FFCP PHASE1:Mm9::chr10:127325744..127325806,-: Difference between revisions
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|id=chr10:127325744..127325806,- | |id=chr10:127325744..127325806,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.40e-08,25;CL:0002563,4.70e-08,9;CL:0002251,4.70e-08,9;CL:0000223,1.76e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.80e-14!22;UBERON:0007499!7.80e-14!22;UBERON:0006925!7.80e-14!22;UBERON:0009497!7.80e-14!22;UBERON:0000015!7.80e-14!22;UBERON:0002423!7.80e-14!22;UBERON:0006235!7.80e-14!22;UBERON:0008835!7.80e-14!22;UBERON:0003894!7.80e-14!22;UBERON:0004161!7.80e-14!22;UBERON:0008836!7.80e-14!22;UBERON:0009854!8.40e-13!23;UBERON:0009856!8.40e-13!23;UBERON:0001007!2.40e-11!128;UBERON:0001555!2.40e-11!128;UBERON:0007026!2.40e-11!128;UBERON:0002365!5.20e-11!25;UBERON:0002330!5.20e-11!25;UBERON:0005172!6.20e-11!49;UBERON:0005173!6.20e-11!49;UBERON:0002417!6.20e-11!49;UBERON:0000916!6.20e-11!49;UBERON:0004119!8.81e-11!130;UBERON:0000925!8.81e-11!130;UBERON:0006595!8.81e-11!130;UBERON:0005409!1.38e-10!59;UBERON:0004921!2.13e-10!126;UBERON:0004185!2.13e-10!126;UBERON:0000344!7.53e-10!15;UBERON:0000160!4.33e-09!43;UBERON:0001242!1.52e-08!13;UBERON:0000060!1.52e-08!13;UBERON:0001262!1.52e-08!13;UBERON:0004786!1.52e-08!13;UBERON:0003929!5.50e-08!55;UBERON:0004923!5.17e-07!24;UBERON:0009569!7.70e-07!66 | |ontology_enrichment_uberon=UBERON:0002107!7.80e-14!22;UBERON:0007499!7.80e-14!22;UBERON:0006925!7.80e-14!22;UBERON:0009497!7.80e-14!22;UBERON:0000015!7.80e-14!22;UBERON:0002423!7.80e-14!22;UBERON:0006235!7.80e-14!22;UBERON:0008835!7.80e-14!22;UBERON:0003894!7.80e-14!22;UBERON:0004161!7.80e-14!22;UBERON:0008836!7.80e-14!22;UBERON:0009854!8.40e-13!23;UBERON:0009856!8.40e-13!23;UBERON:0001007!2.40e-11!128;UBERON:0001555!2.40e-11!128;UBERON:0007026!2.40e-11!128;UBERON:0002365!5.20e-11!25;UBERON:0002330!5.20e-11!25;UBERON:0005172!6.20e-11!49;UBERON:0005173!6.20e-11!49;UBERON:0002417!6.20e-11!49;UBERON:0000916!6.20e-11!49;UBERON:0004119!8.81e-11!130;UBERON:0000925!8.81e-11!130;UBERON:0006595!8.81e-11!130;UBERON:0005409!1.38e-10!59;UBERON:0004921!2.13e-10!126;UBERON:0004185!2.13e-10!126;UBERON:0000344!7.53e-10!15;UBERON:0000160!4.33e-09!43;UBERON:0001242!1.52e-08!13;UBERON:0000060!1.52e-08!13;UBERON:0001262!1.52e-08!13;UBERON:0004786!1.52e-08!13;UBERON:0003929!5.50e-08!55;UBERON:0004923!5.17e-07!24;UBERON:0009569!7.70e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.20e-16,22;UBERON:0007499,7.20e-16,22;UBERON:0006925,7.20e-16,22;UBERON:0009497,7.20e-16,22;UBERON:0000015,7.20e-16,22;UBERON:0002423,7.20e-16,22;UBERON:0006235,7.20e-16,22;UBERON:0008835,7.20e-16,22;UBERON:0003894,7.20e-16,22;UBERON:0004161,7.20e-16,22;UBERON:0008836,7.20e-16,22;UBERON:0009854,7.33e-15,23;UBERON:0009856,7.33e-15,23;UBERON:0000160,1.91e-13,31;UBERON:0002365,4.26e-13,25;UBERON:0002330,4.26e-13,25;UBERON:0000344,2.04e-12,15;UBERON:0001242,1.04e-10,13;UBERON:0001262,1.04e-10,13;UBERON:0004786,1.04e-10,13;UBERON:0005409,1.43e-10,47;UBERON:0001007,3.04e-10,116;UBERON:0001555,3.04e-10,116;UBERON:0007026,3.04e-10,116;UBERON:0004119,8.29e-10,118;UBERON:0000925,8.29e-10,118;UBERON:0006595,8.29e-10,118;UBERON:0004921,3.40e-09,114;UBERON:0003929,1.55e-08,55;UBERON:0003350,4.70e-08,9;UBERON:0004808,4.70e-08,9;UBERON:0001277,4.70e-08,9;UBERON:0005256,2.06e-07,45 | |||
|phase1_expression=0,97.0151633237424,105.104824298983,128.84975401671,147.764240334172,24.342494427224,18.9226238882376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,79.0362568599429,89.4696196161963,123.459872284729,117.598024951427,78.4315286976636,35.1543325994292,44.8613630972677,3.54768817048488,0,0,0,9.82095507154334,23.6053196409059,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,3.76823835312181,971.418557111985,757.488065750434,1490.12051211201,1461.99693925726,1038.52632429162,318.668389278945,0,0,0,0,0,0,0,0,0,0,468.724826246741,0,3.41416919849097,0,0.608930956624282,5.30415643688935,8.74191315205211,7.05532242814229,5.52933001850572,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,60.2878650292276,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,1.65775299619287,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0,0,99.4560536781232,79.0707194323997,0,0,0,0.605050573870028,0.22237804384487,2.47293313946327,64.5359523700536,4.77626968699632,10.304743560811,10.544693018181,14.4273424468149,64.714997423104,108.285162987222,145.572270748942,0,0,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,1351.8239795174,0,0.196558995113203,0.224862112384854,4.05720242777006,21.2235900582127,105.669728489289,234.760048159861,278.548319599511,604.858793253343,626.829380459266,702.602109198134,831.268361177189,843.108294587459,917.976564991625,1113.47964730665,0,0,0,0,0,0,1.90434912708811,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,2.02405350837447,0,0,0,0,5.34196811001766,0.162886959353576,0,0,0,0,0,0.295301892880773,0.614870295887855,1.80899805217755,0.727067458955011,3.92147116223193,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.119372344003136,0,65.2917074050866,0,0,0,0.185194527369712,0.753473828018764,0.136694227721025,0.686334519619568,0,0,0,18.1387417422872,0,0,0.324016022465404,0.627264888043406,4.80397640241591,19.9599232649535,64.717655832938,26.9608620243551,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,9.76532886329626,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,2.5738091183002,15.3350242183115,16.2767695218726,13.7995260124481,12.6348605881899,15.4622372933046,13.5810965797975,13.9525846130125,13.3812568526177,12.6932386391905,14.7651044297753,12.1678542242098,11.3816440073586,10.714233420886,14.7198920134397,20.9150243955103,15.9728225543404,14.7830437767339,14.5346416632329,13.8340789210536,13.5383372626682,14.2683818840763,13.6796249947678,15.2100607507365,11.2228454331548,12.5753119211625,13.4951140854522,11.4584692087513,13.479505183179,10.6098636039628,0,22.6913660192046,35.0239818098726,0,5.29419405886837,2.31867835620421 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|phase1_expression=0,97.0151633237424,105.104824298983,128.84975401671,147.764240334172,24.342494427224,18.9226238882376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,79.0362568599429,89.4696196161963,123.459872284729,117.598024951427,78.4315286976636,35.1543325994292,44.8613630972677,3.54768817048488,0,0,0,9.82095507154334,23.6053196409059,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,3.76823835312181,971.418557111985,757.488065750434,1490.12051211201,1461.99693925726,1038.52632429162,318.668389278945,0,0,0,0,0,0,0,0,0,0,468.724826246741,0,3.41416919849097,0,0.608930956624282,5.30415643688935,8.74191315205211,7.05532242814229,5.52933001850572,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,60.2878650292276,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,1.65775299619287,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0,0,99.4560536781232,79.0707194323997,0,0,0,0.605050573870028,0.22237804384487,2.47293313946327,64.5359523700536,4.77626968699632,10.304743560811,10.544693018181,14.4273424468149,64.714997423104,108.285162987222,145.572270748942,0,0,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,1351.8239795174,0,0.196558995113203,0.224862112384854,4.05720242777006,21.2235900582127,105.669728489289,234.760048159861,278.548319599511,604.858793253343,626.829380459266,702.602109198134,831.268361177189,843.108294587459,917.976564991625,1113.47964730665,0,0,0,0,0,0,1.90434912708811,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,2.02405350837447,0,0,0,0,5.34196811001766,0.162886959353576,0,0,0,0,0,0.295301892880773,0.614870295887855,1.80899805217755,0.727067458955011,3.92147116223193,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.119372344003136,0,65.2917074050866,0,0,0,0.185194527369712,0.753473828018764,0.136694227721025,0.686334519619568,0,0,0,18.1387417422872,0,0,0.324016022465404,0.627264888043406,4.80397640241591,19.9599232649535,64.717655832938,26.9608620243551,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,9.76532886329626,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,2.5738091183002,15.3350242183115,16.2767695218726,13.7995260124481,12.6348605881899,15.4622372933046,13.5810965797975,13.9525846130125,13.3812568526177,12.6932386391905,14.7651044297753,12.1678542242098,11.3816440073586,10.714233420886,14.7198920134397,20.9150243955103,15.9728225543404,14.7830437767339,14.5346416632329,13.8340789210536,13.5383372626682,14.2683818840763,13.6796249947678,15.2100607507365,11.2228454331548,12.5753119211625,13.4951140854522,11.4584692087513,13.479505183179,10.6098636039628,0,22.6913660192046,35.0239818098726,0,5.29419405886837,2.31867835620421 | ||
|short_description=p1@Rdh7 | |short_description=p1@Rdh7 | ||
}} | }} |
Revision as of 19:15, 13 November 2012
Short description: | p1@Rdh7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rdh7_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_NM_001150749, NM_017473, uc007hkv.2_5end |
EntrezGene: | Rdh7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.40e-08 | 25 |
intestinal epithelial cell | 4.70e-08 | 9 |
epithelial cell of alimentary canal | 4.70e-08 | 9 |
endodermal cell | 1.76e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 7.20e-16 | 22 |
epithelial sac | 7.20e-16 | 22 |
digestive gland | 7.20e-16 | 22 |
epithelium of foregut-midgut junction | 7.20e-16 | 22 |
anatomical boundary | 7.20e-16 | 22 |
hepatobiliary system | 7.20e-16 | 22 |
foregut-midgut junction | 7.20e-16 | 22 |
hepatic diverticulum | 7.20e-16 | 22 |
liver primordium | 7.20e-16 | 22 |
septum transversum | 7.20e-16 | 22 |
liver bud | 7.20e-16 | 22 |
digestive tract diverticulum | 7.33e-15 | 23 |
sac | 7.33e-15 | 23 |
intestine | 1.91e-13 | 31 |
exocrine gland | 4.26e-13 | 25 |
exocrine system | 4.26e-13 | 25 |
mucosa | 2.04e-12 | 15 |
intestinal mucosa | 1.04e-10 | 13 |
wall of intestine | 1.04e-10 | 13 |
gastrointestinal system mucosa | 1.04e-10 | 13 |
gastrointestinal system | 1.43e-10 | 47 |
digestive system | 3.04e-10 | 116 |
digestive tract | 3.04e-10 | 116 |
primitive gut | 3.04e-10 | 116 |
endoderm-derived structure | 8.29e-10 | 118 |
endoderm | 8.29e-10 | 118 |
presumptive endoderm | 8.29e-10 | 118 |
subdivision of digestive tract | 3.40e-09 | 114 |
gut epithelium | 1.55e-08 | 55 |
epithelium of mucosa | 4.70e-08 | 9 |
gastrointestinal system epithelium | 4.70e-08 | 9 |
intestinal epithelium | 4.70e-08 | 9 |
trunk mesenchyme | 2.06e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.