Personal tools

FFCP PHASE1:Mm9::chr4:130348609..130348635,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20970
|EntrezGene=20970
|HGNC=
|HGNC=
|MCL_coexpression_id=1801
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000146093_5end
|association_with_transcript=0bp_to_ENSMUST00000146093_5end
|cluster_id=chr4:130348609..130348635,+
|description=CAGE_peak_5_at_Sdc3_5end
|description=CAGE_peak_5_at_Sdc3_5end
|id=chr4:130348609..130348635,+
|id=chr4:130348609..130348635,+
|ontology_enrichment_celltype=CL:0000117!1.61e-13!23;CL:0000337!1.61e-13!23;CL:0002319!3.99e-13!43;CL:0000055!9.84e-13!50;CL:0000393!1.15e-12!39;CL:0000211!1.15e-12!39;CL:0000540!1.46e-12!33;CL:0000047!1.46e-12!33;CL:0000031!1.46e-12!33;CL:0000404!1.46e-12!33;CL:0000221!2.17e-12!44;CL:0000133!2.17e-12!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-14,23;CL:0000337,1.85e-14,23;CL:0002319,1.10e-12,43;CL:0000221,2.75e-12,44;CL:0000133,2.75e-12,44;CL:0000540,5.23e-12,33;CL:0000047,5.23e-12,33;CL:0000031,5.23e-12,33;CL:0000404,5.23e-12,33;CL:0000393,8.88e-11,39;CL:0000211,8.88e-11,39;CL:0002194,3.96e-09,4;CL:0000766,3.96e-09,4;CL:0000234,3.96e-09,4;CL:0000576,3.96e-09,4;CL:0000235,3.96e-09,4;CL:0000864,3.96e-09,4;CL:0002009,3.96e-09,4;CL:0000040,3.96e-09,4;CL:0000559,3.96e-09,4;CL:0002092,8.96e-08,3;CL:0002540,8.96e-08,3;CL:0000723,3.38e-07,91;CL:0000048,3.38e-07,91;CL:0002612,5.15e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.37e-17!75;UBERON:0001016!3.37e-17!75;UBERON:0001017!1.18e-16!73;UBERON:0005743!1.18e-16!73;UBERON:0004121!1.97e-15!102;UBERON:0000924!1.97e-15!102;UBERON:0006601!1.97e-15!102;UBERON:0002346!8.89e-13!71;UBERON:0003075!8.89e-13!71;UBERON:0007284!8.89e-13!71;UBERON:0002020!8.91e-12!34;UBERON:0001049!3.47e-11!52;UBERON:0005068!3.47e-11!52;UBERON:0006241!3.47e-11!52;UBERON:0007135!3.47e-11!52;UBERON:0000955!5.34e-10!50;UBERON:0006238!5.34e-10!50;UBERON:0002616!1.64e-09!49;UBERON:0000033!2.54e-09!63;UBERON:0002791!9.40e-09!29;UBERON:0003528!9.40e-09!29;UBERON:0001893!9.40e-09!29;UBERON:0003056!5.62e-08!49;UBERON:0003080!1.55e-07!40;UBERON:0002780!3.56e-07!39;UBERON:0001890!3.56e-07!39;UBERON:0006240!3.56e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.95e-25,73;UBERON:0001016,6.96e-24,75;UBERON:0000073,1.17e-17,54;UBERON:0004121,4.83e-17,95;UBERON:0000924,4.83e-17,95;UBERON:0006601,4.83e-17,95;UBERON:0002020,9.57e-16,34;UBERON:0001049,3.24e-15,52;UBERON:0005068,3.24e-15,52;UBERON:0006241,3.24e-15,52;UBERON:0007135,3.24e-15,52;UBERON:0002240,3.69e-12,6;UBERON:0005174,3.69e-12,6;UBERON:0001137,3.69e-12,6;UBERON:0002346,3.05e-11,64;UBERON:0003075,3.05e-11,64;UBERON:0007284,3.05e-11,64;UBERON:0001948,1.67e-10,5;UBERON:0002315,1.67e-10,5;UBERON:0003076,1.01e-09,12;UBERON:0003057,1.01e-09,12;UBERON:0000955,1.35e-09,47;UBERON:0006238,1.35e-09,47;UBERON:0003528,2.47e-09,29;UBERON:0002791,2.47e-09,29;UBERON:0001893,2.47e-09,29;UBERON:0010314,3.66e-09,92;UBERON:0010371,3.86e-09,73;UBERON:0002616,1.08e-08,46;UBERON:0002780,2.64e-08,39;UBERON:0001890,2.64e-08,39;UBERON:0006240,2.64e-08,39;UBERON:0003080,5.24e-08,40;UBERON:0002021,5.98e-08,10;UBERON:0000411,5.98e-08,10;UBERON:0001950,5.98e-08,10;UBERON:0002257,5.15e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.425216450755349,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0.439372365468944,0,0,2.87505128729943,0,0,0,1.02903774414379,0.573066879877513,0.515672092277442,1.61853168687678,3.70293685490423,0.633831403506179,0,0,5.39939830368839,6.92206453796882,9.2362414942993,3.89480143673926,4.61061966385865,0.933206510776299,1.62007125998029,0.841299845405528,3.42781181284564,1.76694832761291,0.857435594504678,0.958454710182364,0.919218786610021,4.40463523997555,1.91531007127782,1.38245879930619,4.3522474950964,4.11694396210843,0.52091337055676,1.3959149950069,0.56276261003168,0.916789486660861,3.53554302568401,2.98980529678116,2.23679334990361,0.681535739998656,0.377857800533928,0,0,0,0,0.649776417447669,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.890652834388949,1.21439728736295,1.21786191324856,0.230615497256059,0.452167921657868,1.41106448562846,0.251333182659351,0,0,0,0.485300549842228,0,0.484875253135222,0,0,1.67557365450764,0.255457055208591,0,0,0,0.898743836428936,0,1.13088916901578,1.04294592115366,0.255715457330331,1.45451631191692,1.1356888414743,0.305518091550949,0,0.252722758433675,0.631325567659422,0,0.459804208866946,0.540186389416048,0.452114453507145,0.544291993210623,0.2562274405697,0.468508622798644,0,0.215567992932842,0.189106080167819,0.527853372491847,1.09597866213787,0,0,0.205782136407943,0,0,0,0,0,0,0,0.473489471170421,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.210289948564127,1.74937841044784,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,4.31304619582064,0,0.312037673114561,0.252578877947112,0.538192240565737,1.4473305640901,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,3.01582567878545,2.71952841909355,0.491764273019036,0,1.76605648986571,0.468846746368813,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0.891194696329576,0.283076530788832,1.21443210502468,0.292255857911312,1.97643888973262,1.60660658210904,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.291480836629851,1.8542530201051,0.854354403989263,0.206386867963223,0,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.496375471371293,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,0.948033361884535,0.202725215290164,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0.375364950902364,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,1.89038500578056,1.37016503954128,2.2661816921691,0,1.35096360967266,1.35942722695261,0,0.31136204275253,0.798049746802062,0,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0,0.252697211763798,0.50695859978048,0.754505365544305,0.280924522409647,0.384150914429216,0.631790158511746,1.42888107384922,0.927074607558844,0.192909220463705,0,0.588795680537589,0.685738504770831,0.177475806159338,0.238436189947321,0.872078499793971,0.0941093804153306,0.338458431566706,0.914639864363863,0.526139422875686,0.407412341537585,0,0.118635018124174,0.591026894253381,0,0.464810523557898,0,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.425216450755349,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0.439372365468944,0,0,2.87505128729943,0,0,0,1.02903774414379,0.573066879877513,0.515672092277442,1.61853168687678,3.70293685490423,0.633831403506179,0,0,5.39939830368839,6.92206453796882,9.2362414942993,3.89480143673926,4.61061966385865,0.933206510776299,1.62007125998029,0.841299845405528,3.42781181284564,1.76694832761291,0.857435594504678,0.958454710182364,0.919218786610021,4.40463523997555,1.91531007127782,1.38245879930619,4.3522474950964,4.11694396210843,0.52091337055676,1.3959149950069,0.56276261003168,0.916789486660861,3.53554302568401,2.98980529678116,2.23679334990361,0.681535739998656,0.377857800533928,0,0,0,0,0.649776417447669,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.890652834388949,1.21439728736295,1.21786191324856,0.230615497256059,0.452167921657868,1.41106448562846,0.251333182659351,0,0,0,0.485300549842228,0,0.484875253135222,0,0,1.67557365450764,0.255457055208591,0,0,0,0.898743836428936,0,1.13088916901578,1.04294592115366,0.255715457330331,1.45451631191692,1.1356888414743,0.305518091550949,0,0.252722758433675,0.631325567659422,0,0.459804208866946,0.540186389416048,0.452114453507145,0.544291993210623,0.2562274405697,0.468508622798644,0,0.215567992932842,0.189106080167819,0.527853372491847,1.09597866213787,0,0,0.205782136407943,0,0,0,0,0,0,0,0.473489471170421,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.210289948564127,1.74937841044784,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,4.31304619582064,0,0.312037673114561,0.252578877947112,0.538192240565737,1.4473305640901,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,3.01582567878545,2.71952841909355,0.491764273019036,0,1.76605648986571,0.468846746368813,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0.891194696329576,0.283076530788832,1.21443210502468,0.292255857911312,1.97643888973262,1.60660658210904,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.291480836629851,1.8542530201051,0.854354403989263,0.206386867963223,0,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.496375471371293,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,0.948033361884535,0.202725215290164,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0.375364950902364,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,1.89038500578056,1.37016503954128,2.2661816921691,0,1.35096360967266,1.35942722695261,0,0.31136204275253,0.798049746802062,0,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0,0.252697211763798,0.50695859978048,0.754505365544305,0.280924522409647,0.384150914429216,0.631790158511746,1.42888107384922,0.927074607558844,0.192909220463705,0,0.588795680537589,0.685738504770831,0.177475806159338,0.238436189947321,0.872078499793971,0.0941093804153306,0.338458431566706,0.914639864363863,0.526139422875686,0.407412341537585,0,0.118635018124174,0.591026894253381,0,0.464810523557898,0,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p5@Sdc3
|short_description=p5@Sdc3
}}
}}

Latest revision as of 10:07, 26 September 2015

Short description:p5@Sdc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sdc3_5end
Coexpression cluster:MCL_coexpression_mm9:1801
Association with transcript: 0bp_to_ENSMUST00000146093_5end
EntrezGene:Sdc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sdc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system8.95e-2573
nervous system6.96e-2475
regional part of nervous system1.17e-1754
ectoderm-derived structure4.83e-1795
ectoderm4.83e-1795
presumptive ectoderm4.83e-1795
gray matter9.57e-1634
neural tube3.24e-1552
neural rod3.24e-1552
future spinal cord3.24e-1552
neural keel3.24e-1552
spinal cord3.69e-126
dorsal region element3.69e-126
dorsum3.69e-126
neurectoderm3.05e-1164
neural plate3.05e-1164
presumptive neural plate3.05e-1164
regional part of spinal cord1.67e-105
gray matter of spinal cord1.67e-105
posterior neural tube1.01e-0912
chordal neural plate1.01e-0912
brain1.35e-0947
future brain1.35e-0947
brain grey matter2.47e-0929
regional part of telencephalon2.47e-0929
telencephalon2.47e-0929
structure with developmental contribution from neural crest3.66e-0992
ecto-epithelium3.86e-0973
regional part of brain1.08e-0846
regional part of forebrain2.64e-0839
forebrain2.64e-0839
future forebrain2.64e-0839
anterior neural tube5.24e-0840
occipital lobe5.98e-0810
visual cortex5.98e-0810
neocortex5.98e-0810
ventral horn of spinal cord5.15e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:130348609..130348635,%2B&oldid=4247679"