FFCP PHASE1:Hg19::chr12:52627019..52627037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3855 | |EntrezGene=3855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6445 | |HGNC=6445 | ||
|TSSclassifier=strong | |||
|UniProt=E7ES34 | |UniProt=E7ES34 | ||
|association_with_transcript=0bp_to_ENST00000422319_5end | |association_with_transcript=0bp_to_ENST00000422319_5end | ||
|cluster_id=chr12:52627019..52627037,+ | |||
|coexpression_cluster_id=C689 | |||
|description=CAGE_peak_1_at_KRT7_5end | |description=CAGE_peak_1_at_KRT7_5end | ||
|id=chr12:52627019..52627037,+ | |id=chr12:52627019..52627037,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.69e-41!254;CL:0000076!2.02e-13!62;CL:0000213!2.58e-13!57;CL:0000215!2.58e-13!57;CL:0002321!6.16e-12!248;CL:0000220!7.73e-12!246;CL:0000077!6.45e-10!19;CL:0000222!9.19e-09!119;CL:0002078!4.16e-08!44;CL:0002076!1.30e-07!43;CL:0002368!2.15e-07!13;CL:0002139!5.00e-07!24 | |ontology_enrichment_celltype=CL:0000066!1.69e-41!254;CL:0000076!2.02e-13!62;CL:0000213!2.58e-13!57;CL:0000215!2.58e-13!57;CL:0002321!6.16e-12!248;CL:0000220!7.73e-12!246;CL:0000077!6.45e-10!19;CL:0000222!9.19e-09!119;CL:0002078!4.16e-08!44;CL:0002076!1.30e-07!43;CL:0002368!2.15e-07!13;CL:0002139!5.00e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.26e-10;19!CL:0000213;4.49e-08;58!CL:0000215;4.49e-08;58!CL:0002368;9.73e-08;13!CL:0002139;2.82e-07;24!CL:0000076;3.95e-07;63!CL:1000449;5.77e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.08e-44,253;CL:0000213,2.24e-14,58;CL:0000215,2.24e-14,58;CL:0000076,5.61e-14,63;CL:0002321,1.77e-11,250;CL:0000077,2.27e-10,19;CL:0002078,7.85e-09,45;CL:0000222,3.13e-08,121;CL:0002076,7.35e-08,42;CL:0002368,9.74e-08,13;CL:0002139,2.85e-07,24;CL:1000449,5.74e-07,15;CL:0000115,6.99e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.16e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.32e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001048!4.43e-19!168;UBERON:0004119!2.08e-17!169;UBERON:0000925!2.08e-17!169;UBERON:0006595!2.08e-17!169;UBERON:0000464!3.62e-17!104;UBERON:0000466!1.75e-16!126;UBERON:0000077!4.24e-15!130;UBERON:0003104!2.62e-13!238;UBERON:0009142!2.62e-13!238;UBERON:0001007!1.68e-12!155;UBERON:0001555!1.68e-12!155;UBERON:0007026!1.68e-12!155;UBERON:0001041!9.03e-12!98;UBERON:0002553!2.31e-11!70;UBERON:0004921!2.37e-11!129;UBERON:0004185!2.37e-11!129;UBERON:0000065!3.74e-11!53;UBERON:0000477!5.58e-11!286;UBERON:0002100!9.01e-11!216;UBERON:0000468!1.42e-10!659;UBERON:0000119!2.04e-10!312;UBERON:0001004!2.88e-10!72;UBERON:0000483!2.97e-10!309;UBERON:0008947!3.15e-10!38;UBERON:0003258!3.15e-10!38;UBERON:0003886!3.27e-10!63;UBERON:0000481!4.17e-10!347;UBERON:0009569!1.19e-09!113;UBERON:0003064!2.15e-09!37;UBERON:0003914!2.48e-09!118;UBERON:0000467!2.78e-09!625;UBERON:0000480!4.29e-09!626;UBERON:0000064!7.20e-09!219;UBERON:0000058!7.30e-09!26;UBERON:0000063!9.07e-09!97;UBERON:0005177!1.01e-08!107;UBERON:0000072!1.71e-08!46;UBERON:0005911!3.37e-08!82;UBERON:0005153!8.47e-08!37;UBERON:0000915!1.11e-07!52;UBERON:0005631!1.20e-07!14;UBERON:0000158!1.20e-07!14;UBERON:0005085!1.23e-07!29;UBERON:0000926!1.51e-07!448;UBERON:0004120!1.51e-07!448;UBERON:0006603!1.51e-07!448;UBERON:0004111!1.78e-07!241;UBERON:0004876!3.33e-07!20;UBERON:0001008!3.48e-07!45;UBERON:0005157!3.80e-07!51;UBERON:0000475!4.09e-07!365;UBERON:0000487!5.71e-07!22;UBERON:0006554!5.71e-07!44;UBERON:0000922!8.30e-07!612;UBERON:0000080!8.42e-07!18;UBERON:0002120!8.42e-07!18;UBERON:0004875!8.42e-07!18;UBERON:0005721!8.42e-07!18;UBERON:0005754!8.42e-07!18;UBERON:0007297!8.42e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;4.28e-09;44!UBERON:0000072;4.75e-08;37!UBERON:0000487;2.83e-07;22!UBERON:0000490;3.59e-07;33!UBERON:0006555;5.77e-07;15!UBERON:0004819;5.77e-07;15!UBERON:0001285;5.77e-07;15!UBERON:0007684;5.77e-07;15!UBERON:0006914;9.38e-07;25 | |||
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| ||
|short_description=p1@KRT7 | |short_description=p1@KRT7 | ||
}} | }} |
Latest revision as of 21:57, 18 September 2015
Short description: | p1@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT7_5end |
Coexpression cluster: | C689_Alveolar_mesothelioma_Retinal_Mesothelial_Prostate_bile_Tracheal |
Association with transcript: | 0bp_to_ENST00000422319_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | E7ES34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.08e-44 | 253 |
lining cell | 2.24e-14 | 58 |
barrier cell | 2.24e-14 | 58 |
squamous epithelial cell | 5.61e-14 | 63 |
embryonic cell | 1.77e-11 | 250 |
mesothelial cell | 2.27e-10 | 19 |
meso-epithelial cell | 7.85e-09 | 45 |
mesodermal cell | 3.13e-08 | 121 |
endo-epithelial cell | 7.35e-08 | 42 |
respiratory epithelial cell | 9.74e-08 | 13 |
endothelial cell of vascular tree | 2.85e-07 | 24 |
epithelial cell of nephron | 5.74e-07 | 15 |
endothelial cell | 6.99e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.32e-07 | 106 |