FFCP PHASE1:Mm9::chr17:66943913..66943931,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74556|HGNC=|MCL_coexpression_id=12|UniProt=Q9CU24|association_with_transcript=29bp_to_ENSMUST00000024914_5end|description=CAGE_peak_2_at_9130404H23Rik_5end|id=chr17:66943913..66943931,-|ontology_enrichment_celltype=CL:0000239!1.28e-10!6;CL:0000677!1.28e-10!6;CL:0000212!1.28e-10!6;CL:0000584!1.28e-10!6;CL:0000075!5.93e-09!7;CL:0002563!1.15e-08!9;CL:0002251!1.15e-08!9|ontology_enrichment_celltype_v019_2=CL:0000682,2.32e-10,3;CL:0000239,3.54e-09,6;CL:0000677,3.54e-09,6;CL:0000584,3.54e-09,6;CL:0000075,7.25e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.17e-21!43;UBERON:0000344!8.50e-18!15;UBERON:0005409!2.90e-16!59;UBERON:0001242!7.21e-15!13;UBERON:0000060!7.21e-15!13;UBERON:0001262!7.21e-15!13;UBERON:0004786!7.21e-15!13;UBERON:0004923!8.99e-10!24;UBERON:0003350!1.15e-08!9;UBERON:0004808!1.15e-08!9;UBERON:0001277!1.15e-08!9;UBERON:0000485!7.55e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.64e-45,31;UBERON:0005409,4.14e-31,47;UBERON:0000344,2.38e-20,15;UBERON:0001242,1.81e-15,13;UBERON:0001262,1.81e-15,13;UBERON:0004786,1.81e-15,13;UBERON:0002108,1.46e-13,4;UBERON:0001007,2.84e-12,116;UBERON:0001555,2.84e-12,116;UBERON:0007026,2.84e-12,116;UBERON:0004923,5.21e-12,24;UBERON:0004119,5.55e-12,118;UBERON:0000925,5.55e-12,118;UBERON:0006595,5.55e-12,118;UBERON:0000331,1.50e-10,3;UBERON:0002116,1.50e-10,3;UBERON:0001204,1.50e-10,3;UBERON:0001168,1.50e-10,3;UBERON:0004921,3.88e-10,114;UBERON:0001155,3.22e-07,2;UBERON:0000059,3.22e-07,2;UBERON:0001962,4.60e-07,2;UBERON:0001961,4.60e-07,2;UBERON:0001744,4.60e-07,2|phase1_expression=0,13.6100408979351,10.4649825059593,8.77146212789807,6.51164448930251,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,5.50582274561208,8.6134794617253,5.1691439539089,9.69620547086501,16.3420140732482,8.56902441183765,5.76499327703792,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,11.4955674843866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7202031664446,1.58670339998127,0,0,0,0,2.66853652613844,2.66315876557583,4.2707615539006,4.94096864172033,4.52403375840485,5.76973768919337,4.67913809085888,5.39291645192533,6.70027954611552,9.55878111620963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0.492422699235184,9.03590593552537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0,0|short_description=p2@9130404H23Rik}} | ||
|EntrezGene=74556 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9CU24 | |||
|association_with_transcript=29bp_to_ENSMUST00000024914_5end | |||
|description=CAGE_peak_2_at_9130404H23Rik_5end | |||
|id=chr17:66943913..66943931,- | |||
|ontology_enrichment_celltype=CL:0000239!1.28e-10!6;CL:0000677!1.28e-10!6;CL:0000212!1.28e-10!6;CL:0000584!1.28e-10!6;CL:0000075!5.93e-09!7;CL:0002563!1.15e-08!9;CL:0002251!1.15e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.32e-10,3;CL:0000239,3.54e-09,6;CL:0000677,3.54e-09,6;CL:0000584,3.54e-09,6;CL:0000075,7.25e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.17e-21!43;UBERON:0000344!8.50e-18!15;UBERON:0005409!2.90e-16!59;UBERON:0001242!7.21e-15!13;UBERON:0000060!7.21e-15!13;UBERON:0001262!7.21e-15!13;UBERON:0004786!7.21e-15!13;UBERON:0004923!8.99e-10!24;UBERON:0003350!1.15e-08!9;UBERON:0004808!1.15e-08!9;UBERON:0001277!1.15e-08!9;UBERON:0000485!7.55e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.64e-45,31;UBERON:0005409,4.14e-31,47;UBERON:0000344,2.38e-20,15;UBERON:0001242,1.81e-15,13;UBERON:0001262,1.81e-15,13;UBERON:0004786,1.81e-15,13;UBERON:0002108,1.46e-13,4;UBERON:0001007,2.84e-12,116;UBERON:0001555,2.84e-12,116;UBERON:0007026,2.84e-12,116;UBERON:0004923,5.21e-12,24;UBERON:0004119,5.55e-12,118;UBERON:0000925,5.55e-12,118;UBERON:0006595,5.55e-12,118;UBERON:0000331,1.50e-10,3;UBERON:0002116,1.50e-10,3;UBERON:0001204,1.50e-10,3;UBERON:0001168,1.50e-10,3;UBERON:0004921,3.88e-10,114;UBERON:0001155,3.22e-07,2;UBERON:0000059,3.22e-07,2;UBERON:0001962,4.60e-07,2;UBERON:0001961,4.60e-07,2;UBERON:0001744,4.60e-07,2 | |||
|phase1_expression=0,13.6100408979351,10.4649825059593,8.77146212789807,6.51164448930251,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,5.50582274561208,8.6134794617253,5.1691439539089,9.69620547086501,16.3420140732482,8.56902441183765,5.76499327703792,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,11.4955674843866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7202031664446,1.58670339998127,0,0,0,0,2.66853652613844,2.66315876557583,4.2707615539006,4.94096864172033,4.52403375840485,5.76973768919337,4.67913809085888,5.39291645192533,6.70027954611552,9.55878111620963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0.492422699235184,9.03590593552537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p2@9130404H23Rik | |||
}} |
Revision as of 15:09, 13 September 2013
Short description: | p2@9130404H23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_9130404H23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 29bp_to_ENSMUST00000024914_5end |
EntrezGene: | 9130404H23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.32e-10 | 3 |
brush border epithelial cell | 3.54e-09 | 6 |
gut absorptive cell | 3.54e-09 | 6 |
enterocyte | 3.54e-09 | 6 |
columnar/cuboidal epithelial cell | 7.25e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.64e-45 | 31 |
gastrointestinal system | 4.14e-31 | 47 |
mucosa | 2.38e-20 | 15 |
intestinal mucosa | 1.81e-15 | 13 |
wall of intestine | 1.81e-15 | 13 |
gastrointestinal system mucosa | 1.81e-15 | 13 |
small intestine | 1.46e-13 | 4 |
digestive system | 2.84e-12 | 116 |
digestive tract | 2.84e-12 | 116 |
primitive gut | 2.84e-12 | 116 |
organ component layer | 5.21e-12 | 24 |
endoderm-derived structure | 5.55e-12 | 118 |
endoderm | 5.55e-12 | 118 |
presumptive endoderm | 5.55e-12 | 118 |
ileal mucosa | 1.50e-10 | 3 |
ileum | 1.50e-10 | 3 |
mucosa of small intestine | 1.50e-10 | 3 |
wall of small intestine | 1.50e-10 | 3 |
subdivision of digestive tract | 3.88e-10 | 114 |
colon | 3.22e-07 | 2 |
large intestine | 3.22e-07 | 2 |
gut-associated lymphoid tissue | 4.60e-07 | 2 |
mucosa-associated lymphoid tissue | 4.60e-07 | 2 |
lymphoid tissue | 4.60e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.