FFCP PHASE1:Hg19::chr17:39769009..39769026,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.33e-20!254;CL:0002076!3.62e-14!43;CL:0000223!9.69e-10!59;CL:0002368!3.40e-08!13;CL:0002251!6.68e-08!21 | |ontology_enrichment_celltype=CL:0000066!1.33e-20!254;CL:0002076!3.62e-14!43;CL:0000223!9.69e-10!59;CL:0002368!3.40e-08!13;CL:0002251!6.68e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.88e-14;42!CL:0002368;2.46e-10;13!CL:0002251;2.72e-10;20!CL:0002159;1.41e-08;14!CL:0000622;1.92e-07;5 | |ontology_enrichment_celltype_v019=CL:0002076;1.88e-14;42!CL:0002368;2.46e-10;13!CL:0002251;2.72e-10;20!CL:0002159;1.41e-08;14!CL:0000622;1.92e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-20,253;CL:0002076,1.43e-19,42;CL:0000223,3.90e-13,58;CL:0002251,2.29e-10,20;CL:0002368,3.19e-10,13;CL:0002159,1.42e-08,14;CL:0000622,1.93e-07,5;CL:0002077,3.11e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;2.16e-07;58 | |ontology_enrichment_development_v019=CL:0000223;2.16e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!1.29e-08!14;DOID:305!4.53e-08!106 | |ontology_enrichment_disease=DOID:1749!1.29e-08!14;DOID:305!4.53e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.01e-10;14 | |ontology_enrichment_disease_v019=DOID:1749;2.01e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.90e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.75e-13!72;UBERON:0004119!2.70e-12!169;UBERON:0000925!2.70e-12!169;UBERON:0006595!2.70e-12!169;UBERON:0000065!1.33e-09!53;UBERON:0000077!1.26e-08!130;UBERON:0000072!3.50e-08!46;UBERON:0001007!3.61e-08!155;UBERON:0001555!3.61e-08!155;UBERON:0007026!3.61e-08!155;UBERON:0003102!8.06e-08!95;UBERON:0004923!3.27e-07!57;UBERON:0000161!8.69e-07!35;UBERON:0005631!9.19e-07!14;UBERON:0000158!9.19e-07!14 | |ontology_enrichment_uberon=UBERON:0001004!8.75e-13!72;UBERON:0004119!2.70e-12!169;UBERON:0000925!2.70e-12!169;UBERON:0006595!2.70e-12!169;UBERON:0000065!1.33e-09!53;UBERON:0000077!1.26e-08!130;UBERON:0000072!3.50e-08!46;UBERON:0001007!3.61e-08!155;UBERON:0001555!3.61e-08!155;UBERON:0007026!3.61e-08!155;UBERON:0003102!8.06e-08!95;UBERON:0004923!3.27e-07!57;UBERON:0000161!8.69e-07!35;UBERON:0005631!9.19e-07!14;UBERON:0000158!9.19e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.07e-09;12!UBERON:0000365;9.25e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000486;4.07e-09;12!UBERON:0000365;9.25e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.27e-14,74;UBERON:0004119,1.18e-11,160;UBERON:0000925,1.18e-11,160;UBERON:0006595,1.18e-11,160;UBERON:0000065,2.76e-10,54;UBERON:0001557,9.85e-09,19;UBERON:0000072,1.12e-08,47;UBERON:0005631,2.19e-08,14;UBERON:0000158,2.19e-08,14;UBERON:0004923,3.58e-08,66;UBERON:0000166,6.27e-08,22;UBERON:0003102,2.80e-07,99;UBERON:0000161,3.99e-07,36;UBERON:0001007,8.50e-07,145;UBERON:0001555,8.50e-07,145;UBERON:0007026,8.50e-07,145;UBERON:0000365,9.31e-07,5 | |||
|phase1_expression=0.181678379270557,13.4883330051319,0.704772020479856,1.0007329835313,3.5756887554183,0,12.6649939084155,0,1.82829939739887,0.245733936501509,5.58240934377942,16.3831029097629,13.979649846108,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,1.70297735647684,1037.10714121223,787.051065767568,963.209196484482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,1.2808035326455,1.18241114944293,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.598390972864896,3.83602275479425,0,0,0,0.251248665256743,0,1.08594422352558,19.9781835869012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,1.59331170856906,10.3387173116643,16.5455855902896,0,0,0.790513071238134,1.70272798147026,2432.7639352176,3717.85560779947,0,0.174129737299267,0.531831842075461,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,2941.01828764925,2.98183171017191,0.25326102332916,0.132409180813219,0,8.15737279056221,3.92474320099615,0,0,0,0,0,0,0,0,0,21.6779292186891,0,0,0.647491777472526,0.842704840213491,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0.717558542755448,0,0.211931901159562,0.600182192168805,0,1.28820270022815,0.18611685633159,1.35021065793013,0.584622030967192,0.252433774244115,0.0920498986422993,2.42469085228218,0.355009592516614,0,0.169560592310488,869.480578381672,502.398354128317,202.770848940026,0,0,0,0.310983165046111,0,0,0,0,0,0,0,1.0647612003586,1.34867752062481,1.92808823906786,1.98529150918309,1.96091499683166,2.84724742933316,2.42696354688296,1.96221465125346,4.61696588335668,0,0,0,0,0,0,0,0,1.35287282397425,0,3266.05874347529,2904.46130417689,524.761235988713,383.964282072422,0,0,0,0,0.117408694235822,0,0,0,5.53143078571493,5.15091697256924,0,0,0,481.791906692034,288.425314117442,421.497364101615,413.043906705536,483.033605810205,774.049629234561,0,0,3.10992173311158,6.91775776401415,1.8936365013957,4.00036734040665,0,0,23.9501424431787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,3.44585807502342,0,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,1.00034104211935,0,0.415941723061614,1.42743191037729,1.41932173530541,1.87426263988341,0.300946099727719,2.27407504055985,7.24311499047534,0.664225598535437,1.29058417979192,0.0868836144680828,0,0,0,0,0,1119.75324892248,99.8612637062982,287.875559249856,0.744323423456331,0.306923946576125,0.561320188866147,2.30650468660262,0,0.965123526861645,1.48418066444991,0,0,0,0,0,0,42.5073717042964,1729.37305320507,0,0,0.917870904715969,4.96319574198153,3.38867483259425,0,1.46139224653261,1.26661954671451,0,0,1.29549549661284,0,0,0,4.58777291481069,2.49322802678617,0.447749509444357,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0,0,0,594.939097364035,1455.48489087577,0,0.193341436584244,0,0,0,0,0,1.19317278382541,0,330.404545806595,83.7948693711863,132.079157431895,374.789578069812,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,10.5339989353915,0,0,0,0,0,5.69990615303693,6.91519275215794,0,0,452.051485584456,447.09161778237,385.474086409082,0.0941438007767792,103.321289441095,1179.30032967338,2155.95740649532,96.483828086923,0,0,0,0,0,0,0,0,0,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,13.1857361344705,0,0,0,270.258756723065,12.4725165949708,367.057039008582,0,0,0,0,5.91151142758382,10.5601433773067,0.276283915531148,0,0.818149460017238,0,0.311039587661807,1.07842021376792,3.58042349351218,0,3.35387579165574,0,0,0,0.0927680981618513,0,0.7812832832557,0.349839999984783,3.62499787717397,1.137934482855,1.01701460117107,7.56440581657396,0,0,0,0,0,0,0,0,1.09692698576986,0.544692317594951,1328.56885923081,250.934792980882,0.569710279235006,0,0,0,53.2731936752306,1.64875668123352,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,5.61804353109152,0,0,11.7398771359254,1.69946265673865,0.789168805698781,0,0,0.758238955541855,0.60129367765797,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0,1.94144542218394,1.04135843001079,69.7705869590369,26.7271764201836,0,0.171986032471617,0.967563312890852,0.730893170861856,0.656923656425674,486.399917689423,0,2.25980740780532,0,0,0,5.67099009930929,8.81747022766871,1.92107695265417,132.074151933788,0.144090417154106,0,0,0.864328787928898,0.124252535565433,47.1388069233591,0.543616824294456,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,9.44890344516302,113.748887320019,0.0607495566580247,1330.66940570629,0.0788057072991982,0.104909176269996,0.105600336519406,0,2.87872795979168,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0.704815022316672,0.4271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| ||
|short_description=p1@KRT16 | |short_description=p1@KRT16 | ||
}} | }} |
Revision as of 01:40, 20 November 2012
Short description: | p1@KRT16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRT16_5end |
Coexpression cluster: | C1778_tongue_Corneal_Urothelial_salivary_Esophageal_Sebocyte_Keratinocyte |
Association with transcript: | -4bp_to_ENST00000301653_5end |
EntrezGene: | KRT16 |
HGNC: | 6423 |
UniProt: | P08779 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.05e-20 | 253 |
endo-epithelial cell | 1.43e-19 | 42 |
endodermal cell | 3.90e-13 | 58 |
epithelial cell of alimentary canal | 2.29e-10 | 20 |
respiratory epithelial cell | 3.19e-10 | 13 |
general ecto-epithelial cell | 1.42e-08 | 14 |
acinar cell | 1.93e-07 | 5 |
ecto-epithelial cell | 3.11e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.27e-14 | 74 |
endoderm-derived structure | 1.18e-11 | 160 |
endoderm | 1.18e-11 | 160 |
presumptive endoderm | 1.18e-11 | 160 |
respiratory tract | 2.76e-10 | 54 |
upper respiratory tract | 9.85e-09 | 19 |
segment of respiratory tract | 1.12e-08 | 47 |
extraembryonic membrane | 2.19e-08 | 14 |
membranous layer | 2.19e-08 | 14 |
organ component layer | 3.58e-08 | 66 |
oral opening | 6.27e-08 | 22 |
surface structure | 2.80e-07 | 99 |
orifice | 3.99e-07 | 36 |
digestive system | 8.50e-07 | 145 |
digestive tract | 8.50e-07 | 145 |
primitive gut | 8.50e-07 | 145 |
urothelium | 9.31e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.90e-10 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.