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FFCP PHASE1:Mm9::chr3:69526011..69526023,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=97112
|EntrezGene=97112
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000127211_5end
|association_with_transcript=0bp_to_ENSMUST00000127211_5end
|cluster_id=chr3:69526011..69526023,+
|description=CAGE_peak_2_at_Nmd3_5end
|description=CAGE_peak_2_at_Nmd3_5end
|id=chr3:69526011..69526023,+
|id=chr3:69526011..69526023,+
|ontology_enrichment_celltype=CL:0000542!2.50e-08!13;CL:0000051!2.50e-08!13;CL:0000838!4.44e-08!12;CL:0000084!1.59e-07!11;CL:0000827!1.59e-07!11;CL:0000791!5.85e-07!9;CL:0000789!5.85e-07!9;CL:0002420!5.85e-07!9;CL:0002419!5.85e-07!9;CL:0000790!5.85e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,3.28e-18,9;CL:0000789,3.28e-18,9;CL:0002420,3.28e-18,9;CL:0002419,3.28e-18,9;CL:0000790,3.28e-18,9;CL:0000624,2.55e-16,8;CL:0000838,3.26e-16,12;CL:0000988,8.75e-16,32;CL:0002032,8.75e-16,32;CL:0000037,8.75e-16,32;CL:0000837,8.75e-16,32;CL:0000542,8.55e-15,13;CL:0000051,8.55e-15,13;CL:0000084,1.49e-14,11;CL:0000827,1.49e-14,11;CL:0002320,4.79e-14,46;CL:0000134,4.79e-14,46;CL:0000738,3.52e-13,17;CL:0002087,3.52e-13,17;CL:0000893,9.17e-13,6;CL:0002489,9.17e-13,6;CL:0000898,9.17e-13,6;CL:0000809,9.17e-13,6;CL:0000810,9.17e-13,6;CL:0000895,9.17e-13,6;CL:0000808,9.17e-13,6;CL:0000894,9.17e-13,6;CL:0000806,9.17e-13,6;CL:0000807,9.17e-13,6;CL:0000805,9.17e-13,6;CL:0002425,9.17e-13,6;CL:0002436,9.17e-13,6;CL:0002427,9.17e-13,6;CL:0002428,9.17e-13,6;CL:0002429,9.17e-13,6;CL:0002433,9.17e-13,6;CL:0002431,9.17e-13,6;CL:0002432,9.17e-13,6;CL:0000034,1.41e-11,97;CL:0000219,3.25e-11,54;CL:0002031,9.13e-10,25;CL:0000723,1.40e-07,91;CL:0000048,1.40e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.79e-14,46
|phase1_expression=0.160148847104794,0,0.454999239389536,0.60492842261366,2.00358291978539,0.503637815735669,0.233612640595526,1.16210991097419,11.1223090499817,16.1504523162175,2.73948749160808,1.19658238493005,1.36960583944965,1.13646523144697,0,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0,0.510259740906419,0.595745707205312,0.783599367416806,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.221730510655305,1.27006134691926,0,0,0.288851619751275,0.664938581433969,0.408338712524738,1.25559489221072,0,0,0.588231488031014,2.04913645487534,0.971020706062307,0.125896817975577,1.21652317463417,1.10128051297009,0.782391344348039,0,0,0,0,0,1.34226084846189,2.17608642603403,1.68046899571232,0.514518872071894,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.153606533256243,0.395658863190582,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0,0.454357159999104,0.226714680320357,2.89864488701678,0,1.3599426674155,1.07940638327563,0,0,0.421333260395256,0,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0.255457055208591,1.7972268675888,3.59941638596045,1.65191295194984,0.299581278809645,0.457500602818626,0.502617408451458,0.347648640384553,0,0,0,0.203678727700633,0.124406970610093,0.505445516867349,0,0.130120442962704,0.459804208866946,0.720248519221397,0.150704817835715,0.408218994907967,0.2562274405697,0.281105173679186,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,2.31613116403244,1.98914449576915,0.414251545071004,0.234526059981096,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0.16455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0,0,0.210289948564127,0.308713837137853,0,0.264450566663544,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.581857461502877,0.350679099451593,0.505892296994058,0,0,0,1.48226313543574,0.667380422864376,0.589676985339609,0,0.608580364165509,0.241177159752417,0.25462585178142,0,0,0.274561413188081,1.43768206527355,1.11642284300551,0.936113019343682,0.757736633841335,0.538192240565737,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.491589944147214,0,0,1.50791283939272,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.534196811001766,0.325773918707152,0.659880491890142,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0.532020700926821,0.356737635204141,0,0.304464949114599,0.938686832254841,0.21183207086382,0,0.65954501176592,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.370850604021019,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.228778173206523,1.69978429993855,3.35883485576779,1.93479963326193,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.578574190077352,0.785267825952089,0.129614973291793,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,1.01373675294467,0.234714477291508,0.39061315453185,0.838874755405687,2.17425708743405,0,0.948033361884535,0.405450430580328,0.308132871494482,0.25984164595559,0,1.39076948346885,0.240390899039938,0.295379054349154,0.504832249740738,0.304827226619999,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,1.33191572024439,1.34570784914214,0.671538465456314,0.772758376128762,0.563047426353546,0.36630324853453,0.214368379079066,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0.415149390336707,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0,0.256100609619477,0,0.476293691283074,0,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0,1.12228454331548,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0.454999239389536,0.60492842261366,2.00358291978539,0.503637815735669,0.233612640595526,1.16210991097419,11.1223090499817,16.1504523162175,2.73948749160808,1.19658238493005,1.36960583944965,1.13646523144697,0,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0,0.510259740906419,0.595745707205312,0.783599367416806,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.221730510655305,1.27006134691926,0,0,0.288851619751275,0.664938581433969,0.408338712524738,1.25559489221072,0,0,0.588231488031014,2.04913645487534,0.971020706062307,0.125896817975577,1.21652317463417,1.10128051297009,0.782391344348039,0,0,0,0,0,1.34226084846189,2.17608642603403,1.68046899571232,0.514518872071894,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.153606533256243,0.395658863190582,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0,0.454357159999104,0.226714680320357,2.89864488701678,0,1.3599426674155,1.07940638327563,0,0,0.421333260395256,0,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0.255457055208591,1.7972268675888,3.59941638596045,1.65191295194984,0.299581278809645,0.457500602818626,0.502617408451458,0.347648640384553,0,0,0,0.203678727700633,0.124406970610093,0.505445516867349,0,0.130120442962704,0.459804208866946,0.720248519221397,0.150704817835715,0.408218994907967,0.2562274405697,0.281105173679186,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,2.31613116403244,1.98914449576915,0.414251545071004,0.234526059981096,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0.16455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0,0,0.210289948564127,0.308713837137853,0,0.264450566663544,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.581857461502877,0.350679099451593,0.505892296994058,0,0,0,1.48226313543574,0.667380422864376,0.589676985339609,0,0.608580364165509,0.241177159752417,0.25462585178142,0,0,0.274561413188081,1.43768206527355,1.11642284300551,0.936113019343682,0.757736633841335,0.538192240565737,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.491589944147214,0,0,1.50791283939272,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.534196811001766,0.325773918707152,0.659880491890142,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0.532020700926821,0.356737635204141,0,0.304464949114599,0.938686832254841,0.21183207086382,0,0.65954501176592,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.370850604021019,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.228778173206523,1.69978429993855,3.35883485576779,1.93479963326193,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.578574190077352,0.785267825952089,0.129614973291793,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,1.01373675294467,0.234714477291508,0.39061315453185,0.838874755405687,2.17425708743405,0,0.948033361884535,0.405450430580328,0.308132871494482,0.25984164595559,0,1.39076948346885,0.240390899039938,0.295379054349154,0.504832249740738,0.304827226619999,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,1.33191572024439,1.34570784914214,0.671538465456314,0.772758376128762,0.563047426353546,0.36630324853453,0.214368379079066,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0.415149390336707,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0,0.256100609619477,0,0.476293691283074,0,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0,1.12228454331548,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0.4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|short_description=p2@Nmd3
|short_description=p2@Nmd3
}}
}}

Latest revision as of 16:38, 25 September 2015

Short description:p2@Nmd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nmd3_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_ENSMUST00000127211_5end
EntrezGene:Nmd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nmd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.28e-189
alpha-beta T cell3.28e-189
immature T cell3.28e-189
mature T cell3.28e-189
immature alpha-beta T cell3.28e-189
CD4-positive, alpha-beta T cell2.55e-168
lymphoid lineage restricted progenitor cell3.26e-1612
hematopoietic cell8.75e-1632
hematopoietic oligopotent progenitor cell8.75e-1632
hematopoietic stem cell8.75e-1632
hematopoietic multipotent progenitor cell8.75e-1632
lymphocyte8.55e-1513
common lymphoid progenitor8.55e-1513
T cell1.49e-1411
pro-T cell1.49e-1411
connective tissue cell4.79e-1446
mesenchymal cell4.79e-1446
leukocyte3.52e-1317
nongranular leukocyte3.52e-1317
thymocyte9.17e-136
double negative thymocyte9.17e-136
naive T cell9.17e-136
double-positive, alpha-beta thymocyte9.17e-136
CD4-positive, alpha-beta thymocyte9.17e-136
naive thymus-derived CD4-positive, alpha-beta T cell9.17e-136
DN4 thymocyte9.17e-136
DN1 thymic pro-T cell9.17e-136
DN2 thymocyte9.17e-136
DN3 thymocyte9.17e-136
immature single positive thymocyte9.17e-136
early T lineage precursor9.17e-136
mature CD4 single-positive thymocyte9.17e-136
resting double-positive thymocyte9.17e-136
double-positive blast9.17e-136
CD69-positive double-positive thymocyte9.17e-136
CD69-positive, CD4-positive single-positive thymocyte9.17e-136
CD4-positive, CD8-intermediate double-positive thymocyte9.17e-136
CD24-positive, CD4 single-positive thymocyte9.17e-136
stem cell1.41e-1197
motile cell3.25e-1154
hematopoietic lineage restricted progenitor cell9.13e-1025
somatic stem cell1.40e-0791
multi fate stem cell1.40e-0791

Uber anatomy
Ontology termp-valuen
connective tissue4.79e-1446
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