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FFCP PHASE1:Mm9::chr2:91803903..91803917,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=104418|HGNC=|MCL_coexpression_id=30|UniProt=Q80UP3|association_with_transcript=-89bp_to_ENSMUST00000028667_5end|description=CAGE_peak_8_at_Dgkz_5end|id=chr2:91803903..91803917,-|ontology_enrichment_celltype=CL:0000117!4.87e-07!23;CL:0000337!4.87e-07!23;CL:0002319!5.19e-07!43|ontology_enrichment_celltype_v019_2=CL:0002092,1.84e-07,3;CL:0002540,1.84e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.64e-15!75;UBERON:0001016!2.64e-15!75;UBERON:0001017!8.97e-15!73;UBERON:0005743!8.97e-15!73;UBERON:0001049!1.96e-13!52;UBERON:0005068!1.96e-13!52;UBERON:0006241!1.96e-13!52;UBERON:0007135!1.96e-13!52;UBERON:0000955!4.87e-13!50;UBERON:0006238!4.87e-13!50;UBERON:0002020!4.99e-13!34;UBERON:0002616!1.83e-12!49;UBERON:0002791!2.18e-12!29;UBERON:0003528!2.18e-12!29;UBERON:0001893!2.18e-12!29;UBERON:0003080!5.47e-10!40;UBERON:0004121!6.50e-10!102;UBERON:0000924!6.50e-10!102;UBERON:0006601!6.50e-10!102;UBERON:0002780!1.65e-09!39;UBERON:0001890!1.65e-09!39;UBERON:0006240!1.65e-09!39;UBERON:0000956!9.34e-09!21;UBERON:0001869!9.34e-09!21;UBERON:0000203!9.34e-09!21;UBERON:0002346!2.11e-08!71;UBERON:0003075!2.11e-08!71;UBERON:0007284!2.11e-08!71;UBERON:0000033!6.08e-08!63;UBERON:0000064!1.61e-07!99;UBERON:0007811!2.11e-07!86;UBERON:0003056!7.11e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-20,73;UBERON:0000955,2.86e-20,47;UBERON:0006238,2.86e-20,47;UBERON:0001016,6.80e-20,75;UBERON:0002616,7.80e-19,46;UBERON:0000073,2.84e-18,54;UBERON:0001049,1.38e-17,52;UBERON:0005068,1.38e-17,52;UBERON:0006241,1.38e-17,52;UBERON:0007135,1.38e-17,52;UBERON:0003528,1.27e-16,29;UBERON:0002791,1.27e-16,29;UBERON:0001893,1.27e-16,29;UBERON:0003080,6.18e-16,40;UBERON:0002020,2.46e-15,34;UBERON:0002780,9.93e-15,39;UBERON:0001890,9.93e-15,39;UBERON:0006240,9.93e-15,39;UBERON:0004121,3.85e-14,95;UBERON:0000924,3.85e-14,95;UBERON:0006601,3.85e-14,95;UBERON:0002346,3.53e-13,64;UBERON:0003075,3.53e-13,64;UBERON:0007284,3.53e-13,64;UBERON:0003056,4.12e-12,49;UBERON:0000956,9.42e-12,21;UBERON:0001869,9.42e-12,21;UBERON:0000203,9.42e-12,21;UBERON:0010371,7.75e-11,73;UBERON:0002021,3.51e-09,10;UBERON:0000411,3.51e-09,10;UBERON:0001950,3.51e-09,10;UBERON:0002619,2.26e-08,17;UBERON:0002950,7.08e-08,4;UBERON:0001891,7.08e-08,4;UBERON:0009616,7.08e-08,4;UBERON:0010286,7.08e-08,4;UBERON:0010314,1.95e-07,92|phase1_expression=0.160148847104794,0.697950815278722,1.36499771816861,1.81478526784098,1.50268718983904,0.16787927191189,0,0.258246646883153,0.563154888606667,0.70219357896598,0.171217968225505,0.717949430958028,1.02720437958723,0.874204024189974,0,0,0,0.315462165358238,0,0,1.61582251287033,0.0992909512008853,0,0.47997726838022,0.91763712426868,1.72269589234506,0,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0.218025156380447,0.219686182734472,0.58328969722285,0.55994568650145,4.31257693094915,0.167782606057736,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,3.1496490104849,1.97773272513395,1.4209602298922,1.49800055259202,1.15265491596466,1.24427534770173,0.945041568321835,1.05162480675691,0.571301968807607,0.220868540951614,0.734944795289724,0.670918297127655,0,0,0.893811366596314,1.0752457327937,0.791317726381163,0.548925861614458,0.52091337055676,1.3959149950069,1.12552522006336,1.22238598221448,1.17851434189467,0.427115042397309,0.372798891650601,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,21.6657789788545,24.2958179903608,0.255457055208591,0,0,0.254140454146129,1.19832511523858,1.37250180845588,2.1361239859187,4.17178368461463,4.09144731728529,1.45451631191692,1.94689515681309,0,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0,0.150704817835715,0,0.12811372028485,0.281105173679186,0,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0,0.243206428637567,0.730999937126662,0.219550115291051,0,5.25724871410318,1.23485534855141,0.660837565967596,0.528901133327089,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,1.14135375667535,0.949058123089023,0.823494773620054,0,0.397912944082302,1.9496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.147610147979602,0.470996183524124,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.757965647081939,0,0.339490171550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|EntrezGene=104418
|HGNC=
|MCL_coexpression_id=30
|UniProt=Q80UP3
|association_with_transcript=-89bp_to_ENSMUST00000028667_5end
|description=CAGE_peak_8_at_Dgkz_5end
|id=chr2:91803903..91803917,-
|ontology_enrichment_celltype=CL:0000117!4.87e-07!23;CL:0000337!4.87e-07!23;CL:0002319!5.19e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002092,1.84e-07,3;CL:0002540,1.84e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.64e-15!75;UBERON:0001016!2.64e-15!75;UBERON:0001017!8.97e-15!73;UBERON:0005743!8.97e-15!73;UBERON:0001049!1.96e-13!52;UBERON:0005068!1.96e-13!52;UBERON:0006241!1.96e-13!52;UBERON:0007135!1.96e-13!52;UBERON:0000955!4.87e-13!50;UBERON:0006238!4.87e-13!50;UBERON:0002020!4.99e-13!34;UBERON:0002616!1.83e-12!49;UBERON:0002791!2.18e-12!29;UBERON:0003528!2.18e-12!29;UBERON:0001893!2.18e-12!29;UBERON:0003080!5.47e-10!40;UBERON:0004121!6.50e-10!102;UBERON:0000924!6.50e-10!102;UBERON:0006601!6.50e-10!102;UBERON:0002780!1.65e-09!39;UBERON:0001890!1.65e-09!39;UBERON:0006240!1.65e-09!39;UBERON:0000956!9.34e-09!21;UBERON:0001869!9.34e-09!21;UBERON:0000203!9.34e-09!21;UBERON:0002346!2.11e-08!71;UBERON:0003075!2.11e-08!71;UBERON:0007284!2.11e-08!71;UBERON:0000033!6.08e-08!63;UBERON:0000064!1.61e-07!99;UBERON:0007811!2.11e-07!86;UBERON:0003056!7.11e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-20,73;UBERON:0000955,2.86e-20,47;UBERON:0006238,2.86e-20,47;UBERON:0001016,6.80e-20,75;UBERON:0002616,7.80e-19,46;UBERON:0000073,2.84e-18,54;UBERON:0001049,1.38e-17,52;UBERON:0005068,1.38e-17,52;UBERON:0006241,1.38e-17,52;UBERON:0007135,1.38e-17,52;UBERON:0003528,1.27e-16,29;UBERON:0002791,1.27e-16,29;UBERON:0001893,1.27e-16,29;UBERON:0003080,6.18e-16,40;UBERON:0002020,2.46e-15,34;UBERON:0002780,9.93e-15,39;UBERON:0001890,9.93e-15,39;UBERON:0006240,9.93e-15,39;UBERON:0004121,3.85e-14,95;UBERON:0000924,3.85e-14,95;UBERON:0006601,3.85e-14,95;UBERON:0002346,3.53e-13,64;UBERON:0003075,3.53e-13,64;UBERON:0007284,3.53e-13,64;UBERON:0003056,4.12e-12,49;UBERON:0000956,9.42e-12,21;UBERON:0001869,9.42e-12,21;UBERON:0000203,9.42e-12,21;UBERON:0010371,7.75e-11,73;UBERON:0002021,3.51e-09,10;UBERON:0000411,3.51e-09,10;UBERON:0001950,3.51e-09,10;UBERON:0002619,2.26e-08,17;UBERON:0002950,7.08e-08,4;UBERON:0001891,7.08e-08,4;UBERON:0009616,7.08e-08,4;UBERON:0010286,7.08e-08,4;UBERON:0010314,1.95e-07,92
|phase1_expression=0.160148847104794,0.697950815278722,1.36499771816861,1.81478526784098,1.50268718983904,0.16787927191189,0,0.258246646883153,0.563154888606667,0.70219357896598,0.171217968225505,0.717949430958028,1.02720437958723,0.874204024189974,0,0,0,0.315462165358238,0,0,1.61582251287033,0.0992909512008853,0,0.47997726838022,0.91763712426868,1.72269589234506,0,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0.218025156380447,0.219686182734472,0.58328969722285,0.55994568650145,4.31257693094915,0.167782606057736,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,3.1496490104849,1.97773272513395,1.4209602298922,1.49800055259202,1.15265491596466,1.24427534770173,0.945041568321835,1.05162480675691,0.571301968807607,0.220868540951614,0.734944795289724,0.670918297127655,0,0,0.893811366596314,1.0752457327937,0.791317726381163,0.548925861614458,0.52091337055676,1.3959149950069,1.12552522006336,1.22238598221448,1.17851434189467,0.427115042397309,0.372798891650601,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,21.6657789788545,24.2958179903608,0.255457055208591,0,0,0.254140454146129,1.19832511523858,1.37250180845588,2.1361239859187,4.17178368461463,4.09144731728529,1.45451631191692,1.94689515681309,0,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0,0.150704817835715,0,0.12811372028485,0.281105173679186,0,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0,0.243206428637567,0.730999937126662,0.219550115291051,0,5.25724871410318,1.23485534855141,0.660837565967596,0.528901133327089,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,1.14135375667535,0.949058123089023,0.823494773620054,0,0.397912944082302,1.9496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.147610147979602,0.470996183524124,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.757965647081939,0,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0,0.797273843287435,0.327726629431476,0,0,0,0,0.983528546038072,0,0.481651769963376,0.937693492737625,0,0.504941854408746,0,0,0.430846795465598,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,1.60660658210904,0.283880170416537,0.534196811001766,0.325773918707152,0.164970122972535,0,0,1.209294227859,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.535106452806212,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.241251699712623,0.477489376012546,0.164140899745061,0.291480836629851,0.556275906031529,0.170870880797853,0,0.185194527369712,0,0,0,0.339956859987711,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.785267825952089,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.39736270956253,0.480781798079875,0.443068581523732,0.100966449948148,0.381034033274999,0.504130925684203,0.292373642219257,0.288635524920988,0,0,0,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0.643105137237198,0,1.6942555278512,0.460325236507177,1.14579102687879,1.03111909406213,2.74033007908257,1.5107877947794,0.675022500231806,0.45032120322422,1.81256963593682,1.03552062350364,0.31136204275253,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.512201219238954,0.689225627467359,0,0.463537303779422,0.578727661391115,0,0.294397840268795,0,0.354951612318675,0.715308569841963,0.290692833264657,0.0941093804153306,0.676916863133412,0.548783918618318,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p8@Dgkz
}}

Revision as of 00:53, 14 September 2013

Short description:p8@Dgkz
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Dgkz_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: -89bp_to_ENSMUST00000028667_5end
EntrezGene:Dgkz
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p8@Dgkz

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I224.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
bone marrow cell1.84e-073
mesenchymal stem cell of the bone marrow1.84e-073

Uber anatomy
Ontology termp-valuen
central nervous system1.21e-2073
brain2.86e-2047
future brain2.86e-2047
nervous system6.80e-2075
regional part of brain7.80e-1946
regional part of nervous system2.84e-1854
neural tube1.38e-1752
neural rod1.38e-1752
future spinal cord1.38e-1752
neural keel1.38e-1752
brain grey matter1.27e-1629
regional part of telencephalon1.27e-1629
telencephalon1.27e-1629
anterior neural tube6.18e-1640
gray matter2.46e-1534
regional part of forebrain9.93e-1539
forebrain9.93e-1539
future forebrain9.93e-1539
ectoderm-derived structure3.85e-1495
ectoderm3.85e-1495
presumptive ectoderm3.85e-1495
neurectoderm3.53e-1364
neural plate3.53e-1364
presumptive neural plate3.53e-1364
pre-chordal neural plate4.12e-1249
cerebral cortex9.42e-1221
cerebral hemisphere9.42e-1221
pallium9.42e-1221
ecto-epithelium7.75e-1173
occipital lobe3.51e-0910
visual cortex3.51e-0910
neocortex3.51e-0910
regional part of cerebral cortex2.26e-0817
regional part of midbrain7.08e-084
midbrain7.08e-084
presumptive midbrain7.08e-084
midbrain neural tube7.08e-084
structure with developmental contribution from neural crest1.95e-0792







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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