FFCP PHASE1:Mm9::chr2:92755279..92755284,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80976|HGNC=|MCL_coexpression_id=1|UniProt=A2AGX5,Q9EQT6|association_with_transcript=21bp_to_NM_030725,uc008lfn.1_5end|description=CAGE_peak_4_at_Syt13_5end|id=chr2:92755279..92755284,+|ontology_enrichment_celltype=CL:0000117!6.87e-07!23;CL:0000337!6.87e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-14,23;CL:0000337,2.45e-14,23;CL:0000540,3.01e-09,33;CL:0000047,3.01e-09,33;CL:0000031,3.01e-09,33;CL:0000404,3.01e-09,33;CL:0002614,6.44e-09,3;CL:0002613,1.19e-08,3;CL:0000393,1.86e-07,39;CL:0000211,1.86e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.16e-19!52;UBERON:0005068!4.16e-19!52;UBERON:0006241!4.16e-19!52;UBERON:0007135!4.16e-19!52;UBERON:0000033!1.25e-16!63;UBERON:0002346!1.29e-16!71;UBERON:0003075!1.29e-16!71;UBERON:0007284!1.29e-16!71;UBERON:0000955!1.65e-16!50;UBERON:0006238!1.65e-16!50;UBERON:0002616!6.46e-16!49;UBERON:0001017!8.74e-16!73;UBERON:0005743!8.74e-16!73;UBERON:0000073!7.42e-15!75;UBERON:0001016!7.42e-15!75;UBERON:0003056!1.94e-14!49;UBERON:0002020!2.52e-14!34;UBERON:0007811!3.08e-14!86;UBERON:0003080!7.84e-14!40;UBERON:0002780!3.85e-13!39;UBERON:0001890!3.85e-13!39;UBERON:0006240!3.85e-13!39;UBERON:0000153!5.34e-12!94;UBERON:0004121!1.06e-11!102;UBERON:0000924!1.06e-11!102;UBERON:0006601!1.06e-11!102;UBERON:0002791!5.73e-11!29;UBERON:0003528!5.73e-11!29;UBERON:0001893!5.73e-11!29;UBERON:0002021!4.24e-10!10;UBERON:0000411!4.24e-10!10;UBERON:0001950!4.24e-10!10;UBERON:0002420!2.98e-07!8;UBERON:0007245!2.98e-07!8;UBERON:0010009!2.98e-07!8;UBERON:0010011!2.98e-07!8;UBERON:0000454!2.98e-07!8;UBERON:0002619!5.22e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.52e-40,54;UBERON:0001049,3.24e-38,52;UBERON:0005068,3.24e-38,52;UBERON:0006241,3.24e-38,52;UBERON:0007135,3.24e-38,52;UBERON:0002020,1.02e-34,34;UBERON:0001017,4.20e-30,73;UBERON:0002346,5.97e-30,64;UBERON:0003075,5.97e-30,64;UBERON:0007284,5.97e-30,64;UBERON:0002616,1.44e-29,46;UBERON:0001016,3.86e-29,75;UBERON:0003080,5.48e-29,40;UBERON:0000955,7.96e-29,47;UBERON:0006238,7.96e-29,47;UBERON:0003528,9.04e-28,29;UBERON:0002791,9.04e-28,29;UBERON:0001893,9.04e-28,29;UBERON:0002021,2.12e-27,10;UBERON:0000411,2.12e-27,10;UBERON:0001950,2.12e-27,10;UBERON:0002780,4.40e-27,39;UBERON:0001890,4.40e-27,39;UBERON:0006240,4.40e-27,39;UBERON:0010371,1.57e-25,73;UBERON:0003056,9.46e-23,49;UBERON:0004121,1.01e-21,95;UBERON:0000924,1.01e-21,95;UBERON:0006601,1.01e-21,95;UBERON:0010314,5.00e-19,92;UBERON:0002619,2.07e-18,17;UBERON:0000956,2.37e-17,21;UBERON:0001869,2.37e-17,21;UBERON:0000203,2.37e-17,21;UBERON:0000025,3.39e-14,114;UBERON:0004111,7.20e-13,122;UBERON:0002420,8.53e-12,8;UBERON:0007245,8.53e-12,8;UBERON:0010009,8.53e-12,8;UBERON:0010011,8.53e-12,8;UBERON:0000454,8.53e-12,8;UBERON:0002950,4.23e-11,4;UBERON:0001891,4.23e-11,4;UBERON:0009616,4.23e-11,4;UBERON:0010286,4.23e-11,4;UBERON:0002240,4.86e-10,6;UBERON:0005174,4.86e-10,6;UBERON:0001137,4.86e-10,6;UBERON:0003076,3.11e-09,12;UBERON:0003057,3.11e-09,12;UBERON:0002038,6.44e-09,3;UBERON:0009663,6.44e-09,3;UBERON:0009661,6.44e-09,3;UBERON:0000125,6.44e-09,3;UBERON:0002308,6.44e-09,3;UBERON:0001948,4.43e-08,5;UBERON:0002315,4.43e-08,5;UBERON:0011216,2.01e-07,194;UBERON:0000483,3.35e-07,174;UBERON:0000119,4.74e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,1.99955689082663,1.76694832761291,0.244981598429908,0,0,0,3.44755812830007,5.37622866396852,3.42904348098504,3.93396867490361,1.04182674111352,3.62937898701795,2.8138130501584,3.36156145108982,0.883885756421003,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,2.30391377494801,0,0,0,0,1.9472783122627,0.915001205637253,0.376963056338593,3.65031072403781,3.06858548796397,3.1168206683934,2.43361894601636,0.305518091550949,0,0,0.210441855886474,0,0,0.540186389416048,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.3131894342054,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.64096361229084,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0.35613120733451,0.488660878060728,0,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,1.81766864738753,1.06949213515416,0.316036757935816,0,0,1.02131881726136,0,0,0,0.354680467284547,0.535106452806212,0.822745103010605,0.913394847343798,0,0.21183207086382,0,0,0,0.120625849856312,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.496375471371293,0.583353565032143,0.387479470433193,0.844780627453891,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0,0.504832249740738,0.304827226619999,0.100826185136841,0.38983152295901,0.384847366561318,0.584384510907845,0,0,0,0.335769232728157,0.19318959403219,0,0,0.214368379079066,0,2.25900737046827,3.68260189205742,1.71868654031819,4.29632955859219,3.42541259885321,9.82012066606611,4.72515750162264,4.05289082901798,5.89085131679466,7.24864436452548,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0|short_description=p4@Syt13}} | ||
|EntrezGene=80976 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=A2AGX5,Q9EQT6 | |||
|association_with_transcript=21bp_to_NM_030725,uc008lfn.1_5end | |||
|description=CAGE_peak_4_at_Syt13_5end | |||
|id=chr2:92755279..92755284,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.87e-07!23;CL:0000337!6.87e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-14,23;CL:0000337,2.45e-14,23;CL:0000540,3.01e-09,33;CL:0000047,3.01e-09,33;CL:0000031,3.01e-09,33;CL:0000404,3.01e-09,33;CL:0002614,6.44e-09,3;CL:0002613,1.19e-08,3;CL:0000393,1.86e-07,39;CL:0000211,1.86e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.16e-19!52;UBERON:0005068!4.16e-19!52;UBERON:0006241!4.16e-19!52;UBERON:0007135!4.16e-19!52;UBERON:0000033!1.25e-16!63;UBERON:0002346!1.29e-16!71;UBERON:0003075!1.29e-16!71;UBERON:0007284!1.29e-16!71;UBERON:0000955!1.65e-16!50;UBERON:0006238!1.65e-16!50;UBERON:0002616!6.46e-16!49;UBERON:0001017!8.74e-16!73;UBERON:0005743!8.74e-16!73;UBERON:0000073!7.42e-15!75;UBERON:0001016!7.42e-15!75;UBERON:0003056!1.94e-14!49;UBERON:0002020!2.52e-14!34;UBERON:0007811!3.08e-14!86;UBERON:0003080!7.84e-14!40;UBERON:0002780!3.85e-13!39;UBERON:0001890!3.85e-13!39;UBERON:0006240!3.85e-13!39;UBERON:0000153!5.34e-12!94;UBERON:0004121!1.06e-11!102;UBERON:0000924!1.06e-11!102;UBERON:0006601!1.06e-11!102;UBERON:0002791!5.73e-11!29;UBERON:0003528!5.73e-11!29;UBERON:0001893!5.73e-11!29;UBERON:0002021!4.24e-10!10;UBERON:0000411!4.24e-10!10;UBERON:0001950!4.24e-10!10;UBERON:0002420!2.98e-07!8;UBERON:0007245!2.98e-07!8;UBERON:0010009!2.98e-07!8;UBERON:0010011!2.98e-07!8;UBERON:0000454!2.98e-07!8;UBERON:0002619!5.22e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.52e-40,54;UBERON:0001049,3.24e-38,52;UBERON:0005068,3.24e-38,52;UBERON:0006241,3.24e-38,52;UBERON:0007135,3.24e-38,52;UBERON:0002020,1.02e-34,34;UBERON:0001017,4.20e-30,73;UBERON:0002346,5.97e-30,64;UBERON:0003075,5.97e-30,64;UBERON:0007284,5.97e-30,64;UBERON:0002616,1.44e-29,46;UBERON:0001016,3.86e-29,75;UBERON:0003080,5.48e-29,40;UBERON:0000955,7.96e-29,47;UBERON:0006238,7.96e-29,47;UBERON:0003528,9.04e-28,29;UBERON:0002791,9.04e-28,29;UBERON:0001893,9.04e-28,29;UBERON:0002021,2.12e-27,10;UBERON:0000411,2.12e-27,10;UBERON:0001950,2.12e-27,10;UBERON:0002780,4.40e-27,39;UBERON:0001890,4.40e-27,39;UBERON:0006240,4.40e-27,39;UBERON:0010371,1.57e-25,73;UBERON:0003056,9.46e-23,49;UBERON:0004121,1.01e-21,95;UBERON:0000924,1.01e-21,95;UBERON:0006601,1.01e-21,95;UBERON:0010314,5.00e-19,92;UBERON:0002619,2.07e-18,17;UBERON:0000956,2.37e-17,21;UBERON:0001869,2.37e-17,21;UBERON:0000203,2.37e-17,21;UBERON:0000025,3.39e-14,114;UBERON:0004111,7.20e-13,122;UBERON:0002420,8.53e-12,8;UBERON:0007245,8.53e-12,8;UBERON:0010009,8.53e-12,8;UBERON:0010011,8.53e-12,8;UBERON:0000454,8.53e-12,8;UBERON:0002950,4.23e-11,4;UBERON:0001891,4.23e-11,4;UBERON:0009616,4.23e-11,4;UBERON:0010286,4.23e-11,4;UBERON:0002240,4.86e-10,6;UBERON:0005174,4.86e-10,6;UBERON:0001137,4.86e-10,6;UBERON:0003076,3.11e-09,12;UBERON:0003057,3.11e-09,12;UBERON:0002038,6.44e-09,3;UBERON:0009663,6.44e-09,3;UBERON:0009661,6.44e-09,3;UBERON:0000125,6.44e-09,3;UBERON:0002308,6.44e-09,3;UBERON:0001948,4.43e-08,5;UBERON:0002315,4.43e-08,5;UBERON:0011216,2.01e-07,194;UBERON:0000483,3.35e-07,174;UBERON:0000119,4.74e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,1.99955689082663,1.76694832761291,0.244981598429908,0,0,0,3.44755812830007,5.37622866396852,3.42904348098504,3.93396867490361,1.04182674111352,3.62937898701795,2.8138130501584,3.36156145108982,0.883885756421003,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,2.30391377494801,0,0,0,0,1.9472783122627,0.915001205637253,0.376963056338593,3.65031072403781,3.06858548796397,3.1168206683934,2.43361894601636,0.305518091550949,0,0,0.210441855886474,0,0,0.540186389416048,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.3131894342054,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.64096361229084,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0.35613120733451,0.488660878060728,0,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,1.81766864738753,1.06949213515416,0.316036757935816,0,0,1.02131881726136,0,0,0,0.354680467284547,0.535106452806212,0.822745103010605,0.913394847343798,0,0.21183207086382,0,0,0,0.120625849856312,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.496375471371293,0.583353565032143,0.387479470433193,0.844780627453891,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0,0.504832249740738,0.304827226619999,0.100826185136841,0.38983152295901,0.384847366561318,0.584384510907845,0,0,0,0.335769232728157,0.19318959403219,0,0,0.214368379079066,0,2.25900737046827,3.68260189205742,1.71868654031819,4.29632955859219,3.42541259885321,9.82012066606611,4.72515750162264,4.05289082901798,5.89085131679466,7.24864436452548,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Syt13 | |||
}} |
Revision as of 00:55, 14 September 2013
Short description: | p4@Syt13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Syt13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 21bp_to_NM_030725, uc008lfn.1_5end |
EntrezGene: | Syt13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.45e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-14 | 23 |
neuron | 3.01e-09 | 33 |
neuronal stem cell | 3.01e-09 | 33 |
neuroblast | 3.01e-09 | 33 |
electrically signaling cell | 3.01e-09 | 33 |
neuron of the substantia nigra | 6.44e-09 | 3 |
striatum neuron | 1.19e-08 | 3 |
electrically responsive cell | 1.86e-07 | 39 |
electrically active cell | 1.86e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.