Personal tools

FFCP PHASE1:Mm9::chr10:4795909..4795925,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr10:4795909..4795925,+
|id=chr10:4795909..4795925,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,5.44e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.70e-10!75;UBERON:0001016!1.70e-10!75;UBERON:0001049!2.59e-10!52;UBERON:0005068!2.59e-10!52;UBERON:0006241!2.59e-10!52;UBERON:0007135!2.59e-10!52;UBERON:0001017!3.50e-10!73;UBERON:0005743!3.50e-10!73;UBERON:0000955!5.18e-10!50;UBERON:0006238!5.18e-10!50;UBERON:0004121!6.80e-10!102;UBERON:0000924!6.80e-10!102;UBERON:0006601!6.80e-10!102;UBERON:0002346!1.16e-09!71;UBERON:0003075!1.16e-09!71;UBERON:0007284!1.16e-09!71;UBERON:0002616!2.09e-09!49;UBERON:0004111!2.88e-09!122;UBERON:0000033!4.60e-09!63;UBERON:0002020!4.94e-09!34;UBERON:0000025!5.67e-09!114;UBERON:0002021!1.52e-07!10;UBERON:0000411!1.52e-07!10;UBERON:0001950!1.52e-07!10;UBERON:0002791!7.08e-07!29;UBERON:0003528!7.08e-07!29;UBERON:0001893!7.08e-07!29
|ontology_enrichment_uberon=UBERON:0000073!1.70e-10!75;UBERON:0001016!1.70e-10!75;UBERON:0001049!2.59e-10!52;UBERON:0005068!2.59e-10!52;UBERON:0006241!2.59e-10!52;UBERON:0007135!2.59e-10!52;UBERON:0001017!3.50e-10!73;UBERON:0005743!3.50e-10!73;UBERON:0000955!5.18e-10!50;UBERON:0006238!5.18e-10!50;UBERON:0004121!6.80e-10!102;UBERON:0000924!6.80e-10!102;UBERON:0006601!6.80e-10!102;UBERON:0002346!1.16e-09!71;UBERON:0003075!1.16e-09!71;UBERON:0007284!1.16e-09!71;UBERON:0002616!2.09e-09!49;UBERON:0004111!2.88e-09!122;UBERON:0000033!4.60e-09!63;UBERON:0002020!4.94e-09!34;UBERON:0000025!5.67e-09!114;UBERON:0002021!1.52e-07!10;UBERON:0000411!1.52e-07!10;UBERON:0001950!1.52e-07!10;UBERON:0002791!7.08e-07!29;UBERON:0003528!7.08e-07!29;UBERON:0001893!7.08e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-24,54;UBERON:0001049,1.38e-21,52;UBERON:0005068,1.38e-21,52;UBERON:0006241,1.38e-21,52;UBERON:0007135,1.38e-21,52;UBERON:0001017,4.99e-19,73;UBERON:0002346,7.85e-19,64;UBERON:0003075,7.85e-19,64;UBERON:0007284,7.85e-19,64;UBERON:0001016,2.77e-18,75;UBERON:0000955,4.95e-18,47;UBERON:0006238,4.95e-18,47;UBERON:0002616,1.11e-16,46;UBERON:0002021,1.03e-15,10;UBERON:0000411,1.03e-15,10;UBERON:0001950,1.03e-15,10;UBERON:0010371,1.71e-15,73;UBERON:0002020,4.52e-15,34;UBERON:0004121,1.11e-14,95;UBERON:0000924,1.11e-14,95;UBERON:0006601,1.11e-14,95;UBERON:0010314,2.44e-13,92;UBERON:0003080,1.44e-12,40;UBERON:0003056,1.22e-11,49;UBERON:0003528,1.25e-11,29;UBERON:0002791,1.25e-11,29;UBERON:0001893,1.25e-11,29;UBERON:0002780,1.95e-11,39;UBERON:0001890,1.95e-11,39;UBERON:0006240,1.95e-11,39;UBERON:0000025,6.17e-11,114;UBERON:0003076,9.37e-11,12;UBERON:0003057,9.37e-11,12;UBERON:0002619,3.74e-10,17;UBERON:0004111,1.23e-09,122;UBERON:0000956,2.99e-09,21;UBERON:0001869,2.99e-09,21;UBERON:0000203,2.99e-09,21;UBERON:0000119,4.48e-08,176;UBERON:0002950,9.49e-08,4;UBERON:0001891,9.49e-08,4;UBERON:0009616,9.49e-08,4;UBERON:0010286,9.49e-08,4;UBERON:0000483,4.65e-07,174;UBERON:0004684,5.44e-07,3;UBERON:0002275,5.44e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,4.6880120671428,6.28228492768558,5.88231488031014,8.19654581950135,4.36959317728038,0.881277725829041,0.304130793658544,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0.633831403506179,1.69422266034566,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0,0,0,2.57085885963423,1.54607978666129,0.122490799214954,0.191690942036473,0,7.70811166995721,8.2996769755372,9.67721159514334,0.395658863190582,0.274462930807229,0.52091337055676,5.58365998002762,5.06486349028512,5.80633341551878,3.24091444021034,2.56269025438385,0.559198337475902,0.151452386666368,0.604572480854284,6.95674772884027,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0.258937883647172,1.03909497345377,0.173485326766136,0.304465478312141,0,0.150722640552623,0.705532242814229,0.251333182659351,0,0.578397427679647,0.884610551949874,0.161766849947409,0.441683036920787,0,0,41.5748731756397,28.2753054198164,0,0.11981512450592,0,0,6.5907881338122,5.49000723382352,0.251308704225729,2.78118912307642,6.13717097592793,6.64921742590592,4.70499662896497,0,0.746441823660558,0,1.68353484709179,0,0,0,0,0.204109497453984,0.2562274405697,0.374806898238915,4.9153640440413,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.891756905004413,1.31579988682799,1.3173006917463,0.536825675041487,4.6263788684108,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0.196558995113203,0,0,0.482354319504834,0.50925170356284,0.863088412352432,0,0,0,0,0,0,0.179397413521912,0,3.51031061316549,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,1.80249646187312,2.07221978239075,3.47157740595628,0,0,0,0,7.22477654945064,7.501547941901,0,0.252470927204373,0,0.390438744296638,0,0,0,0.283076530788832,0,0.584511715822624,0,17.6726724031994,0.567760340833074,0,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,6.48988557036784,0.341741761595705,0,0.370389054739423,0.376736914009382,0,0,0,0.419854356970974,0.276399947608848,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.629156066554265,1.20792060413003,0.576060012515731,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.906921534460845,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0.214368379079066,0,4.51801474093653,1.84130094602871,4.58316410751517,4.46818274093588,4.7955776383945,5.2877572817279,2.70009000092722,6.30449684513909,5.89085131679466,6.73088405277366,0,0,0.170733605754134,0,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,4.6880120671428,6.28228492768558,5.88231488031014,8.19654581950135,4.36959317728038,0.881277725829041,0.304130793658544,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0.633831403506179,1.69422266034566,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0,0,0,2.57085885963423,1.54607978666129,0.122490799214954,0.191690942036473,0,7.70811166995721,8.2996769755372,9.67721159514334,0.395658863190582,0.274462930807229,0.52091337055676,5.58365998002762,5.06486349028512,5.80633341551878,3.24091444021034,2.56269025438385,0.559198337475902,0.151452386666368,0.604572480854284,6.95674772884027,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0.258937883647172,1.03909497345377,0.173485326766136,0.304465478312141,0,0.150722640552623,0.705532242814229,0.251333182659351,0,0.578397427679647,0.884610551949874,0.161766849947409,0.441683036920787,0,0,41.5748731756397,28.2753054198164,0,0.11981512450592,0,0,6.5907881338122,5.49000723382352,0.251308704225729,2.78118912307642,6.13717097592793,6.64921742590592,4.70499662896497,0,0.746441823660558,0,1.68353484709179,0,0,0,0,0.204109497453984,0.2562274405697,0.374806898238915,4.9153640440413,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.891756905004413,1.31579988682799,1.3173006917463,0.536825675041487,4.6263788684108,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0.196558995113203,0,0,0.482354319504834,0.50925170356284,0.863088412352432,0,0,0,0,0,0,0.179397413521912,0,3.51031061316549,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,1.80249646187312,2.07221978239075,3.47157740595628,0,0,0,0,7.22477654945064,7.501547941901,0,0.252470927204373,0,0.390438744296638,0,0,0,0.283076530788832,0,0.584511715822624,0,17.6726724031994,0.567760340833074,0,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,6.48988557036784,0.341741761595705,0,0.370389054739423,0.376736914009382,0,0,0,0.419854356970974,0.276399947608848,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.629156066554265,1.20792060413003,0.576060012515731,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.906921534460845,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0.214368379079066,0,4.51801474093653,1.84130094602871,4.58316410751517,4.46818274093588,4.7955776383945,5.2877572817279,2.70009000092722,6.30449684513909,5.89085131679466,6.73088405277366,0,0,0.170733605754134,0,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0.441182838239031,0
|short_description=p7@Syne1
|short_description=p7@Syne1
}}
}}

Revision as of 22:04, 14 November 2012

Short description:p7@Syne1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Syne1_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 60bp_to_ENSMUST00000041639, NM_153399, uc007egn.1_5end
EntrezGene:Syne1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Syne1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B241.57
cerebellum, neonate N30.CNhs11135.1395-42I228.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron5.44e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.44e-2454
neural tube1.38e-2152
neural rod1.38e-2152
future spinal cord1.38e-2152
neural keel1.38e-2152
central nervous system4.99e-1973
neurectoderm7.85e-1964
neural plate7.85e-1964
presumptive neural plate7.85e-1964
nervous system2.77e-1875
brain4.95e-1847
future brain4.95e-1847
regional part of brain1.11e-1646
occipital lobe1.03e-1510
visual cortex1.03e-1510
neocortex1.03e-1510
ecto-epithelium1.71e-1573
gray matter4.52e-1534
ectoderm-derived structure1.11e-1495
ectoderm1.11e-1495
presumptive ectoderm1.11e-1495
structure with developmental contribution from neural crest2.44e-1392
anterior neural tube1.44e-1240
pre-chordal neural plate1.22e-1149
brain grey matter1.25e-1129
regional part of telencephalon1.25e-1129
telencephalon1.25e-1129
regional part of forebrain1.95e-1139
forebrain1.95e-1139
future forebrain1.95e-1139
tube6.17e-11114
posterior neural tube9.37e-1112
chordal neural plate9.37e-1112
regional part of cerebral cortex3.74e-1017
anatomical conduit1.23e-09122
cerebral cortex2.99e-0921
cerebral hemisphere2.99e-0921
pallium2.99e-0921
cell layer4.48e-08176
regional part of midbrain9.49e-084
midbrain9.49e-084
presumptive midbrain9.49e-084
midbrain neural tube9.49e-084
epithelium4.65e-07174
raphe nuclei5.44e-073
reticular formation5.44e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:4795909..4795925,%2B&oldid=2344546"