FFCP PHASE1:Mm9::chr15:91991841..91991862,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=237|UniProt=P12960|association_with_transcript=53bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end|description=CAGE_peak_11_at_Cntn1_5end|id=chr15:91991841..91991862,+|ontology_enrichment_celltype=CL:0000117!3.64e-17!23;CL:0000337!3.64e-17!23;CL:0000540!4.36e-10!33;CL:0000047!4.36e-10!33;CL:0000031!4.36e-10!33;CL:0000404!4.36e-10!33;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002319!3.65e-08!43;CL:0000393!1.17e-07!39;CL:0000211!1.17e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.04e-12,23;CL:0000337,5.04e-12,23;CL:0002610,6.14e-09,3;CL:0002612,6.52e-09,3;CL:0002614,2.67e-08,3;CL:0000540,1.10e-07,33;CL:0000047,1.10e-07,33;CL:0000031,1.10e-07,33;CL:0000404,1.10e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.28e-29!52;UBERON:0005068!5.28e-29!52;UBERON:0006241!5.28e-29!52;UBERON:0007135!5.28e-29!52;UBERON:0001017!4.13e-28!73;UBERON:0005743!4.13e-28!73;UBERON:0002020!1.76e-27!34;UBERON:0000073!5.89e-27!75;UBERON:0001016!5.89e-27!75;UBERON:0000955!1.92e-26!50;UBERON:0006238!1.92e-26!50;UBERON:0002616!2.05e-25!49;UBERON:0000033!6.93e-22!63;UBERON:0002791!2.78e-21!29;UBERON:0003528!2.78e-21!29;UBERON:0001893!2.78e-21!29;UBERON:0002346!8.23e-20!71;UBERON:0003075!8.23e-20!71;UBERON:0007284!8.23e-20!71;UBERON:0003080!2.80e-19!40;UBERON:0004121!1.59e-18!102;UBERON:0000924!1.59e-18!102;UBERON:0006601!1.59e-18!102;UBERON:0002780!2.97e-18!39;UBERON:0001890!2.97e-18!39;UBERON:0006240!2.97e-18!39;UBERON:0003056!4.29e-16!49;UBERON:0000956!1.22e-13!21;UBERON:0001869!1.22e-13!21;UBERON:0000203!1.22e-13!21;UBERON:0002021!5.45e-13!10;UBERON:0000411!5.45e-13!10;UBERON:0001950!5.45e-13!10;UBERON:0007811!9.95e-13!86;UBERON:0002619!2.09e-12!17;UBERON:0000153!1.18e-10!94;UBERON:0003076!2.17e-10!12;UBERON:0003057!2.17e-10!12;UBERON:0002420!4.95e-09!8;UBERON:0007245!4.95e-09!8;UBERON:0010009!4.95e-09!8;UBERON:0010011!4.95e-09!8;UBERON:0000454!4.95e-09!8;UBERON:0002240!7.01e-09!6;UBERON:0005174!7.01e-09!6;UBERON:0001137!7.01e-09!6;UBERON:0002298!2.71e-08!6;UBERON:0001948!1.26e-07!5;UBERON:0002315!1.26e-07!5;UBERON:0000025!2.98e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.65e-43,54;UBERON:0001049,1.81e-38,52;UBERON:0005068,1.81e-38,52;UBERON:0006241,1.81e-38,52;UBERON:0007135,1.81e-38,52;UBERON:0001017,1.31e-34,73;UBERON:0001016,1.65e-33,75;UBERON:0002020,9.07e-32,34;UBERON:0002346,4.49e-30,64;UBERON:0003075,4.49e-30,64;UBERON:0007284,4.49e-30,64;UBERON:0000955,5.78e-28,47;UBERON:0006238,5.78e-28,47;UBERON:0002616,2.81e-26,46;UBERON:0010371,1.38e-25,73;UBERON:0004121,4.66e-25,95;UBERON:0000924,4.66e-25,95;UBERON:0006601,4.66e-25,95;UBERON:0002021,2.85e-24,10;UBERON:0000411,2.85e-24,10;UBERON:0001950,2.85e-24,10;UBERON:0003528,2.49e-21,29;UBERON:0002791,2.49e-21,29;UBERON:0001893,2.49e-21,29;UBERON:0003080,7.36e-21,40;UBERON:0003076,4.90e-20,12;UBERON:0003057,4.90e-20,12;UBERON:0002619,3.01e-19,17;UBERON:0002780,3.33e-19,39;UBERON:0001890,3.33e-19,39;UBERON:0006240,3.33e-19,39;UBERON:0010314,5.51e-19,92;UBERON:0000956,1.09e-17,21;UBERON:0001869,1.09e-17,21;UBERON:0000203,1.09e-17,21;UBERON:0003056,3.50e-16,49;UBERON:0002240,4.26e-16,6;UBERON:0005174,4.26e-16,6;UBERON:0001137,4.26e-16,6;UBERON:0000025,4.40e-14,114;UBERON:0001948,1.30e-13,5;UBERON:0002315,1.30e-13,5;UBERON:0004111,9.75e-13,122;UBERON:0002950,1.88e-10,4;UBERON:0001891,1.88e-10,4;UBERON:0009616,1.88e-10,4;UBERON:0010286,1.88e-10,4;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0002257,6.52e-09,3;UBERON:0011216,9.00e-09,194;UBERON:0002038,2.67e-08,3;UBERON:0009663,2.67e-08,3;UBERON:0009661,2.67e-08,3;UBERON:0000125,2.67e-08,3;UBERON:0002308,2.67e-08,3;UBERON:0000483,5.33e-07,174;UBERON:0000119,7.59e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0.135005938331691,0.210324961351382,3.42781181284564,3.53389665522582,0.122490799214954,0.191690942036473,0,4.40463523997555,5.10749352340751,3.07213066512487,0.659431438650969,0.365950574409639,0.52091337055676,3.07101298901519,2.25105044012672,3.97275444219706,6.48182888042069,8.68467252874528,2.42319279572891,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.04723353406728,0,0,0,0,2.99581278809645,0.457500602818626,1.00523481690292,1.56441888173049,3.06858548796397,3.53239675751252,3.24482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.94405927989778,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1645490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| ||
|EntrezGene=12805 | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|UniProt=P12960 | |||
|association_with_transcript=53bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end | |||
|description=CAGE_peak_11_at_Cntn1_5end | |||
|id=chr15:91991841..91991862,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.64e-17!23;CL:0000337!3.64e-17!23;CL:0000540!4.36e-10!33;CL:0000047!4.36e-10!33;CL:0000031!4.36e-10!33;CL:0000404!4.36e-10!33;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002319!3.65e-08!43;CL:0000393!1.17e-07!39;CL:0000211!1.17e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.04e-12,23;CL:0000337,5.04e-12,23;CL:0002610,6.14e-09,3;CL:0002612,6.52e-09,3;CL:0002614,2.67e-08,3;CL:0000540,1.10e-07,33;CL:0000047,1.10e-07,33;CL:0000031,1.10e-07,33;CL:0000404,1.10e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.28e-29!52;UBERON:0005068!5.28e-29!52;UBERON:0006241!5.28e-29!52;UBERON:0007135!5.28e-29!52;UBERON:0001017!4.13e-28!73;UBERON:0005743!4.13e-28!73;UBERON:0002020!1.76e-27!34;UBERON:0000073!5.89e-27!75;UBERON:0001016!5.89e-27!75;UBERON:0000955!1.92e-26!50;UBERON:0006238!1.92e-26!50;UBERON:0002616!2.05e-25!49;UBERON:0000033!6.93e-22!63;UBERON:0002791!2.78e-21!29;UBERON:0003528!2.78e-21!29;UBERON:0001893!2.78e-21!29;UBERON:0002346!8.23e-20!71;UBERON:0003075!8.23e-20!71;UBERON:0007284!8.23e-20!71;UBERON:0003080!2.80e-19!40;UBERON:0004121!1.59e-18!102;UBERON:0000924!1.59e-18!102;UBERON:0006601!1.59e-18!102;UBERON:0002780!2.97e-18!39;UBERON:0001890!2.97e-18!39;UBERON:0006240!2.97e-18!39;UBERON:0003056!4.29e-16!49;UBERON:0000956!1.22e-13!21;UBERON:0001869!1.22e-13!21;UBERON:0000203!1.22e-13!21;UBERON:0002021!5.45e-13!10;UBERON:0000411!5.45e-13!10;UBERON:0001950!5.45e-13!10;UBERON:0007811!9.95e-13!86;UBERON:0002619!2.09e-12!17;UBERON:0000153!1.18e-10!94;UBERON:0003076!2.17e-10!12;UBERON:0003057!2.17e-10!12;UBERON:0002420!4.95e-09!8;UBERON:0007245!4.95e-09!8;UBERON:0010009!4.95e-09!8;UBERON:0010011!4.95e-09!8;UBERON:0000454!4.95e-09!8;UBERON:0002240!7.01e-09!6;UBERON:0005174!7.01e-09!6;UBERON:0001137!7.01e-09!6;UBERON:0002298!2.71e-08!6;UBERON:0001948!1.26e-07!5;UBERON:0002315!1.26e-07!5;UBERON:0000025!2.98e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.65e-43,54;UBERON:0001049,1.81e-38,52;UBERON:0005068,1.81e-38,52;UBERON:0006241,1.81e-38,52;UBERON:0007135,1.81e-38,52;UBERON:0001017,1.31e-34,73;UBERON:0001016,1.65e-33,75;UBERON:0002020,9.07e-32,34;UBERON:0002346,4.49e-30,64;UBERON:0003075,4.49e-30,64;UBERON:0007284,4.49e-30,64;UBERON:0000955,5.78e-28,47;UBERON:0006238,5.78e-28,47;UBERON:0002616,2.81e-26,46;UBERON:0010371,1.38e-25,73;UBERON:0004121,4.66e-25,95;UBERON:0000924,4.66e-25,95;UBERON:0006601,4.66e-25,95;UBERON:0002021,2.85e-24,10;UBERON:0000411,2.85e-24,10;UBERON:0001950,2.85e-24,10;UBERON:0003528,2.49e-21,29;UBERON:0002791,2.49e-21,29;UBERON:0001893,2.49e-21,29;UBERON:0003080,7.36e-21,40;UBERON:0003076,4.90e-20,12;UBERON:0003057,4.90e-20,12;UBERON:0002619,3.01e-19,17;UBERON:0002780,3.33e-19,39;UBERON:0001890,3.33e-19,39;UBERON:0006240,3.33e-19,39;UBERON:0010314,5.51e-19,92;UBERON:0000956,1.09e-17,21;UBERON:0001869,1.09e-17,21;UBERON:0000203,1.09e-17,21;UBERON:0003056,3.50e-16,49;UBERON:0002240,4.26e-16,6;UBERON:0005174,4.26e-16,6;UBERON:0001137,4.26e-16,6;UBERON:0000025,4.40e-14,114;UBERON:0001948,1.30e-13,5;UBERON:0002315,1.30e-13,5;UBERON:0004111,9.75e-13,122;UBERON:0002950,1.88e-10,4;UBERON:0001891,1.88e-10,4;UBERON:0009616,1.88e-10,4;UBERON:0010286,1.88e-10,4;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0002257,6.52e-09,3;UBERON:0011216,9.00e-09,194;UBERON:0002038,2.67e-08,3;UBERON:0009663,2.67e-08,3;UBERON:0009661,2.67e-08,3;UBERON:0000125,2.67e-08,3;UBERON:0002308,2.67e-08,3;UBERON:0000483,5.33e-07,174;UBERON:0000119,7.59e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0.135005938331691,0.210324961351382,3.42781181284564,3.53389665522582,0.122490799214954,0.191690942036473,0,4.40463523997555,5.10749352340751,3.07213066512487,0.659431438650969,0.365950574409639,0.52091337055676,3.07101298901519,2.25105044012672,3.97275444219706,6.48182888042069,8.68467252874528,2.42319279572891,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.04723353406728,0,0,0,0,2.99581278809645,0.457500602818626,1.00523481690292,1.56441888173049,3.06858548796397,3.53239675751252,3.24482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.94405927989778,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,10.3121192419091,3.95262319390481,2.05524755931193,6.0431511791176,1.35004500046361,1.35096360967266,3.17199686288943,3.10656187051092,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,1.01078884705519,0,0.188626341386076,0.37456602987953,0.576226371643824,0.459483751644906,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.715308569841963,0.436039249896986,0.376437521661322,0,0,0,0.543216455383447,0,0.118635018124174,0,0,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p11@Cntn1 | |||
}} |
Revision as of 11:38, 13 September 2013
Short description: | p11@Cntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Cntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | 53bp_to_ENSMUST00000068378, NM_001159647, uc007xil.2_5end |
EntrezGene: | Cntn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.04e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.04e-12 | 23 |
raphe nuclei neuron | 6.14e-09 | 3 |
neuron of the ventral spinal cord | 6.52e-09 | 3 |
neuron of the substantia nigra | 2.67e-08 | 3 |
neuron | 1.10e-07 | 33 |
neuronal stem cell | 1.10e-07 | 33 |
neuroblast | 1.10e-07 | 33 |
electrically signaling cell | 1.10e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.