FFCP PHASE1:Mm9::chr10:79100654..79100667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216148 | |EntrezGene=216148 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=E9QLZ0,Q8BMC3 | |UniProt=E9QLZ0,Q8BMC3 | ||
|association_with_transcript=0bp_to_ENSMUST00000020564,ENSMUST00000163867,NM_001024539,uc007fzd.2_5end | |association_with_transcript=0bp_to_ENSMUST00000020564,ENSMUST00000163867,NM_001024539,uc007fzd.2_5end | ||
|cluster_id=chr10:79100654..79100667,- | |||
|description=CAGE_peak_2_at_Shc2_5end | |description=CAGE_peak_2_at_Shc2_5end | ||
|id=chr10:79100654..79100667,- | |id=chr10:79100654..79100667,- | ||
|ontology_enrichment_celltype=CL:0000540!2.23e-19!33;CL:0000047!2.23e-19!33;CL:0000031!2.23e-19!33;CL:0000404!2.23e-19!33;CL:0000221!4.32e-19!44;CL:0000133!4.32e-19!44;CL:0002319!5.45e-19!43;CL:0000393!4.29e-18!39;CL:0000211!4.29e-18!39;CL:0000117!9.89e-18!23;CL:0000337!9.89e-18!23;CL:0000055!2.07e-17!50;CL:0002321!1.56e-07!70;CL:0000220!1.56e-07!70 | |ontology_enrichment_celltype=CL:0000540!2.23e-19!33;CL:0000047!2.23e-19!33;CL:0000031!2.23e-19!33;CL:0000404!2.23e-19!33;CL:0000221!4.32e-19!44;CL:0000133!4.32e-19!44;CL:0002319!5.45e-19!43;CL:0000393!4.29e-18!39;CL:0000211!4.29e-18!39;CL:0000117!9.89e-18!23;CL:0000337!9.89e-18!23;CL:0000055!2.07e-17!50;CL:0002321!1.56e-07!70;CL:0000220!1.56e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-47,23;CL:0000337,1.76e-47,23;CL:0000540,3.96e-34,33;CL:0000047,3.96e-34,33;CL:0000031,3.96e-34,33;CL:0000404,3.96e-34,33;CL:0002319,3.39e-29,43;CL:0000221,2.22e-28,44;CL:0000133,2.22e-28,44;CL:0000393,6.66e-28,39;CL:0000211,6.66e-28,39;CL:0002321,2.30e-15,70;CL:0002609,2.00e-12,6;CL:0000723,2.57e-10,91;CL:0000048,2.57e-10,91;CL:0000034,2.75e-09,97;CL:0000120,5.47e-08,3;CL:0002613,1.66e-07,3;CL:0002612,1.75e-07,3;CL:0002614,1.93e-07,3;CL:0002608,2.23e-07,3;CL:0002610,3.30e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.21e-26!75;UBERON:0001016!2.21e-26!75;UBERON:0001017!5.00e-26!73;UBERON:0005743!5.00e-26!73;UBERON:0004121!1.97e-22!102;UBERON:0000924!1.97e-22!102;UBERON:0006601!1.97e-22!102;UBERON:0002346!3.14e-17!71;UBERON:0003075!3.14e-17!71;UBERON:0007284!3.14e-17!71;UBERON:0001049!4.13e-16!52;UBERON:0005068!4.13e-16!52;UBERON:0006241!4.13e-16!52;UBERON:0007135!4.13e-16!52;UBERON:0002020!4.28e-16!34;UBERON:0000033!3.62e-15!63;UBERON:0000955!6.61e-15!50;UBERON:0006238!6.61e-15!50;UBERON:0002616!2.59e-14!49;UBERON:0003056!7.31e-14!49;UBERON:0003080!5.01e-13!40;UBERON:0002780!1.31e-12!39;UBERON:0001890!1.31e-12!39;UBERON:0006240!1.31e-12!39;UBERON:0002791!1.75e-12!29;UBERON:0003528!1.75e-12!29;UBERON:0001893!1.75e-12!29;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0000153!9.20e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!2.21e-26!75;UBERON:0001016!2.21e-26!75;UBERON:0001017!5.00e-26!73;UBERON:0005743!5.00e-26!73;UBERON:0004121!1.97e-22!102;UBERON:0000924!1.97e-22!102;UBERON:0006601!1.97e-22!102;UBERON:0002346!3.14e-17!71;UBERON:0003075!3.14e-17!71;UBERON:0007284!3.14e-17!71;UBERON:0001049!4.13e-16!52;UBERON:0005068!4.13e-16!52;UBERON:0006241!4.13e-16!52;UBERON:0007135!4.13e-16!52;UBERON:0002020!4.28e-16!34;UBERON:0000033!3.62e-15!63;UBERON:0000955!6.61e-15!50;UBERON:0006238!6.61e-15!50;UBERON:0002616!2.59e-14!49;UBERON:0003056!7.31e-14!49;UBERON:0003080!5.01e-13!40;UBERON:0002780!1.31e-12!39;UBERON:0001890!1.31e-12!39;UBERON:0006240!1.31e-12!39;UBERON:0002791!1.75e-12!29;UBERON:0003528!1.75e-12!29;UBERON:0001893!1.75e-12!29;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0000153!9.20e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.15e-35,73;UBERON:0002020,1.27e-34,34;UBERON:0001016,4.62e-34,75;UBERON:0000073,1.20e-31,54;UBERON:0001049,4.32e-26,52;UBERON:0005068,4.32e-26,52;UBERON:0006241,4.32e-26,52;UBERON:0007135,4.32e-26,52;UBERON:0004121,4.29e-25,95;UBERON:0000924,4.29e-25,95;UBERON:0006601,4.29e-25,95;UBERON:0003528,5.50e-25,29;UBERON:0002791,5.50e-25,29;UBERON:0001893,5.50e-25,29;UBERON:0002780,3.67e-21,39;UBERON:0001890,3.67e-21,39;UBERON:0006240,3.67e-21,39;UBERON:0003080,1.71e-20,40;UBERON:0000955,3.79e-20,47;UBERON:0006238,3.79e-20,47;UBERON:0002346,6.90e-20,64;UBERON:0003075,6.90e-20,64;UBERON:0007284,6.90e-20,64;UBERON:0002616,8.16e-19,46;UBERON:0010371,1.40e-16,73;UBERON:0003056,1.04e-15,49;UBERON:0000956,9.16e-14,21;UBERON:0001869,9.16e-14,21;UBERON:0000203,9.16e-14,21;UBERON:0002420,1.94e-13,8;UBERON:0007245,1.94e-13,8;UBERON:0010009,1.94e-13,8;UBERON:0010011,1.94e-13,8;UBERON:0000454,1.94e-13,8;UBERON:0010314,9.69e-12,92;UBERON:0001948,9.84e-12,5;UBERON:0002315,9.84e-12,5;UBERON:0002240,1.08e-09,6;UBERON:0005174,1.08e-09,6;UBERON:0001137,1.08e-09,6;UBERON:0011216,1.30e-08,194;UBERON:0002619,1.93e-08,17;UBERON:0000025,3.46e-08,114;UBERON:0000369,9.89e-08,5;UBERON:0002435,9.89e-08,5;UBERON:0000204,9.89e-08,5;UBERON:0010082,9.89e-08,5;UBERON:0002257,1.75e-07,3;UBERON:0002038,1.93e-07,3;UBERON:0009663,1.93e-07,3;UBERON:0009661,1.93e-07,3;UBERON:0000125,1.93e-07,3;UBERON:0002308,1.93e-07,3;UBERON:0001954,2.15e-07,7;UBERON:0003022,2.15e-07,7;UBERON:0002421,2.15e-07,7;UBERON:0000349,2.15e-07,7;UBERON:0002600,2.15e-07,7;UBERON:0004111,3.19e-07,122;UBERON:0004684,3.30e-07,3;UBERON:0002275,3.30e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,4.04632921719196,3.70293685490423,3.80298842103708,0,0,0,0,0,0.898800331555214,1.15265491596466,1.24427534770173,2.43010688997043,1.26194976810829,4.28476476605705,3.3130281142742,1.46988959057945,2.30029130443767,6.43453150627015,2.20231761998777,2.17068474744819,2.30409799884365,2.2420668914133,4.66586982372289,2.08365348222704,2.23346399201105,2.8138130501584,2.59757021220577,3.24091444021034,3.27454865837937,2.05039390407831,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.693941307064543,0,0,0.452167921657868,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0,0,0,0,1.17112318804619,0,0,0,0,0,0.748953197024114,0.457500602818626,4.39790232395025,1.04294592115366,1.27857728665165,1.0389402227978,1.62241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.272145996605311,0.896796041993948,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.556094498451196,0,0,1.19420560091096,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,1.05144974282064,1.64647379806855,0,0,1.2797295032114,0.928946687441754,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.571242563048644,0,0,0.581857461502877,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,0.584511715822624,0,1.60660658210904,0,0.178065603667255,0.651547837414304,0,0,0.971122544619926,0,0,0,1.22974059177571,0.516856586336442,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0.66183396182839,0.194451188344048,0.774958940866387,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,1.84130094602871,0,1.89038500578056,0.685082519770642,0.755393897389701,0,0.900642406448441,0,3.10656187051092,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,0,0.25347929989024,0.188626341386076,1.03005658216871,0.256100609619477,0.229741875822453,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.929621047115796,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,4.04632921719196,3.70293685490423,3.80298842103708,0,0,0,0,0,0.898800331555214,1.15265491596466,1.24427534770173,2.43010688997043,1.26194976810829,4.28476476605705,3.3130281142742,1.46988959057945,2.30029130443767,6.43453150627015,2.20231761998777,2.17068474744819,2.30409799884365,2.2420668914133,4.66586982372289,2.08365348222704,2.23346399201105,2.8138130501584,2.59757021220577,3.24091444021034,3.27454865837937,2.05039390407831,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.693941307064543,0,0,0.452167921657868,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0,0,0,0,1.17112318804619,0,0,0,0,0,0.748953197024114,0.457500602818626,4.39790232395025,1.04294592115366,1.27857728665165,1.0389402227978,1.62241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.272145996605311,0.896796041993948,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.556094498451196,0,0,1.19420560091096,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,1.05144974282064,1.64647379806855,0,0,1.2797295032114,0.928946687441754,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.571242563048644,0,0,0.581857461502877,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,0.584511715822624,0,1.60660658210904,0,0.178065603667255,0.651547837414304,0,0,0.971122544619926,0,0,0,1.22974059177571,0.516856586336442,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0.66183396182839,0.194451188344048,0.774958940866387,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,1.84130094602871,0,1.89038500578056,0.685082519770642,0.755393897389701,0,0.900642406448441,0,3.10656187051092,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,0,0.25347929989024,0.188626341386076,1.03005658216871,0.256100609619477,0.229741875822453,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.929621047115796,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p2@Shc2 | |short_description=p2@Shc2 | ||
}} | }} |
Latest revision as of 08:47, 26 September 2015
Short description: | p2@Shc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Shc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000020564, ENSMUST00000163867, NM_001024539, uc007fzd.2_5end |
EntrezGene: | Shc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-47 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-47 | 23 |
neuron | 3.96e-34 | 33 |
neuronal stem cell | 3.96e-34 | 33 |
neuroblast | 3.96e-34 | 33 |
electrically signaling cell | 3.96e-34 | 33 |
neural cell | 3.39e-29 | 43 |
ectodermal cell | 2.22e-28 | 44 |
neurectodermal cell | 2.22e-28 | 44 |
electrically responsive cell | 6.66e-28 | 39 |
electrically active cell | 6.66e-28 | 39 |
embryonic cell | 2.30e-15 | 70 |
neuron of cerebral cortex | 2.00e-12 | 6 |
somatic stem cell | 2.57e-10 | 91 |
multi fate stem cell | 2.57e-10 | 91 |
stem cell | 2.75e-09 | 97 |
granule cell | 5.47e-08 | 3 |
striatum neuron | 1.66e-07 | 3 |
neuron of the ventral spinal cord | 1.75e-07 | 3 |
neuron of the substantia nigra | 1.93e-07 | 3 |
hippocampal neuron | 2.23e-07 | 3 |
raphe nuclei neuron | 3.30e-07 | 3 |