FFCP PHASE1:Mm9::chr3:95462693..95462709,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17210|HGNC=|MCL_coexpression_id=586|UniProt=P97287|association_with_transcript=50bp_to_ENSMUST00000037947,NM_008562,uc008qkl.1_5end|description=CAGE_peak_1_at_Mcl1_5end|id=chr3:95462693..95462709,+|ontology_enrichment_celltype=CL:0000063!1.79e-12!66;CL:0000219!5.60e-12!54;CL:0000988!1.49e-11!32;CL:0002032!1.49e-11!32;CL:0000037!1.49e-11!32;CL:0000566!1.49e-11!32;CL:0000837!1.49e-11!32;CL:0002320!1.11e-10!46;CL:0000134!1.11e-10!46;CL:0002031!4.34e-09!25;CL:0000049!1.05e-07!19|ontology_enrichment_celltype_v019_2=CL:0000219,5.60e-12,54;CL:0000988,1.49e-11,32;CL:0002032,1.49e-11,32;CL:0000037,1.49e-11,32;CL:0000837,1.49e-11,32;CL:0002320,1.11e-10,46;CL:0000134,1.11e-10,46;CL:0002031,4.34e-09,25;CL:0000049,1.05e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.11e-10!46;UBERON:0004119!2.17e-10!130;UBERON:0000925!2.17e-10!130;UBERON:0006595!2.17e-10!130;UBERON:0000926!2.47e-10!193;UBERON:0004120!2.47e-10!193;UBERON:0006603!2.47e-10!193;UBERON:0001007!3.80e-10!128;UBERON:0001555!3.80e-10!128;UBERON:0007026!3.80e-10!128;UBERON:0002204!6.08e-10!32;UBERON:0004921!1.83e-09!126;UBERON:0004185!1.83e-09!126;UBERON:0002193!5.46e-08!48;UBERON:0003081!9.80e-08!88;UBERON:0002371!1.08e-07!16;UBERON:0002405!1.12e-07!70;UBERON:0001474!1.18e-07!22;UBERON:0004765!1.18e-07!22;UBERON:0001434!1.18e-07!22;UBERON:0003104!1.18e-07!131;UBERON:0009142!1.18e-07!131;UBERON:0002390!1.67e-07!45;UBERON:0003061!1.67e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.11e-10,46;UBERON:0002204,6.08e-10,32;UBERON:0004119,9.58e-10,118;UBERON:0000925,9.58e-10,118;UBERON:0006595,9.58e-10,118;UBERON:0001007,1.62e-09,116;UBERON:0001555,1.62e-09,116;UBERON:0007026,1.62e-09,116;UBERON:0004921,7.51e-09,114;UBERON:0002193,5.46e-08,48;UBERON:0002405,5.46e-08,48;UBERON:0003081,7.08e-08,87;UBERON:0002371,1.08e-07,16;UBERON:0001474,1.18e-07,22;UBERON:0004765,1.18e-07,22;UBERON:0001434,1.18e-07,22;UBERON:0002390,1.67e-07,45;UBERON:0003061,1.67e-07,45;UBERON:0000926,8.53e-07,120;UBERON:0004120,8.53e-07,120;UBERON:0006603,8.53e-07,120|phase1_expression=164.312717129519,503.222537815959,634.723938948403,496.948699177122,682.720879916871,274.314730304028,245.293272625302,769.704131035236,785.741858328452,830.460939390433,268.640992145817,285.903417839286,515.314197092929,534.138658780074,196.201649709425,240.945568193893,162.29835572573,688.653906977033,644.026494646155,574.199198882735,94.0578789070832,121.929288074687,113.883108064576,264.307482454708,334.937550358068,530.590334842279,525.96039731023,357.682246258576,373.205995812318,315.289692329673,331.708843940336,154.31245365069,191.285148938801,126.785344812351,110.919021984489,105.558999802643,113.72233143814,1315.02638377536,1105.58951250118,793.138472120304,1978.81072573633,1628.38043614093,1038.02113478061,143.018785220256,145.577273231223,132.704301812896,147.089572737431,178.998653388347,204.747522308528,231.177149999323,193.601221107876,207.003692685559,643.614076837477,834.166463313046,594.886024482161,212.753553601728,173.352731162948,203.174804357312,78.4987868135239,81.9936017871651,101.413024560989,156.885018348008,193.866265552228,446.350259771574,358.958489611812,412.078466668738,220.206081231027,158.29794179248,86.7882055021958,84.7837292723017,90.6500583424456,55.7019419587417,51.462370041726,78.1491298991407,78.9766681190268,86.406565941342,39.6417171597799,42.9029455966231,42.241796645467,86.1217458878166,77.3985464876386,71.3651317662761,43.8317308432168,47.8348218526928,42.4779128819532,51.8546310433655,51.2538050876771,64.6806077013793,183.181661672972,147.440113768339,541.466864894734,197.037067828737,563.016264310017,101.46420002791,96.8166861997027,107.526452903361,155.191084245586,80.6135425794213,90.6653156064012,99.6417600119159,116.195821315761,101.377917157311,53.5091003383956,35.5533351576666,221.253843913461,203.447971976504,212.825791351224,135.9930007454,111.343289968284,185.404231691966,108.601814555601,179.634632204163,202.480406590819,221.562281612355,178.382068724864,170.52956443437,300.341885797264,146.91294663063,199.037374188722,147.531367152037,202.732513946641,179.888718913167,255.356712868827,50.9438586800092,42.5176814831314,244.727858889831,711.821654689672,723.48269357805,561.523333435873,44.4878199032323,64.5075849974263,76.1465373803958,47.1063907721069,47.8187905207718,46.1289458922223,54.6753056538343,133.613245371615,176.160270383892,73.2895999457657,73.4442077043794,81.7156381805779,95.8691775487582,84.0890146190981,78.0650956389004,92.9378578407138,75.7152086883462,91.1717779966161,93.6506202075237,99.3768447420403,97.2005252062591,86.040099716171,112.666606467773,100.097009721215,128.156797280157,126.967578163701,82.2011521960377,573.708174034913,472.748105369732,397.82889915383,118.061690345236,101.549783971815,92.7319616524227,116.004920436753,101.333579349913,105.210170989192,118.127243933207,146.209003762792,205.623767908585,152.053301320056,179.763373166609,263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| ||
|EntrezGene=17210 | |||
|HGNC= | |||
|MCL_coexpression_id=586 | |||
|UniProt=P97287 | |||
|association_with_transcript=50bp_to_ENSMUST00000037947,NM_008562,uc008qkl.1_5end | |||
|description=CAGE_peak_1_at_Mcl1_5end | |||
|id=chr3:95462693..95462709,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.79e-12!66;CL:0000219!5.60e-12!54;CL:0000988!1.49e-11!32;CL:0002032!1.49e-11!32;CL:0000037!1.49e-11!32;CL:0000566!1.49e-11!32;CL:0000837!1.49e-11!32;CL:0002320!1.11e-10!46;CL:0000134!1.11e-10!46;CL:0002031!4.34e-09!25;CL:0000049!1.05e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.60e-12,54;CL:0000988,1.49e-11,32;CL:0002032,1.49e-11,32;CL:0000037,1.49e-11,32;CL:0000837,1.49e-11,32;CL:0002320,1.11e-10,46;CL:0000134,1.11e-10,46;CL:0002031,4.34e-09,25;CL:0000049,1.05e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.11e-10!46;UBERON:0004119!2.17e-10!130;UBERON:0000925!2.17e-10!130;UBERON:0006595!2.17e-10!130;UBERON:0000926!2.47e-10!193;UBERON:0004120!2.47e-10!193;UBERON:0006603!2.47e-10!193;UBERON:0001007!3.80e-10!128;UBERON:0001555!3.80e-10!128;UBERON:0007026!3.80e-10!128;UBERON:0002204!6.08e-10!32;UBERON:0004921!1.83e-09!126;UBERON:0004185!1.83e-09!126;UBERON:0002193!5.46e-08!48;UBERON:0003081!9.80e-08!88;UBERON:0002371!1.08e-07!16;UBERON:0002405!1.12e-07!70;UBERON:0001474!1.18e-07!22;UBERON:0004765!1.18e-07!22;UBERON:0001434!1.18e-07!22;UBERON:0003104!1.18e-07!131;UBERON:0009142!1.18e-07!131;UBERON:0002390!1.67e-07!45;UBERON:0003061!1.67e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.11e-10,46;UBERON:0002204,6.08e-10,32;UBERON:0004119,9.58e-10,118;UBERON:0000925,9.58e-10,118;UBERON:0006595,9.58e-10,118;UBERON:0001007,1.62e-09,116;UBERON:0001555,1.62e-09,116;UBERON:0007026,1.62e-09,116;UBERON:0004921,7.51e-09,114;UBERON:0002193,5.46e-08,48;UBERON:0002405,5.46e-08,48;UBERON:0003081,7.08e-08,87;UBERON:0002371,1.08e-07,16;UBERON:0001474,1.18e-07,22;UBERON:0004765,1.18e-07,22;UBERON:0001434,1.18e-07,22;UBERON:0002390,1.67e-07,45;UBERON:0003061,1.67e-07,45;UBERON:0000926,8.53e-07,120;UBERON:0004120,8.53e-07,120;UBERON:0006603,8.53e-07,120 | |||
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| |||
|short_description=p1@Mcl1 | |||
}} |
Revision as of 03:05, 14 September 2013
Short description: | p1@Mcl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mcl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:586 |
Association with transcript: | 50bp_to_ENSMUST00000037947, NM_008562, uc008qkl.1_5end |
EntrezGene: | Mcl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.60e-12 | 54 |
hematopoietic cell | 1.49e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.49e-11 | 32 |
hematopoietic stem cell | 1.49e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.49e-11 | 32 |
connective tissue cell | 1.11e-10 | 46 |
mesenchymal cell | 1.11e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 4.34e-09 | 25 |
common myeloid progenitor | 1.05e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.11e-10 | 46 |
musculoskeletal system | 6.08e-10 | 32 |
endoderm-derived structure | 9.58e-10 | 118 |
endoderm | 9.58e-10 | 118 |
presumptive endoderm | 9.58e-10 | 118 |
digestive system | 1.62e-09 | 116 |
digestive tract | 1.62e-09 | 116 |
primitive gut | 1.62e-09 | 116 |
subdivision of digestive tract | 7.51e-09 | 114 |
hemolymphoid system | 5.46e-08 | 48 |
immune system | 5.46e-08 | 48 |
lateral plate mesoderm | 7.08e-08 | 87 |
bone marrow | 1.08e-07 | 16 |
bone element | 1.18e-07 | 22 |
skeletal element | 1.18e-07 | 22 |
skeletal system | 1.18e-07 | 22 |
hematopoietic system | 1.67e-07 | 45 |
blood island | 1.67e-07 | 45 |
mesoderm | 8.53e-07 | 120 |
mesoderm-derived structure | 8.53e-07 | 120 |
presumptive mesoderm | 8.53e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.