FFCP PHASE1:Hg19::chr13:109248250..109248253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23026 | |EntrezGene=23026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29822 | |HGNC=29822 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6X6,F8WBZ5 | |UniProt=Q9Y6X6,F8WBZ5 | ||
|association_with_transcript=-246bp_to_ENST00000356711,ENST00000397258,NM_015011,uc001vqt.1_5end | |association_with_transcript=-246bp_to_ENST00000356711,ENST00000397258,NM_015011,uc001vqt.1_5end | ||
|cluster_id=chr13:109248250..109248253,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_13_at_MYO16_5end | |description=CAGE_peak_13_at_MYO16_5end | ||
|id=chr13:109248250..109248253,+ | |id=chr13:109248250..109248253,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.56e-16!57;UBERON:0005068!1.56e-16!57;UBERON:0006241!1.56e-16!57;UBERON:0007135!1.56e-16!57;UBERON:0002346!4.38e-16!90;UBERON:0002616!7.75e-16!59;UBERON:0003075!2.16e-15!86;UBERON:0007284!2.16e-15!86;UBERON:0000955!2.52e-14!69;UBERON:0006238!2.52e-14!69;UBERON:0000073!2.19e-13!94;UBERON:0001016!2.19e-13!94;UBERON:0001017!6.38e-13!82;UBERON:0002780!1.54e-12!41;UBERON:0001890!1.54e-12!41;UBERON:0006240!1.54e-12!41;UBERON:0003080!3.52e-12!42;UBERON:0005743!4.05e-12!86;UBERON:0000988!2.62e-11!3;UBERON:0000924!5.38e-11!173;UBERON:0006601!5.38e-11!173;UBERON:0002020!7.32e-11!34;UBERON:0003528!7.32e-11!34;UBERON:0001893!8.31e-11!34;UBERON:0004121!2.17e-10!169;UBERON:0000956!2.35e-10!25;UBERON:0000203!2.35e-10!25;UBERON:0003056!2.56e-10!61;UBERON:0001869!1.25e-09!32;UBERON:0004732!1.61e-09!13;UBERON:0001905!1.85e-09!2;UBERON:0002757!1.85e-09!2;UBERON:0010134!1.85e-09!2;UBERON:0002784!1.85e-09!2;UBERON:0005408!1.85e-09!2;UBERON:0001899!1.85e-09!2;UBERON:0007023!2.40e-09!115;UBERON:0002791!3.16e-09!33;UBERON:0000033!4.78e-09!123;UBERON:0001954!8.64e-09!2;UBERON:0003022!8.64e-09!2;UBERON:0002421!8.64e-09!2;UBERON:0002600!8.64e-09!2;UBERON:0005162!1.42e-08!2;UBERON:0000122!1.42e-08!2;UBERON:0000153!2.08e-08!129;UBERON:0007811!2.08e-08!129;UBERON:0002148!3.14e-08!2;UBERON:0009662!3.14e-08!2;UBERON:0000349!1.02e-07!5;UBERON:0002619!2.79e-07!22;UBERON:0002298!3.24e-07!8;UBERON:0004733!3.66e-07!12;UBERON:0002028!3.66e-07!12;UBERON:0007277!3.66e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0001894;1.14e-23;7!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0002368;3.89e-10;33!UBERON:0000949;4.08e-09;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001781,3.42e-11,4;UBERON:0002368,5.30e-11,35;UBERON:0000949,9.88e-09,45;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0002530,7.84e-07,59 | |||
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| ||
|short_description=p13@MYO16 | |short_description=p13@MYO16 | ||
}} | }} |
Latest revision as of 11:17, 16 September 2015
Short description: | p13@MYO16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MYO16_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -246bp_to_ENST00000356711, ENST00000397258, NM_015011, uc001vqt.1_5end |
EntrezGene: | MYO16 |
HGNC: | 29822 |
UniProt: | Q9Y6X6F8WBZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
layer of retina | 3.42e-11 | 4 |
endocrine gland | 5.30e-11 | 35 |
endocrine system | 9.88e-09 | 45 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
gland | 7.84e-07 | 59 |