FFCP PHASE1:Mm9::chr5:145497411..145497422,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=159|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:145497411..145497422,-|id=chr5:145497411..145497422,-|ontology_enrichment_celltype=CL:0000117!4.61e-28!23;CL:0000337!4.61e-28!23;CL:0000540!3.04e-21!33;CL:0000047!3.04e-21!33;CL:0000031!3.04e-21!33;CL:0000404!3.04e-21!33;CL:0000393!6.59e-17!39;CL:0000211!6.59e-17!39;CL:0002319!1.06e-14!43;CL:0000221!3.25e-14!44;CL:0000133!3.25e-14!44;CL:0000055!1.03e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-38,23;CL:0000337,1.85e-38,23;CL:0000540,3.46e-26,33;CL:0000047,3.46e-26,33;CL:0000031,3.46e-26,33;CL:0000404,3.46e-26,33;CL:0000393,7.77e-22,39;CL:0000211,7.77e-22,39;CL:0002319,1.32e-19,43;CL:0000221,4.10e-19,44;CL:0000133,4.10e-19,44;CL:0002610,1.23e-15,3;CL:0002612,4.13e-15,3;CL:0002614,4.61e-15,3;CL:0002321,3.37e-11,70;CL:0000723,4.32e-08,91;CL:0000048,4.32e-08,91;CL:0000034,1.90e-07,97;CL:0002613,4.17e-07,3;CL:0000120,5.15e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.68e-41!73;UBERON:0005743!8.68e-41!73;UBERON:0001049!4.25e-40!52;UBERON:0005068!4.25e-40!52;UBERON:0006241!4.25e-40!52;UBERON:0007135!4.25e-40!52;UBERON:0000073!2.34e-39!75;UBERON:0001016!2.34e-39!75;UBERON:0002616!5.04e-36!49;UBERON:0000955!4.34e-35!50;UBERON:0006238!4.34e-35!50;UBERON:0002346!5.49e-31!71;UBERON:0003075!5.49e-31!71;UBERON:0007284!5.49e-31!71;UBERON:0002020!6.20e-31!34;UBERON:0003080!3.49e-30!40;UBERON:0002780!7.01e-29!39;UBERON:0001890!7.01e-29!39;UBERON:0006240!7.01e-29!39;UBERON:0004121!3.96e-28!102;UBERON:0000924!3.96e-28!102;UBERON:0006601!3.96e-28!102;UBERON:0000033!3.55e-27!63;UBERON:0003056!1.40e-24!49;UBERON:0002791!1.91e-23!29;UBERON:0003528!1.91e-23!29;UBERON:0001893!1.91e-23!29;UBERON:0007811!4.66e-17!86;UBERON:0002021!5.59e-15!10;UBERON:0000411!5.59e-15!10;UBERON:0001950!5.59e-15!10;UBERON:0000956!1.01e-14!21;UBERON:0001869!1.01e-14!21;UBERON:0000203!1.01e-14!21;UBERON:0000153!1.02e-14!94;UBERON:0002619!1.16e-14!17;UBERON:0000025!2.94e-12!114;UBERON:0004111!9.23e-11!122;UBERON:0002240!3.66e-10!6;UBERON:0005174!3.66e-10!6;UBERON:0001137!3.66e-10!6;UBERON:0002420!3.74e-10!8;UBERON:0007245!3.74e-10!8;UBERON:0010009!3.74e-10!8;UBERON:0010011!3.74e-10!8;UBERON:0000454!3.74e-10!8;UBERON:0002298!4.38e-10!6;UBERON:0003076!7.94e-10!12;UBERON:0003057!7.94e-10!12;UBERON:0001948!4.75e-09!5;UBERON:0002315!4.75e-09!5;UBERON:0002950!1.61e-07!4;UBERON:0001891!1.61e-07!4;UBERON:0009616!1.61e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.28e-23,54;UBERON:0002020,3.32e-21,34;UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0004684,1.23e-15,3;UBERON:0002275,1.23e-15,3;UBERON:0001049,1.92e-15,52;UBERON:0005068,1.92e-15,52;UBERON:0006241,1.92e-15,52;UBERON:0007135,1.92e-15,52;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0001948,2.15e-15,5;UBERON:0002315,2.15e-15,5;UBERON:0002257,4.13e-15,3;UBERON:0002038,4.61e-15,3;UBERON:0009663,4.61e-15,3;UBERON:0009661,4.61e-15,3;UBERON:0000125,4.61e-15,3;UBERON:0002308,4.61e-15,3;UBERON:0002420,9.56e-15,8;UBERON:0007245,9.56e-15,8;UBERON:0010009,9.56e-15,8;UBERON:0010011,9.56e-15,8;UBERON:0000454,9.56e-15,8;UBERON:0002240,7.28e-13,6;UBERON:0005174,7.28e-13,6;UBERON:0001137,7.28e-13,6;UBERON:0002346,3.86e-12,64;UBERON:0003075,3.86e-12,64;UBERON:0007284,3.86e-12,64;UBERON:0003528,9.22e-12,29;UBERON:0002791,9.22e-12,29;UBERON:0001893,9.22e-12,29;UBERON:0002950,1.97e-11,4;UBERON:0001891,1.97e-11,4;UBERON:0009616,1.97e-11,4;UBERON:0010286,1.97e-11,4;UBERON:0002780,1.84e-10,39;UBERON:0001890,1.84e-10,39;UBERON:0006240,1.84e-10,39;UBERON:0010371,2.27e-10,73;UBERON:0003080,3.65e-10,40;UBERON:0002616,1.20e-08,46;UBERON:0000955,1.97e-08,47;UBERON:0006238,1.97e-08,47;UBERON:0003056,4.99e-08,49;UBERON:0010314,9.18e-08,92;UBERON:0002021,1.92e-07,10;UBERON:0000411,1.92e-07,10;UBERON:0001950,1.92e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0.856952953211411,1.32521124570968,0.122490799214954,0.191690942036473,0,2.20231761998777,2.042997409363,3.07213066512487,0.923204014111357,1.37231465403614,1.56274011167028,2.79182999001381,1.12552522006336,2.29197371665215,2.06240009831567,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,0.457500602818626,0,0,0,1.45451631191692,0.648965052271031,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr5:145497411..145497422,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:145497411..145497422,- | |||
|id=chr5:145497411..145497422,- | |||
|ontology_enrichment_celltype=CL:0000117!4.61e-28!23;CL:0000337!4.61e-28!23;CL:0000540!3.04e-21!33;CL:0000047!3.04e-21!33;CL:0000031!3.04e-21!33;CL:0000404!3.04e-21!33;CL:0000393!6.59e-17!39;CL:0000211!6.59e-17!39;CL:0002319!1.06e-14!43;CL:0000221!3.25e-14!44;CL:0000133!3.25e-14!44;CL:0000055!1.03e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-38,23;CL:0000337,1.85e-38,23;CL:0000540,3.46e-26,33;CL:0000047,3.46e-26,33;CL:0000031,3.46e-26,33;CL:0000404,3.46e-26,33;CL:0000393,7.77e-22,39;CL:0000211,7.77e-22,39;CL:0002319,1.32e-19,43;CL:0000221,4.10e-19,44;CL:0000133,4.10e-19,44;CL:0002610,1.23e-15,3;CL:0002612,4.13e-15,3;CL:0002614,4.61e-15,3;CL:0002321,3.37e-11,70;CL:0000723,4.32e-08,91;CL:0000048,4.32e-08,91;CL:0000034,1.90e-07,97;CL:0002613,4.17e-07,3;CL:0000120,5.15e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.68e-41!73;UBERON:0005743!8.68e-41!73;UBERON:0001049!4.25e-40!52;UBERON:0005068!4.25e-40!52;UBERON:0006241!4.25e-40!52;UBERON:0007135!4.25e-40!52;UBERON:0000073!2.34e-39!75;UBERON:0001016!2.34e-39!75;UBERON:0002616!5.04e-36!49;UBERON:0000955!4.34e-35!50;UBERON:0006238!4.34e-35!50;UBERON:0002346!5.49e-31!71;UBERON:0003075!5.49e-31!71;UBERON:0007284!5.49e-31!71;UBERON:0002020!6.20e-31!34;UBERON:0003080!3.49e-30!40;UBERON:0002780!7.01e-29!39;UBERON:0001890!7.01e-29!39;UBERON:0006240!7.01e-29!39;UBERON:0004121!3.96e-28!102;UBERON:0000924!3.96e-28!102;UBERON:0006601!3.96e-28!102;UBERON:0000033!3.55e-27!63;UBERON:0003056!1.40e-24!49;UBERON:0002791!1.91e-23!29;UBERON:0003528!1.91e-23!29;UBERON:0001893!1.91e-23!29;UBERON:0007811!4.66e-17!86;UBERON:0002021!5.59e-15!10;UBERON:0000411!5.59e-15!10;UBERON:0001950!5.59e-15!10;UBERON:0000956!1.01e-14!21;UBERON:0001869!1.01e-14!21;UBERON:0000203!1.01e-14!21;UBERON:0000153!1.02e-14!94;UBERON:0002619!1.16e-14!17;UBERON:0000025!2.94e-12!114;UBERON:0004111!9.23e-11!122;UBERON:0002240!3.66e-10!6;UBERON:0005174!3.66e-10!6;UBERON:0001137!3.66e-10!6;UBERON:0002420!3.74e-10!8;UBERON:0007245!3.74e-10!8;UBERON:0010009!3.74e-10!8;UBERON:0010011!3.74e-10!8;UBERON:0000454!3.74e-10!8;UBERON:0002298!4.38e-10!6;UBERON:0003076!7.94e-10!12;UBERON:0003057!7.94e-10!12;UBERON:0001948!4.75e-09!5;UBERON:0002315!4.75e-09!5;UBERON:0002950!1.61e-07!4;UBERON:0001891!1.61e-07!4;UBERON:0009616!1.61e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.28e-23,54;UBERON:0002020,3.32e-21,34;UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0004684,1.23e-15,3;UBERON:0002275,1.23e-15,3;UBERON:0001049,1.92e-15,52;UBERON:0005068,1.92e-15,52;UBERON:0006241,1.92e-15,52;UBERON:0007135,1.92e-15,52;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0001948,2.15e-15,5;UBERON:0002315,2.15e-15,5;UBERON:0002257,4.13e-15,3;UBERON:0002038,4.61e-15,3;UBERON:0009663,4.61e-15,3;UBERON:0009661,4.61e-15,3;UBERON:0000125,4.61e-15,3;UBERON:0002308,4.61e-15,3;UBERON:0002420,9.56e-15,8;UBERON:0007245,9.56e-15,8;UBERON:0010009,9.56e-15,8;UBERON:0010011,9.56e-15,8;UBERON:0000454,9.56e-15,8;UBERON:0002240,7.28e-13,6;UBERON:0005174,7.28e-13,6;UBERON:0001137,7.28e-13,6;UBERON:0002346,3.86e-12,64;UBERON:0003075,3.86e-12,64;UBERON:0007284,3.86e-12,64;UBERON:0003528,9.22e-12,29;UBERON:0002791,9.22e-12,29;UBERON:0001893,9.22e-12,29;UBERON:0002950,1.97e-11,4;UBERON:0001891,1.97e-11,4;UBERON:0009616,1.97e-11,4;UBERON:0010286,1.97e-11,4;UBERON:0002780,1.84e-10,39;UBERON:0001890,1.84e-10,39;UBERON:0006240,1.84e-10,39;UBERON:0010371,2.27e-10,73;UBERON:0003080,3.65e-10,40;UBERON:0002616,1.20e-08,46;UBERON:0000955,1.97e-08,47;UBERON:0006238,1.97e-08,47;UBERON:0003056,4.99e-08,49;UBERON:0010314,9.18e-08,92;UBERON:0002021,1.92e-07,10;UBERON:0000411,1.92e-07,10;UBERON:0001950,1.92e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0.856952953211411,1.32521124570968,0.122490799214954,0.191690942036473,0,2.20231761998777,2.042997409363,3.07213066512487,0.923204014111357,1.37231465403614,1.56274011167028,2.79182999001381,1.12552522006336,2.29197371665215,2.06240009831567,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,0.457500602818626,0,0,0,1.45451631191692,0.648965052271031,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr5:145497411..145497422,- | |||
}} |
Revision as of 07:00, 14 September 2013
Short description: | p@chr5:145497411..145497422, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:145497411..145497422, - |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.85e-38 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-38 | 23 |
neuron | 3.46e-26 | 33 |
neuronal stem cell | 3.46e-26 | 33 |
neuroblast | 3.46e-26 | 33 |
electrically signaling cell | 3.46e-26 | 33 |
electrically responsive cell | 7.77e-22 | 39 |
electrically active cell | 7.77e-22 | 39 |
neural cell | 1.32e-19 | 43 |
ectodermal cell | 4.10e-19 | 44 |
neurectodermal cell | 4.10e-19 | 44 |
raphe nuclei neuron | 1.23e-15 | 3 |
neuron of the ventral spinal cord | 4.13e-15 | 3 |
neuron of the substantia nigra | 4.61e-15 | 3 |
embryonic cell | 3.37e-11 | 70 |
somatic stem cell | 4.32e-08 | 91 |
multi fate stem cell | 4.32e-08 | 91 |
stem cell | 1.90e-07 | 97 |
striatum neuron | 4.17e-07 | 3 |
granule cell | 5.15e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.