FFCP PHASE1:Mm9::chr7:148890247..148890260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:148890247..148890260,+ | |||
|description=CAGE_peak_at_chr7:148890247..148890260,+ | |description=CAGE_peak_at_chr7:148890247..148890260,+ | ||
|id=chr7:148890247..148890260,+ | |id=chr7:148890247..148890260,+ | ||
|ontology_enrichment_celltype=CL:0000239!9.91e-08!6;CL:0000677!9.91e-08!6;CL:0000212!9.91e-08!6;CL:0000584!9.91e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.96e-14,6;CL:0000677,3.96e-14,6;CL:0000584,3.96e-14,6;CL:0000075,4.99e-12,7;CL:0002563,3.17e-09,9;CL:0002251,3.17e-09,9;CL:0000682,6.43e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.14e-18!43;UBERON:0005409!4.08e-18!59;UBERON:0000344!5.07e-13!15;UBERON:0001242!1.08e-10!13;UBERON:0000060!1.08e-10!13;UBERON:0001262!1.08e-10!13;UBERON:0004786!1.08e-10!13;UBERON:0004923!1.13e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.69e-49,31;UBERON:0005409,2.41e-33,47;UBERON:0000344,1.97e-22,15;UBERON:0001242,8.53e-18,13;UBERON:0001262,8.53e-18,13;UBERON:0004786,8.53e-18,13;UBERON:0004923,4.47e-13,24;UBERON:0001007,2.11e-12,116;UBERON:0001555,2.11e-12,116;UBERON:0007026,2.11e-12,116;UBERON:0004119,4.34e-12,118;UBERON:0000925,4.34e-12,118;UBERON:0006595,4.34e-12,118;UBERON:0002108,2.68e-11,4;UBERON:0004921,2.27e-10,114;UBERON:0003350,3.17e-09,9;UBERON:0004808,3.17e-09,9;UBERON:0001277,3.17e-09,9;UBERON:0000331,9.35e-09,3;UBERON:0002116,9.35e-09,3;UBERON:0001204,9.35e-09,3;UBERON:0001168,9.35e-09,3;UBERON:0000485,1.94e-07,11;UBERON:0001155,7.15e-07,2;UBERON:0000059,7.15e-07,2 | |||
|phase1_expression=0,1.04692622291808,2.72999543633722,1.51232105653415,3.00537437967808,15.6127722878058,17.2873354040689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9189619226967,23.6291559499185,1.72269589234506,4.73838195774982,11.635446565038,72.7789696517912,11.8454160987167,17.0732493204585,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,2.96878087269556,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,76.4206220994301,0,0,55.6896380354729,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1642894130603,27.7673094996721,0.213288250535234,0,0,2.01683524623343,3.11329261382818,3.99473814836374,39.860441169739,22.3990578424655,17.8447998248191,12.9321706826748,16.7669114922443,79.9949273702257,192.579002438353,132.030664167645,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,43.7221254944776,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,52.2348342365925,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,1.22769312950907,0.154936841185966,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,1.04692622291808,2.72999543633722,1.51232105653415,3.00537437967808,15.6127722878058,17.2873354040689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9189619226967,23.6291559499185,1.72269589234506,4.73838195774982,11.635446565038,72.7789696517912,11.8454160987167,17.0732493204585,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,2.96878087269556,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,76.4206220994301,0,0,55.6896380354729,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1642894130603,27.7673094996721,0.213288250535234,0,0,2.01683524623343,3.11329261382818,3.99473814836374,39.860441169739,22.3990578424655,17.8447998248191,12.9321706826748,16.7669114922443,79.9949273702257,192.579002438353,132.030664167645,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,43.7221254944776,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,52.2348342365925,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,1.22769312950907,0.154936841185966,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr7:148890247..148890260,+ | |short_description=p@chr7:148890247..148890260,+ | ||
}} | }} |
Latest revision as of 13:19, 4 August 2015
Short description: | p@chr7:148890247..148890260, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148890247..148890260, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.96e-14 | 6 |
gut absorptive cell | 3.96e-14 | 6 |
enterocyte | 3.96e-14 | 6 |
columnar/cuboidal epithelial cell | 4.99e-12 | 7 |
intestinal epithelial cell | 3.17e-09 | 9 |
epithelial cell of alimentary canal | 3.17e-09 | 9 |
M cell of gut | 6.43e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.69e-49 | 31 |
gastrointestinal system | 2.41e-33 | 47 |
mucosa | 1.97e-22 | 15 |
intestinal mucosa | 8.53e-18 | 13 |
wall of intestine | 8.53e-18 | 13 |
gastrointestinal system mucosa | 8.53e-18 | 13 |
organ component layer | 4.47e-13 | 24 |
digestive system | 2.11e-12 | 116 |
digestive tract | 2.11e-12 | 116 |
primitive gut | 2.11e-12 | 116 |
endoderm-derived structure | 4.34e-12 | 118 |
endoderm | 4.34e-12 | 118 |
presumptive endoderm | 4.34e-12 | 118 |
small intestine | 2.68e-11 | 4 |
subdivision of digestive tract | 2.27e-10 | 114 |
epithelium of mucosa | 3.17e-09 | 9 |
gastrointestinal system epithelium | 3.17e-09 | 9 |
intestinal epithelium | 3.17e-09 | 9 |
ileal mucosa | 9.35e-09 | 3 |
ileum | 9.35e-09 | 3 |
mucosa of small intestine | 9.35e-09 | 3 |
wall of small intestine | 9.35e-09 | 3 |
simple columnar epithelium | 1.94e-07 | 11 |
colon | 7.15e-07 | 2 |
large intestine | 7.15e-07 | 2 |