FFCP PHASE1:Mm9::chr6:83085886..83085897,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20166 | |EntrezGene=20166 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C6B2 | |UniProt=Q8C6B2 | ||
|association_with_transcript=80bp_to_ENSMUST00000065512_5end | |association_with_transcript=80bp_to_ENSMUST00000065512_5end | ||
|cluster_id=chr6:83085886..83085897,+ | |||
|description=CAGE_peak_11_at_Rtkn_5end | |description=CAGE_peak_11_at_Rtkn_5end | ||
|id=chr6:83085886..83085897,+ | |id=chr6:83085886..83085897,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.41e-07!9;CL:0002251!9.41e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.77e-25,6;CL:0000677,9.77e-25,6;CL:0000584,9.77e-25,6;CL:0000075,3.27e-21,7;CL:0000682,5.18e-19,3;CL:0002563,1.68e-16,9;CL:0002251,1.68e-16,9;CL:0000066,1.29e-14,25;CL:0002076,7.01e-10,15;CL:0000473,1.83e-08,7;CL:0000223,2.21e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.53e-09!15;UBERON:0001242!8.85e-08!13;UBERON:0000060!8.85e-08!13;UBERON:0001262!8.85e-08!13;UBERON:0004786!8.85e-08!13;UBERON:0000485!1.80e-07!11;UBERON:0003350!9.41e-07!9;UBERON:0004808!9.41e-07!9;UBERON:0001277!9.41e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.90e-31,15;UBERON:0001242,1.36e-21,13;UBERON:0001262,1.36e-21,13;UBERON:0004786,1.36e-21,13;UBERON:0004923,5.69e-19,24;UBERON:0003350,1.68e-16,9;UBERON:0004808,1.68e-16,9;UBERON:0001277,1.68e-16,9;UBERON:0000485,1.69e-13,11;UBERON:0001962,4.84e-13,2;UBERON:0001961,4.84e-13,2;UBERON:0001744,4.84e-13,2;UBERON:0002465,5.41e-09,3;UBERON:0000160,9.95e-09,31;UBERON:0000331,1.45e-08,3;UBERON:0002116,1.45e-08,3;UBERON:0001204,1.45e-08,3;UBERON:0001168,1.45e-08,3;UBERON:0003199,2.11e-07,1 | |||
|phase1_expression=0.320297694209588,6.97950815278722,5.45999087267443,0.90739263392049,1.00179145989269,1.51091344720701,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.71987118748791,3.44113921600755,2.8711598205751,3.4460959692726,4.95583835177545,1.90023419456374,0.756090389279792,1.33038306393183,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0.648965052271031,0.509196819251581,0,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0.876782929710299,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0.465067889500816,0.268273401399619,0.350296027101508,0,0.164167464079095,0.324275238183423,0,0,0.268412837520744,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0,0.390267295715598,0.630540576424764,0.44292937929755,0.318909537314974,0.81931657357869,0,0.867894351489069,0,0,0,0,0,0.468846746368813,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,1.48397627647332,0.484393280087717,0.361877549568935,0.716234064018819,0.820704498725306,0.291480836629851,0,0,0,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.432021363287205,0.627264888043406,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0.388902376688095,0.387479470433193,0.337912250981556,0,0,0,0,0,0,0.810900861160657,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.729320151204882,0,0,0,0.206035057238894,0.64183841918363,0.505394423527595,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.952587382566147,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0,0.233931608445408,0,0.57386499620653,0,0 | |phase1_expression=0.320297694209588,6.97950815278722,5.45999087267443,0.90739263392049,1.00179145989269,1.51091344720701,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.71987118748791,3.44113921600755,2.8711598205751,3.4460959692726,4.95583835177545,1.90023419456374,0.756090389279792,1.33038306393183,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0.648965052271031,0.509196819251581,0,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0.876782929710299,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0.465067889500816,0.268273401399619,0.350296027101508,0,0.164167464079095,0.324275238183423,0,0,0.268412837520744,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0,0.390267295715598,0.630540576424764,0.44292937929755,0.318909537314974,0.81931657357869,0,0.867894351489069,0,0,0,0,0,0.468846746368813,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,1.48397627647332,0.484393280087717,0.361877549568935,0.716234064018819,0.820704498725306,0.291480836629851,0,0,0,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.432021363287205,0.627264888043406,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0.388902376688095,0.387479470433193,0.337912250981556,0,0,0,0,0,0,0.810900861160657,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.729320151204882,0,0,0,0.206035057238894,0.64183841918363,0.505394423527595,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.952587382566147,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0,0.233931608445408,0,0.57386499620653,0,0 | ||
|short_description=p11@Rtkn | |short_description=p11@Rtkn | ||
}} | }} |
Latest revision as of 18:56, 1 October 2015
Short description: | p11@Rtkn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Rtkn_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 80bp_to_ENSMUST00000065512_5end |
EntrezGene: | Rtkn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.77e-25 | 6 |
gut absorptive cell | 9.77e-25 | 6 |
enterocyte | 9.77e-25 | 6 |
columnar/cuboidal epithelial cell | 3.27e-21 | 7 |
M cell of gut | 5.18e-19 | 3 |
intestinal epithelial cell | 1.68e-16 | 9 |
epithelial cell of alimentary canal | 1.68e-16 | 9 |
epithelial cell | 1.29e-14 | 25 |
endo-epithelial cell | 7.01e-10 | 15 |
defensive cell | 1.83e-08 | 7 |
endodermal cell | 2.21e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.90e-31 | 15 |
intestinal mucosa | 1.36e-21 | 13 |
wall of intestine | 1.36e-21 | 13 |
gastrointestinal system mucosa | 1.36e-21 | 13 |
organ component layer | 5.69e-19 | 24 |
epithelium of mucosa | 1.68e-16 | 9 |
gastrointestinal system epithelium | 1.68e-16 | 9 |
intestinal epithelium | 1.68e-16 | 9 |
simple columnar epithelium | 1.69e-13 | 11 |
gut-associated lymphoid tissue | 4.84e-13 | 2 |
mucosa-associated lymphoid tissue | 4.84e-13 | 2 |
lymphoid tissue | 4.84e-13 | 2 |
lymphoid system | 5.41e-09 | 3 |
intestine | 9.95e-09 | 31 |
ileal mucosa | 1.45e-08 | 3 |
ileum | 1.45e-08 | 3 |
mucosa of small intestine | 1.45e-08 | 3 |
wall of small intestine | 1.45e-08 | 3 |
egg chamber | 2.11e-07 | 1 |