBERON:0001555,6.28e-08,116;UBERON:0007026,6.28e-08,116;UBERON:0004119,1.85e-07,118;UBERON:0000925,1.85e-07,118;UBERON:0006595,1.85e-07,118;UBERON:0000344,2.23e-07,15;UBERON:0003929,2.76e-07,55;UBERON:0004921,4.01e-07,114
|phase1_expression=0.320297694209588,40.1321718785265,37.7649368693315,79.2456233623895,55.5994260240445,36.4298020048801,35.0418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,30.0785754851605,16.2880589557691,16.0784949952206,24.9841957772263,18.5305260109865,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,28.5963103553762,13.9637102101134,24.5003227514843,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,10.9250888864183,7.93486468908049,5.70448263155561,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.270011876663381,0.630974884054146,2.85650984403804,2.20868540951614,0.367472397644862,0.383381884072945,0,1.10115880999389,2.42605942361857,1.68967186581868,10.8146755938759,8.78281378583133,15.6274011167028,1.11673199600552,1.68828783009504,2.29197371665215,4.41942878210502,3.13217697758026,7.08317894136142,0.37863096666592,0.755715601067855,41.1607573956382,12.0459342777394,9.51959867190851,28.6042691568043,38.9865850468601,53.3151995645829,7.3031098468511,1.53387290320252,1.81850203222008,1.7666978725517,0.281686839553361,0,10.1922095882658,0,0,0,0,14.8439043634778,0,1.03909497345377,0.520455980298408,1.52232739156071,0.691846491768175,0.452167921657868,0.823120949949934,0.628332956648377,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,1.46390398505774,1.8850203613211,18.9038220854358,0,0,0,2.09706895166752,5.03250663100489,0.753926112677186,1.04294592115366,1.02286182932132,1.87009240103604,1.78465389374533,0.101839363850316,0,0,0.631325567659422,8.58794923553845,10.1156925950728,12.7844112161798,11.6042709733501,9.59314638033723,9.22418786050918,8.62055865949505,1.29351685369508,0.215567992932842,0.567318240503458,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.73376933133365,3.70456604565424,132.167513193519,24.3294521330461,5.97207101498655,9.0572302025571,19.9744565049245,19.5633018884642,22.237804384487,14.0766963323294,21.353807769503,18.9403797932613,19.3528110776208,15.7175612912509,16.3769833180061,23.3693046250098,12.3198688428576,24.6935178835415,0.189667900953082,0.571242563048644,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,39.1317467755037,6.00642380577939,6.6830058338489,8.09503604585473,8.72298521970563,6.75296047306767,7.89340140522401,16.9740721095978,13.619359049103,12.6298250066517,116.452247287157,25.3055844414582,24.0269008298212,31.0672019874947,29.6005732311155,27.0168371963486,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.12385412991454,2.22702204525186,2.78689407140348,0,0,1.17131623288992,1.93881057959519,0.477937595905104,0.445597348164788,0.849229592366497,0,0.876767573733936,0.790575555893047,0,3.54850213020672,0.178065603667255,0.162886959353576,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,9.04499026088774,1.45413491791002,2.13898427030833,0.316036757935816,0,1.03135543248187,0,2.16073312837572,1.16422815404479,0.643011105094777,0.709360934569094,0.535106452806212,1.15184314421485,0,0,0,0,0,0,0,0,0,20.6951394007194,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,2.68885594543965,2.84647253977588,8.6404272657441,2.71814784818809,5.8957892211468,1.61837215661785,4.54594006489348,0.785267825952089,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,10.7938841487544,8.77854721482268,3.41467211508268,2.67417388775123,3.5634237646757,4.59608771125035,3.55594764482584,5.15087643097235,1.92551525755089,2.52697211763797,2.5347929989024,3.77252682772152,4.12022632867483,4.8018864303652,4.53740204749345,3.81034953026459,4.05595140806994,3.08654752741928,4.12085900803307,4.41596760403192,4.80016953339582,4.43689515398344,4.05341522910446,4.21504608233753,3.57615645578256,4.48457421825885,3.65855945745545,4.47218509444333,4.20992752922171,10.1005608898393,4.38949567059444,5.1222330835293,3.6830793885272,5.88759996506671,5.20847849649082,0.999242311751784,3.04111090979031,4.51229213501426,0.382576664137687,0.441182838239031,0.231867835620421
|phase1_expression=0.320297694209588,40.1321718785265,37.7649368693315,79.2456233623895,55.5994260240445,36.4298020048801,35.0418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,30.0785754851605,16.2880589557691,16.0784949952206,24.9841957772263,18.5305260109865,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,28.5963103553762,13.9637102101134,24.5003227514843,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,10.9250888864183,7.93486468908049,5.70448263155561,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.270011876663381,0.630974884054146,2.85650984403804,2.20868540951614,0.367472397644862,0.383381884072945,0,1.10115880999389,2.42605942361857,1.68967186581868,10.8146755938759,8.78281378583133,15.6274011167028,1.11673199600552,1.68828783009504,2.29197371665215,4.41942878210502,3.13217697758026,7.08317894136142,0.37863096666592,0.755715601067855,41.1607573956382,12.0459342777394,9.51959867190851,28.6042691568043,38.9865850468601,53.3151995645829,7.3031098468511,1.53387290320252,1.81850203222008,1.7666978725517,0.281686839553361,0,10.1922095882658,0,0,0,0,14.8439043634778,0,1.03909497345377,0.520455980298408,1.52232739156071,0.691846491768175,0.452167921657868,0.823120949949934,0.628332956648377,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,1.46390398505774,1.8850203613211,18.9038220854358,0,0,0,2.09706895166752,5.03250663100489,0.753926112677186,1.04294592115366,1.02286182932132,1.87009240103604,1.78465389374533,0.101839363850316,0,0,0.631325567659422,8.58794923553845,10.1156925950728,12.7844112161798,11.6042709733501,9.59314638033723,9.22418786050918,8.62055865949505,1.29351685369508,0.215567992932842,0.567318240503458,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.73376933133365,3.70456604565424,132.167513193519,24.3294521330461,5.97207101498655,9.0572302025571,19.9744565049245,19.5633018884642,22.237804384487,14.0766963323294,21.353807769503,18.9403797932613,19.3528110776208,15.7175612912509,16.3769833180061,23.3693046250098,12.3198688428576,24.6935178835415,0.189667900953082,0.571242563048644,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,39.1317467755037,6.00642380577939,6.6830058338489,8.09503604585473,8.72298521970563,6.75296047306767,7.89340140522401,16.9740721095978,13.619359049103,12.6298250066517,116.452247287157,25.3055844414582,24.0269008298212,31.0672019874947,29.6005732311155,27.0168371963486,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.12385412991454,2.22702204525186,2.78689407140348,0,0,1.17131623288992,1.93881057959519,0.477937595905104,0.445597348164788,0.849229592366497,0,0.876767573733936,0.790575555893047,0,3.54850213020672,0.178065603667255,0.162886959353576,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,9.04499026088774,1.45413491791002,2.13898427030833,0.316036757935816,0,1.03135543248187,0,2.16073312837572,1.16422815404479,0.643011105094777,0.709360934569094,0.535106452806212,1.15184314421485,0,0,0,0,0,0,0,0,0,20.6951394007194,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,2.68885594543965,2.84647253977588,8.6404272657441,2.71814784818809,5.8957892211468,1.61837215661785,4.54594006489348,0.785267825952089,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,10.7938841487544,8.77854721482268,3.41467211508268,2.67417388775123,3.5634237646757,4.59608771125035,3.55594764482584,5.15087643097235,1.92551525755089,2.52697211763797,2.5347929989024,3.77252682772152,4.12022632867483,4.8018864303652,4.53740204749345,3.81034953026459,4.05595140806994,3.08654752741928,4.12085900803307,4.41596760403192,4.80016953339582,4.43689515398344,4.05341522910446,4.21504608233753,3.57615645578256,4.48457421825885,3.65855945745545,4.47218509444333,4.20992752922171,10.1005608898393,4.38949567059444,5.1222330835293,3.6830793885272,5.88759996506671,5.20847849649082,0.999242311751784,3.04111090979031,4.51229213501426,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p2@Onecut2
|short_description=p2@Onecut2
}}
}}

Latest revision as of 14:56, 1 October 2015

Short description:p2@Onecut2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Onecut2_5end
Coexpression cluster:MCL_coexpression_mm9:1413
Association with transcript: -280bp_to_ENSMUST00000115145_5end
EntrezGene:Onecut2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Onecut2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I637.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I379.25
CD326+ enterocyte, pool2.CNhs13197.11849-124I455.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I736.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I835.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.29
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I124.98
GP2+ M cell, pool3.CNhs13240.11847-124I218.53
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.93
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.60
Mouse hepatocyte, donor6.CNhs13090.11822-124F438.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F653.32
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.84
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H718.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C68.59
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C912.78
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C69.59
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I3132.17
intestine, adult.CNhs10496.178-9A324.33
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D59.06
intestine, embryo E15.CNhs10602.976-16D819.97
intestine, embryo E16.CNhs10585.463-22H419.56
intestine, embryo E17.CNhs10582.482-18D322.24
intestine, embryo E18.CNhs10526.1289-20F714.08
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E918.94
intestine, neonate N06.CNhs11102.688-20B819.35
intestine, neonate N07.CNhs11095.720-20F215.72
intestine, neonate N10.CNhs11098.755-23A516.38
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E312.32
intestine, neonate N30.CNhs11131.1384-42G124.69
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B239.13
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G416.97
liver, neonate N00.CNhs11117.641-24F413.62
liver, neonate N03.CNhs11123.1345-25G212.63
liver, neonate N06.CNhs11101.684-20A8116.45
liver, neonate N07.CNhs11103.716-20H225.31
liver, neonate N10.CNhs11115.751-24B924.03
liver, neonate N20.CNhs11220.823-25A331.07
liver, neonate N25.CNhs11198.1368-26H129.60
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I120.70
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D48.64
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I810.79
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell2.20e-089
epithelial cell of alimentary canal2.20e-089
epithelial cell4.68e-0825
endodermal cell1.22e-0720

Uber anatomy
Ontology termp-valuen
intestine1.98e-1631
liver7.62e-1522
epithelial sac7.62e-1522
digestive gland7.62e-1522
epithelium of foregut-midgut junction7.62e-1522
anatomical boundary7.62e-1522
hepatobiliary system7.62e-1522
foregut-midgut junction7.62e-1522
hepatic diverticulum7.62e-1522
liver primordium7.62e-1522
septum transversum7.62e-1522
liver bud7.62e-1522
digestive tract diverticulum9.47e-1523
sac9.47e-1523
exocrine gland7.56e-1225
exocrine system7.56e-1225
gastrointestinal system1.40e-1147
epithelium of mucosa2.20e-089
gastrointestinal system epithelium2.20e-089
intestinal epithelium2.20e-089
digestive system6.28e-08116
digestive tract6.28e-08116
primitive gut6.28e-08116
endoderm-derived structure1.85e-07118
endoderm1.85e-07118
presumptive endoderm1.85e-07118
mucosa2.23e-0715
gut epithelium2.76e-0755
subdivision of digestive tract4.01e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:64499706..64499721,%2B&oldid=4308374"