FFCP PHASE1:Mm9::chr2:93292953..93292990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100038525 | |EntrezGene=100038525 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000099693,ENSMUST00000162565,ENSMUST00000163052,NR_040532,NR_040533,uc008lga.1,uc008lgb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000099693,ENSMUST00000162565,ENSMUST00000163052,NR_040532,NR_040533,uc008lga.1,uc008lgb.1_5end | ||
|cluster_id=chr2:93292953..93292990,+ | |||
|description=CAGE_peak_1_at_Gm10804_5end | |description=CAGE_peak_1_at_Gm10804_5end | ||
|id=chr2:93292953..93292990,+ | |id=chr2:93292953..93292990,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.30e-15!49;UBERON:0005173!2.30e-15!49;UBERON:0002417!2.30e-15!49;UBERON:0000916!2.30e-15!49;UBERON:0002113!1.41e-13!14;UBERON:0003918!1.41e-13!14;UBERON:0005095!1.41e-13!14;UBERON:0007687!1.41e-13!14;UBERON:0006554!2.50e-11!16;UBERON:0001008!2.08e-10!17;UBERON:0002107!7.58e-10!22;UBERON:0007499!7.58e-10!22;UBERON:0006925!7.58e-10!22;UBERON:0009497!7.58e-10!22;UBERON:0000015!7.58e-10!22;UBERON:0002423!7.58e-10!22;UBERON:0006235!7.58e-10!22;UBERON:0008835!7.58e-10!22;UBERON:0003894!7.58e-10!22;UBERON:0004161!7.58e-10!22;UBERON:0008836!7.58e-10!22;UBERON:0009569!1.54e-09!66;UBERON:0009854!3.30e-09!23;UBERON:0009856!3.30e-09!23;UBERON:0002365!4.31e-08!25;UBERON:0002330!4.31e-08!25;UBERON:0000489!1.22e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.73e-21,14;UBERON:0003918,8.73e-21,14;UBERON:0011143,8.73e-21,14;UBERON:0005095,8.73e-21,14;UBERON:0007687,8.73e-21,14;UBERON:0006554,9.95e-16,18;UBERON:0001008,8.50e-15,19;UBERON:0005172,2.25e-14,49;UBERON:0005173,2.25e-14,49;UBERON:0002417,2.25e-14,49;UBERON:0000916,2.25e-14,49;UBERON:0000489,3.36e-13,21;UBERON:0003104,8.05e-11,61;UBERON:0009142,8.05e-11,61;UBERON:0009569,1.01e-09,66;UBERON:0005177,1.58e-07,79 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.436839843869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,2.68816132258401,5.75822122540183,0,0,0,0.985903938436763,0,0,0,0,0,0,11.9893073705013,0,0,0.173485326766136,0.304465478312141,0,0,0,0,2.47194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.77320476793256,6.45387278794696,4.22518283305254,2.28270751335071,0,1.97638745668813,1.50801125280162,1.79060824837036,1.16978452271472,0,0,0,1.13800740571849,2.85621281524322,6.76246414038483,12.2190796707189,15.1282939990748,13.6063490587218,50.9686489221514,115.431135720049,129.994946652658,130.1840079375,0.296452627087149,0,0.786235980452812,0.449724224769707,0.608580364165509,1.4470629585145,0.50925170356284,0.575392274901621,6.48540907100142,1.09824565275233,5.75072826109418,7.44281895337007,0.624075346229121,0,0,13.0259750768109,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0,0.760437899670719,1.13175804831646,0.187283014939765,0.384150914429216,0.861532034334199,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.735994600671987,0,0.354951612318675,0,1.0174249164263,0.282328141245992,0.507687647350059,0,0.526139422875686,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0.233931608445408,2.57845264857958,0,0.220591419119515,0 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.436839843869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,2.68816132258401,5.75822122540183,0,0,0,0.985903938436763,0,0,0,0,0,0,11.9893073705013,0,0,0.173485326766136,0.304465478312141,0,0,0,0,2.47194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.77320476793256,6.45387278794696,4.22518283305254,2.28270751335071,0,1.97638745668813,1.50801125280162,1.79060824837036,1.16978452271472,0,0,0,1.13800740571849,2.85621281524322,6.76246414038483,12.2190796707189,15.1282939990748,13.6063490587218,50.9686489221514,115.431135720049,129.994946652658,130.1840079375,0.296452627087149,0,0.786235980452812,0.449724224769707,0.608580364165509,1.4470629585145,0.50925170356284,0.575392274901621,6.48540907100142,1.09824565275233,5.75072826109418,7.44281895337007,0.624075346229121,0,0,13.0259750768109,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0,0.760437899670719,1.13175804831646,0.187283014939765,0.384150914429216,0.861532034334199,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.735994600671987,0,0.354951612318675,0,1.0174249164263,0.282328141245992,0.507687647350059,0,0.526139422875686,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0.233931608445408,2.57845264857958,0,0.220591419119515,0 | ||
|short_description=p1@Gm10804 | |short_description=p1@Gm10804 | ||
}} | }} |
Latest revision as of 03:39, 27 September 2015
Short description: | p1@Gm10804 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10804_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000099693, ENSMUST00000162565, ENSMUST00000163052, NR_040532, NR_040533, uc008lga.1, uc008lgb.1_5end |
EntrezGene: | Gm10804 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 8.73e-21 | 14 |
kidney mesenchyme | 8.73e-21 | 14 |
upper urinary tract | 8.73e-21 | 14 |
kidney rudiment | 8.73e-21 | 14 |
kidney field | 8.73e-21 | 14 |
urinary system structure | 9.95e-16 | 18 |
renal system | 8.50e-15 | 19 |
abdomen element | 2.25e-14 | 49 |
abdominal segment element | 2.25e-14 | 49 |
abdominal segment of trunk | 2.25e-14 | 49 |
abdomen | 2.25e-14 | 49 |
cavitated compound organ | 3.36e-13 | 21 |
mesenchyme | 8.05e-11 | 61 |
entire embryonic mesenchyme | 8.05e-11 | 61 |
subdivision of trunk | 1.01e-09 | 66 |
trunk region element | 1.58e-07 | 79 |