FFCP PHASE1:Mm9::chr1:166388667..166388678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:166388667..166388678,+ | |||
|description=CAGE_peak_at_chr1:166388667..166388678,+ | |description=CAGE_peak_at_chr1:166388667..166388678,+ | ||
|id=chr1:166388667..166388678,+ | |id=chr1:166388667..166388678,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.01e-09!9;CL:0002251!1.01e-09!9;CL:0000075!6.98e-08!7;CL:0000239!4.91e-07!6;CL:0000677!4.91e-07!6;CL:0000212!4.91e-07!6;CL:0000584!4.91e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.01e-09!9;CL:0002251!1.01e-09!9;CL:0000075!6.98e-08!7;CL:0000239!4.91e-07!6;CL:0000677!4.91e-07!6;CL:0000212!4.91e-07!6;CL:0000584!4.91e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.54e-34,9;CL:0002251,7.54e-34,9;CL:0000075,7.51e-25,7;CL:0000239,1.04e-20,6;CL:0000677,1.04e-20,6;CL:0000584,1.04e-20,6;CL:0002076,6.10e-20,15;CL:0000066,5.55e-18,25;CL:0002250,7.10e-15,3;CL:0000223,1.04e-14,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.55e-12!15;UBERON:0001242!7.10e-11!13;UBERON:0000060!7.10e-11!13;UBERON:0001262!7.10e-11!13;UBERON:0004786!7.10e-11!13;UBERON:0005409!1.07e-10!59;UBERON:0000485!1.62e-10!11;UBERON:0000160!2.14e-10!43;UBERON:0003350!1.01e-09!9;UBERON:0004808!1.01e-09!9;UBERON:0001277!1.01e-09!9;UBERON:0004923!1.28e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.49e-36,13;UBERON:0001262,8.49e-36,13;UBERON:0004786,8.49e-36,13;UBERON:0000485,1.63e-34,11;UBERON:0003350,7.54e-34,9;UBERON:0004808,7.54e-34,9;UBERON:0001277,7.54e-34,9;UBERON:0000344,7.61e-31,15;UBERON:0000160,4.71e-28,31;UBERON:0004923,1.30e-22,24;UBERON:0005409,8.76e-18,47 | |||
|phase1_expression=0.160148847104794,5.58360652222978,5.91499011206397,9.0739263392049,5.50985302940982,1.6787927191189,0.934450562382103,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0.430761996159075,1.939241094173,1.33016393619462,0.756090389279792,0,0,0,0,3.17736781726402,1.16364251750945,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.383062014255563,0,0,0.365950574409639,0.52091337055676,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0.186399445825301,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0.210289948564127,0,1.32167513193519,1.05780226665418,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.760902504450237,1.89811624617805,0.494096864172033,0.251335208800269,0.397912944082302,0.58489226135736,0,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.631222379012867,0.126473074248515,0.295220295959204,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0.164140899745061,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.523511883968059,0.388844919875379,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,5.58360652222978,5.91499011206397,9.0739263392049,5.50985302940982,1.6787927191189,0.934450562382103,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0.430761996159075,1.939241094173,1.33016393619462,0.756090389279792,0,0,0,0,3.17736781726402,1.16364251750945,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.383062014255563,0,0,0.365950574409639,0.52091337055676,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0.186399445825301,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0.210289948564127,0,1.32167513193519,1.05780226665418,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.760902504450237,1.89811624617805,0.494096864172033,0.251335208800269,0.397912944082302,0.58489226135736,0,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.631222379012867,0.126473074248515,0.295220295959204,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0.164140899745061,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.523511883968059,0.388844919875379,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr1:166388667..166388678,+ | |short_description=p@chr1:166388667..166388678,+ | ||
}} | }} |
Latest revision as of 03:59, 5 August 2015
Short description: | p@chr1:166388667..166388678, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:166388667..166388678, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.54e-34 | 9 |
epithelial cell of alimentary canal | 7.54e-34 | 9 |
columnar/cuboidal epithelial cell | 7.51e-25 | 7 |
brush border epithelial cell | 1.04e-20 | 6 |
gut absorptive cell | 1.04e-20 | 6 |
enterocyte | 1.04e-20 | 6 |
endo-epithelial cell | 6.10e-20 | 15 |
epithelial cell | 5.55e-18 | 25 |
intestinal crypt stem cell | 7.10e-15 | 3 |
endodermal cell | 1.04e-14 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.49e-36 | 13 |
wall of intestine | 8.49e-36 | 13 |
gastrointestinal system mucosa | 8.49e-36 | 13 |
simple columnar epithelium | 1.63e-34 | 11 |
epithelium of mucosa | 7.54e-34 | 9 |
gastrointestinal system epithelium | 7.54e-34 | 9 |
intestinal epithelium | 7.54e-34 | 9 |
mucosa | 7.61e-31 | 15 |
intestine | 4.71e-28 | 31 |
organ component layer | 1.30e-22 | 24 |
gastrointestinal system | 8.76e-18 | 47 |