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FFCP PHASE1:Mm9::chr9:58097509..58097598,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18854|HGNC=|MCL_coexpression_id=3714|UniProt=Q60953,D3Z2V0,D3Z3A6,D6RII9,D3YXR5,Q8BSJ6|association_with_transcript=0bp_to_ENSMUST00000041209,ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000124982,ENSMUST00000135310,ENSMUST00000148301,ENSMUST00000153820,NM_008884,NM_178087,uc009pwn.1,uc009pwo.1,uc009pwp.2,uc009pwq.2,uc009pwr.1_5end|description=CAGE_peak_1_at_Pml_5end|id=chr9:58097509..58097598,-|ontology_enrichment_celltype=CL:0000839!8.00e-07!13|ontology_enrichment_celltype_v019_2=CL:0000839,8.00e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.42e-15!193;UBERON:0004120!3.42e-15!193;UBERON:0006603!3.42e-15!193;UBERON:0003104!3.91e-13!131;UBERON:0009142!3.91e-13!131;UBERON:0001007!4.67e-12!128;UBERON:0001555!4.67e-12!128;UBERON:0007026!4.67e-12!128;UBERON:0004921!8.36e-12!126;UBERON:0004185!8.36e-12!126;UBERON:0004119!1.48e-11!130;UBERON:0000925!1.48e-11!130;UBERON:0006595!1.48e-11!130;UBERON:0002405!1.04e-10!70;UBERON:0001041!1.84e-10!92;UBERON:0000077!6.29e-10!97;UBERON:0000466!7.98e-09!79;UBERON:0005172!4.21e-08!49;UBERON:0005173!4.21e-08!49;UBERON:0002417!4.21e-08!49;UBERON:0000916!4.21e-08!49;UBERON:0009569!1.10e-07!66;UBERON:0005057!1.85e-07!51;UBERON:0005177!2.55e-07!85;UBERON:0002193!2.66e-07!48;UBERON:0002075!5.04e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.34e-10,79;UBERON:0002100,5.99e-10,90;UBERON:0001007,2.84e-09,116;UBERON:0001555,2.84e-09,116;UBERON:0007026,2.84e-09,116;UBERON:0004921,4.72e-09,114;UBERON:0004119,7.90e-09,118;UBERON:0000925,7.90e-09,118;UBERON:0006595,7.90e-09,118;UBERON:0005172,4.21e-08,49;UBERON:0005173,4.21e-08,49;UBERON:0002417,4.21e-08,49;UBERON:0000916,4.21e-08,49;UBERON:0001041,7.25e-08,80;UBERON:0009569,1.10e-07,66;UBERON:0002193,2.66e-07,48;UBERON:0002405,2.66e-07,48;UBERON:0002075,5.04e-07,19|phase1_expression=11.2104192973356,36.2934423944936,32.3049459966571,19.0552453123303,24.0429950374247,17.1236857350128,19.8570744506197,27.3741445696142,6.47628121897667,5.61754863172784,5.99262888789267,8.13676021752431,30.9873321175482,30.3348796393921,67.9543914103952,76.1307005385746,67.1579403003021,127.288983722049,124.362791280405,84.877930359606,18.9646537036886,22.1418821177974,16.194386926614,30.0785754851605,23.6291559499185,19.5238867799107,18.0920038386811,28.8731451799091,20.5225293012884,27.2192540140725,14.4124831925948,68.5833127336402,76.2680336604867,31.6963362030877,18.1976520443303,12.8000676926039,13.4751775133164,15.0671387065287,8.5946887897618,9.94695113550217,11.7646297606203,19.1252735788365,16.5073520030592,53.6320444575959,49.4719424351231,44.2347672709652,53.9850027600147,22.0205407944251,19.552070263368,17.1098311185369,38.6362523686001,24.4379359420452,68.2875206654987,20.3101399763176,33.2732861151039,20.3234954468398,23.2092086350393,25.7836046138721,3.03474691289397,1.05798195854407,3.80298842103708,58.6201040479598,64.9185201161132,26.0970918011606,43.5101199529469,30.5506449426823,29.0612107202853,22.2846617086502,7.46565208621039,7.42532660824299,6.52007380189284,5.42736870367227,6.40518768759679,8.81933754347669,8.81778333367775,11.0306254393203,2.20231761998777,6.76742891851495,5.83704826373725,3.03338461779446,5.48925861614458,3.64639359389732,4.4669279840221,3.37657566019008,7.18151764551008,7.95497180778903,5.97961059356232,4.47358669980721,9.76867893998074,26.072188236841,54.4945238759154,19.7897491705719,1.3599426674155,15.1116893658589,23.3919510281161,22.8493712419641,22.3306628009485,19.0881961287425,14.2882302531578,16.2536204274756,10.4224130634744,17.9657068380045,17.8363667794652,7.11066703153331,10.1750789275271,13.1747130047051,10.1104889002957,21.3523855074642,131.281507009116,32.0635020380021,21.3386951922347,24.6617037432834,26.0595511899346,24.8692356911827,22.694620477191,28.4006496405067,15.8204779349999,28.7752720270624,63.6919597403909,24.7503280419536,45.4933528028411,49.4572758197927,37.2783522436244,16.3957246326466,11.1006754611131,40.617671778166,14.7372603142282,12.5979573508616,14.6130761134024,9.58660092190865,12.8100168789215,5.90575454930463,13.0368240144207,12.5300574091862,8.72709787150152,9.5722345209977,24.0340898686746,39.1881957421793,16.1742565397552,36.40644106836,21.3397526458834,10.8053989083732,17.2859644613135,14.4676625122286,13.6072998302656,12.811372028485,13.2119431629218,18.1092359517311,26.0837271448739,26.8530633838303,26.3926686245923,18.1932457914887,21.9657326888222,22.984642990463,25.1054206417691,27.6657630877706,11.2354109970118,11.5806558201622,7.95657798307659,24.8550927042602,22.045449638223,14.7650890398032,22.7274946161802,21.447301260467,17.2779166433864,17.672579801031,20.1205051049714,13.077718345123,19.0889425899637,18.7150909050169,15.4841426232584,14.9123987173839,23.2723122208514,15.7021509949635,11.565947171027,5.76265829323993,51.5453301454725,35.1719253662514,24.1015723104814,26.47498059209,24.6136851125198,25.2104405779178,20.6811580775729,21.4954957507192,28.471743692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|EntrezGene=18854
|HGNC=
|MCL_coexpression_id=3714
|UniProt=Q60953,D3Z2V0,D3Z3A6,D6RII9,D3YXR5,Q8BSJ6
|association_with_transcript=0bp_to_ENSMUST00000041209,ENSMUST00000085673,ENSMUST00000114136,ENSMUST00000124982,ENSMUST00000135310,ENSMUST00000148301,ENSMUST00000153820,NM_008884,NM_178087,uc009pwn.1,uc009pwo.1,uc009pwp.2,uc009pwq.2,uc009pwr.1_5end
|description=CAGE_peak_1_at_Pml_5end
|id=chr9:58097509..58097598,-
|ontology_enrichment_celltype=CL:0000839!8.00e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000839,8.00e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.42e-15!193;UBERON:0004120!3.42e-15!193;UBERON:0006603!3.42e-15!193;UBERON:0003104!3.91e-13!131;UBERON:0009142!3.91e-13!131;UBERON:0001007!4.67e-12!128;UBERON:0001555!4.67e-12!128;UBERON:0007026!4.67e-12!128;UBERON:0004921!8.36e-12!126;UBERON:0004185!8.36e-12!126;UBERON:0004119!1.48e-11!130;UBERON:0000925!1.48e-11!130;UBERON:0006595!1.48e-11!130;UBERON:0002405!1.04e-10!70;UBERON:0001041!1.84e-10!92;UBERON:0000077!6.29e-10!97;UBERON:0000466!7.98e-09!79;UBERON:0005172!4.21e-08!49;UBERON:0005173!4.21e-08!49;UBERON:0002417!4.21e-08!49;UBERON:0000916!4.21e-08!49;UBERON:0009569!1.10e-07!66;UBERON:0005057!1.85e-07!51;UBERON:0005177!2.55e-07!85;UBERON:0002193!2.66e-07!48;UBERON:0002075!5.04e-07!19
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.34e-10,79;UBERON:0002100,5.99e-10,90;UBERON:0001007,2.84e-09,116;UBERON:0001555,2.84e-09,116;UBERON:0007026,2.84e-09,116;UBERON:0004921,4.72e-09,114;UBERON:0004119,7.90e-09,118;UBERON:0000925,7.90e-09,118;UBERON:0006595,7.90e-09,118;UBERON:0005172,4.21e-08,49;UBERON:0005173,4.21e-08,49;UBERON:0002417,4.21e-08,49;UBERON:0000916,4.21e-08,49;UBERON:0001041,7.25e-08,80;UBERON:0009569,1.10e-07,66;UBERON:0002193,2.66e-07,48;UBERON:0002405,2.66e-07,48;UBERON:0002075,5.04e-07,19
|phase1_expression=11.2104192973356,36.2934423944936,32.3049459966571,19.0552453123303,24.0429950374247,17.1236857350128,19.8570744506197,27.3741445696142,6.47628121897667,5.61754863172784,5.99262888789267,8.13676021752431,30.9873321175482,30.3348796393921,67.9543914103952,76.1307005385746,67.1579403003021,127.288983722049,124.362791280405,84.877930359606,18.9646537036886,22.1418821177974,16.194386926614,30.0785754851605,23.6291559499185,19.5238867799107,18.0920038386811,28.8731451799091,20.5225293012884,27.2192540140725,14.4124831925948,68.5833127336402,76.2680336604867,31.6963362030877,18.1976520443303,12.8000676926039,13.4751775133164,15.0671387065287,8.5946887897618,9.94695113550217,11.7646297606203,19.1252735788365,16.5073520030592,53.6320444575959,49.4719424351231,44.2347672709652,53.9850027600147,22.0205407944251,19.552070263368,17.1098311185369,38.6362523686001,24.4379359420452,68.2875206654987,20.3101399763176,33.2732861151039,20.3234954468398,23.2092086350393,25.7836046138721,3.03474691289397,1.05798195854407,3.80298842103708,58.6201040479598,64.9185201161132,26.0970918011606,43.5101199529469,30.5506449426823,29.0612107202853,22.2846617086502,7.46565208621039,7.42532660824299,6.52007380189284,5.42736870367227,6.40518768759679,8.81933754347669,8.81778333367775,11.0306254393203,2.20231761998777,6.76742891851495,5.83704826373725,3.03338461779446,5.48925861614458,3.64639359389732,4.4669279840221,3.37657566019008,7.18151764551008,7.95497180778903,5.97961059356232,4.47358669980721,9.76867893998074,26.072188236841,54.4945238759154,19.7897491705719,1.3599426674155,15.1116893658589,23.3919510281161,22.8493712419641,22.3306628009485,19.0881961287425,14.2882302531578,16.2536204274756,10.4224130634744,17.9657068380045,17.8363667794652,7.11066703153331,10.1750789275271,13.1747130047051,10.1104889002957,21.3523855074642,131.281507009116,32.0635020380021,21.3386951922347,24.6617037432834,26.0595511899346,24.8692356911827,22.694620477191,28.4006496405067,15.8204779349999,28.7752720270624,63.6919597403909,24.7503280419536,45.4933528028411,49.4572758197927,37.2783522436244,16.3957246326466,11.1006754611131,40.617671778166,14.7372603142282,12.5979573508616,14.6130761134024,9.58660092190865,12.8100168789215,5.90575454930463,13.0368240144207,12.5300574091862,8.72709787150152,9.5722345209977,24.0340898686746,39.1881957421793,16.1742565397552,36.40644106836,21.3397526458834,10.8053989083732,17.2859644613135,14.4676625122286,13.6072998302656,12.811372028485,13.2119431629218,18.1092359517311,26.0837271448739,26.8530633838303,26.3926686245923,18.1932457914887,21.9657326888222,22.984642990463,25.1054206417691,27.6657630877706,11.2354109970118,11.5806558201622,7.95657798307659,24.8550927042602,22.045449638223,14.7650890398032,22.7274946161802,21.447301260467,17.2779166433864,17.672579801031,20.1205051049714,13.077718345123,19.0889425899637,18.7150909050169,15.4841426232584,14.9123987173839,23.2723122208514,15.7021509949635,11.565947171027,5.76265829323993,51.5453301454725,35.1719253662514,24.1015723104814,26.47498059209,24.6136851125198,25.2104405779178,20.6811580775729,21.4954957507192,28.4717436926707,19.2697777027093,27.6468729680296,26.8591237255554,22.8107981929371,38.6492345721315,25.9365659849633,29.4729084416463,26.3638382324784,25.0204242615306,43.9560169125014,27.6965805869627,24.8259183574561,20.479659407973,29.2152801514069,37.6405877347986,33.2837303023715,22.0880923420023,22.2339470315362,46.8834747062224,48.9431897831875,56.4403902085983,62.8866376304359,54.7472152637986,38.193877767213,53.5114815658508,21.5639851610797,29.1035097979366,201.275489138296,36.8419538191818,32.1398803307997,34.3507274008072,32.8297266745099,19.2977408545347,37.1353912234875,14.0223644710159,27.8670109715864,26.8197235524797,30.2750420292168,22.2783322397615,38.5630698235342,19.7084984336377,27.5861502185834,25.4684393096091,30.6153155822375,29.4953966488328,33.5008864819837,23.4331474902049,33.1740824666399,33.1782467129413,31.4729134732183,19.0396354950265,10.5963389391943,7.2671245687166,19.6721934452011,14.1383719234449,17.6684602873104,21.0836921920185,21.5423397732799,32.2607877235945,23.3938607786514,18.9661275628518,40.8858808691643,30.6868650806877,32.4135977916149,15.1021018718249,36.9044221541498,27.6001685684246,21.3381916753185,34.9736660701775,39.8235415019888,37.8737792401771,31.7439734812989,37.5324108714237,38.6845479673812,48.5747533751405,26.3596859031586,30.900367005588,31.3717692978555,24.6508671189936,18.9753495434998,33.0033738394198,26.8947288545492,18.006109403131,16.0404767890616,16.9326257674958,22.1675292052842,19.0854634834215,22.0495687606842,17.3545020995322,18.0697215209057,17.7938939525609,18.7449138346718,20.281009111802,17.5996225098537,19.0588842772972,16.9508728484454,15.5933854757808,34.6862195589522,10.3838169125885,95.8585641275954,28.8941615148511,61.2993885593746,93.4307546743267,158.291915700947,97.6882799591852,27.026570369023,35.2677659855618,27.3635948132759,38.1868247206045,24.3578715057474,30.904559003281,21.3850574827167,20.6997413054324,24.8933322670642,21.848024114341,24.7960367176008,20.9404753587224,28.6449090974862,47.2217877946063,2.25477175473676,42.9112487146219,29.2861528109063,26.0564592381024,27.381882577279,27.8777607059784,31.9211689116451,23.8274024264429,16.7774951081137,7.9722759872582,8.06484017522023,44.8735791292013,28.7869805712033,30.7105761922833,34.2990972661379,45.6518073952078,42.1204472136282,35.3374621588708,32.7870750327561,40.0836806294146,38.1796101341549,34.5833815019363,44.5382514980669,34.155203782317,38.3356239155546,21.0859256762147,15.0950448294364,12.4702260687171,10.9125000636651,35.9332644899874,30.7799259739938,32.9672923681077,21.6512062869857,30.0943262421218,16.3778034358949,9.66682996665071,17.7597609166213,14.2638141345261,17.1270629942661,18.8848474347425,6.75022500231806,18.0128481289688,15.406841905463,17.0860902878101,18.9930846079043,20.7492934168536,17.2440941811676,28.4434858969904,19.9132504496583,13.604419625301,20.224452229947,21.427645952845,23.7480215097943,16.172621552883,19.7713853914387,19.9943921869241,22.8485278226513,21.4484260556312,20.044978665509,23.3383908728706,19.0050294549563,18.5192851645157,22.2526386433786,18.2526660966653,17.8292011240416,20.5871935144832,19.7902037656276,22.0926553281139,20.6099543109574,20.7305789334607,17.9269413415317,18.6779495120868,17.654534799962,12.3451299764702,19.2188729361162,17.829311309977,26.6000178060298,18.9022946246879,20.6410073749821,18.7357933453459,20.1181183263051,21.4871054048298,13.9640482410256,24.9268303605053,16.4626163290499
|short_description=p1@Pml
}}

Revision as of 18:22, 14 September 2013

Short description:p1@Pml
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pml_5end
Coexpression cluster:MCL_coexpression_mm9:3714
Association with transcript: 0bp_to_ENSMUST00000041209, ENSMUST00000085673, ENSMUST00000114136, ENSMUST00000124982, ENSMUST00000135310, ENSMUST00000148301, ENSMUST00000153820, NM_008884, NM_178087, uc009pwn.1, uc009pwo.1, uc009pwp.2, uc009pwq.2, uc009pwr.1_5end
EntrezGene:Pml
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pml

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I632.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.06
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.86
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E430.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E830.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A167.95
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A376.13
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A567.16
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2127.29
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4124.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A684.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D223.63
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I228.87
Ileum epithelium, pool1.CNhs13199.10252-104B920.52
Ileum epithelium, pool2.CNhs13232.10253-104C127.22
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I368.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G676.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D853.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D949.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B344.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B753.99
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.02
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.55
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C438.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A268.29
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.27
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C658.62
Mouse Meningeal cells, donor3.CNhs12109.11639-122D164.92
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C726.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E743.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D230.55
Mouse Microglia, donor1.CNhs12629.11718-123C829.06
Mouse Microglia, donor2.CNhs12634.11736-123E822.28
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D99.77
Mouse Schwann, donor2.CNhs12573.11746-123F926.07
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G354.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.11
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A722.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.35
accessory axillary lymph node, adult.CNhs10475.1063-29H9131.28
adrenal gland, adult.CNhs10508.49-24D732.06
adrenal gland, embryo E14.CNhs11038.406-44C521.34
adrenal gland, embryo E16.CNhs11004.1254-43D624.66
adrenal gland, embryo E17.CNhs11043.1263-45I126.06
adrenal gland, embryo E18.CNhs11026.1262-18F524.87
adrenal gland, neonate N00.CNhs11191.1311-23C122.69
adrenal gland, neonate N25.CNhs11223.1377-27I328.40
amnion, adult pregnant day17.5.CNhs10488.583-22A815.82
aorta, adult.CNhs10498.46-23H128.78
bone (os femoris), adult.CNhs10483.56-12G263.69
bone (os femoris), neonate N02.CNhs11227.1985-43F524.75
bone (os femoris), neonate N16.CNhs11225.1525-43A645.49
bone (os femoris), neonate N20.CNhs11195.1350-25C349.46
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B216.40
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H740.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.74
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.61
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.03
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A239.19
epididymis, adult.CNhs10490.58-23B216.17
eyeball, adult.CNhs10484.31-12G436.41
eyeball, embryo E12.CNhs11016.345-16C621.34
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D414.47
eyeball, neonate N00.CNhs11207.633-15C613.61
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G813.21
eyeball, neonate N16.CNhs11188.777-19A218.11
forelimb, embryo E11.CNhs10596.335-25E226.08
forelimb, embryo E12.CNhs10600.359-14H226.85
forelimb, embryo E13.CNhs10589.384-1E226.39
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E721.97
forelimb, embryo E17.CNhs10598.1517-43C422.98
forelimb, embryo E18.CNhs11008.1520-43B525.11
gonad, embryo E13.CNhs11044.1564-45I627.67
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E924.86
heart, embryo E12.CNhs11015.353-12F522.05
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D422.73
heart, embryo E15.CNhs11017.431-16C821.45
heart, embryo E16.CNhs11021.457-17C617.28
heart, embryo E17.CNhs11025.479-18E517.67
heart, embryo E18.CNhs11030.1283-20G320.12
heart, neonate N00.CNhs11213.639-21E313.08
heart, neonate N03.CNhs11221.1349-25I219.09
heart, neonate N10.CNhs11118.749-24G118.72
heart, neonate N16.CNhs11209.782-15G115.48
heart, neonate N20.CNhs11127.821-26I614.91
heart, neonate N25.CNhs11196.1351-25D323.27
heart, neonate N30.CNhs11202.1390-42D215.70
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I351.55
intestine, adult.CNhs10496.178-9A335.17
intestine, embryo E12.CNhs11019.1251-16I524.10
intestine, embryo E13.CNhs11010.381-16D526.47
intestine, embryo E15.CNhs10602.976-16D824.61
intestine, embryo E16.CNhs10585.463-22H425.21
intestine, embryo E17.CNhs10582.482-18D320.68
intestine, embryo E18.CNhs10526.1289-20F721.50
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E919.27
intestine, neonate N06.CNhs11102.688-20B827.65
intestine, neonate N07.CNhs11095.720-20F226.86
intestine, neonate N10.CNhs11098.755-23A522.81
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E325.94
intestine, neonate N30.CNhs11131.1384-42G129.47
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F825.02
kidney, embryo E16.CNhs10584.464-22A543.96
kidney, embryo E17.CNhs11028.483-18I227.70
kidney, embryo E18.CNhs11001.1288-20C724.83
kidney, neonate N00.CNhs11214.646-21G720.48
kidney, neonate N10.CNhs11206.758-6D529.22
kidney, neonate N20.CNhs11113.832-19I137.64
kidney, neonate N25.CNhs11122.1353-25F333.28
kidney, neonate N30.CNhs11203.1385-42H122.09
liver, adult pregnant day01.CNhs10466.508-5B222.23
liver, embryo E12.CNhs10601.355-15F846.88
liver, embryo E13.CNhs10524.378-3H648.94
liver, embryo E14.CNhs10594.409-16E156.44
liver, embryo E15.CNhs10520.433-16D762.89
liver, embryo E16.CNhs10523.462-17F554.75
liver, embryo E17.CNhs10510.481-18A338.19
liver, embryo E18.CNhs10579.499-43G453.51
liver, neonate N00.CNhs11117.641-24F421.56
liver, neonate N03.CNhs11123.1345-25G229.10
liver, neonate N06.CNhs11101.684-20A8201.28
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B932.14
liver, neonate N20.CNhs11220.823-25A334.35
liver, neonate N25.CNhs11198.1368-26H132.83
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B137.14
lung, embryo E12.CNhs10522.354-16G214.02
lung, embryo E14.CNhs10604.404-26F827.87
lung, embryo E15.CNhs11020.432-17C526.82
lung, embryo E16.CNhs10998.458-17B630.28
lung, embryo E17.CNhs10605.480-44A622.28
lung, embryo E18.CNhs10583.1287-20I638.56
lung, neonate N00.CNhs11224.640-42C619.71
lung, neonate N06.CNhs11212.683-20E527.59
lung, neonate N07.CNhs11111.715-19A325.47
lung, neonate N10.CNhs11219.750-23E630.62
lung, neonate N20.CNhs11109.822-18A429.50
lung, neonate N25.CNhs11119.1359-25C733.50
lung, neonate N30.CNhs11133.1394-42H223.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.18
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.39
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.97
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D440.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D632.41
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I736.90
ovary, embryo E18.CNhs11040.505-44H727.60
ovary, neonate N00.CNhs11217.1299-22I421.34
oviduct, adult pregnant day01.CNhs10500.988-6G634.97
pancreas, adult.CNhs10486.34-16E439.82
pancreas, embryo E14.CNhs11012.405-44F437.87
pancreas, embryo E15.CNhs11042.1556-45F231.74
pancreas, embryo E16.CNhs11003.460-26E537.53
pancreas, embryo E17.CNhs10599.1558-45G338.68
pancreas, embryo E18.CNhs10580.1535-43I748.57
pancreas, neonate N00.CNhs11105.645-26G926.36
pancreas, neonate N01.CNhs11138.1531-43D730.90
pancreas, neonate N02.CNhs11139.1539-43D831.37
pancreas, neonate N16.CNhs11136.787-43B624.65
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G826.89
pituitary gland, embryo E12.CNhs11018.346-16E618.01
pituitary gland, embryo E13.CNhs11009.370-44C716.04
pituitary gland, embryo E14.CNhs11037.398-44A516.93
pituitary gland, embryo E15.CNhs10592.427-16B922.17
pituitary gland, embryo E16.CNhs11036.449-43F619.09
pituitary gland, embryo E17.CNhs11039.1265-44F522.05
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I718.07
placenta, adult pregnant day17.CNhs10464.577-18G317.79
prostate, adult.CNhs10470.859-1F818.74
skin, adult.CNhs10492.30-1C320.28
skin, neonate N00.CNhs11124.650-25G417.60
skin, neonate N03.CNhs11215.662-22H319.06
skin, neonate N06.CNhs11097.693-20I516.95
skin, neonate N10.CNhs11108.762-6C415.59
small intestine, neonate N16.CNhs11114.790-21I134.69
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G295.86
spleen, embryo E16.CNhs11035.461-43C128.89
spleen, embryo E18.CNhs11011.1271-21F261.30
spleen, neonate N10.CNhs11116.752-24D193.43
spleen, neonate N20.CNhs11112.824-19H1158.29
spleen, neonate N25.CNhs11099.1354-25G397.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C935.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.36
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E324.36
stomach, embryo E15.CNhs10603.1252-16G830.90
stomach, embryo E16.CNhs11022.459-17D421.39
stomach, embryo E17.CNhs11006.1035-18D520.70
stomach, embryo E18.CNhs10999.1286-20C624.89
stomach, neonate N03.CNhs11193.1340-24B821.85
stomach, neonate N07.CNhs11210.718-18A924.80
stomach, neonate N25.CNhs11104.1355-25E420.94
stomach, neonate N30.CNhs11134.1386-42I128.64
submandibular gland, adult.CNhs10469.59-29C147.22
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F542.91
testis, embryo E15.CNhs11034.443-27C529.29
testis, embryo E16.CNhs11033.470-26G526.06
testis, embryo E17.CNhs11029.486-18I527.38
testis, embryo E18.CNhs11027.503-18G527.88
testis, neonate N00.CNhs11189.1300-22B731.92
testis, neonate N07.CNhs11222.726-26I423.83
testis, neonate N10.CNhs11204.763-44D916.78
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B544.87
thymus, embryo E14.CNhs11041.402-44I428.79
thymus, embryo E15.CNhs11005.430-45I230.71
thymus, embryo E16.CNhs11002.456-26C534.30
thymus, embryo E17.CNhs10581.478-18C145.65
thymus, embryo E18.CNhs10595.1273-19G442.12
thymus, neonate N02.CNhs11181.1541-43F835.34
thymus, neonate N03.CNhs11137.2104-43C732.79
thymus, neonate N06.CNhs11197.681-26C440.08
thymus, neonate N07.CNhs11211.713-19D338.18
thymus, neonate N10.CNhs11194.748-24E434.58
thymus, neonate N20.CNhs11186.820-7A244.54
thymus, neonate N25.CNhs11125.1362-25G734.16
thymus, neonate N30.CNhs11132.1393-42G238.34
tongue, adult.CNhs10499.32-1B421.09
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.47
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.91
urinary bladder, adult.CNhs10481.879-12E435.93
uterus, adult pregnant day19.CNhs10497.590-15F530.78
uterus, adult.CNhs10509.92-27E532.97
vagina, adult.CNhs10502.89-27D521.65
vesicular gland, adult.CNhs10491.51-27F830.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I818.99
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H217.24
whole body, embryo E14.5.CNhs10578.420-27D228.44
whole body, embryo E14.CNhs10519.395-14B119.91
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.59
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.73
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.90
whole body, embryo E17.5.CNhs10513.490-9F920.64
whole body, embryo E17.CNhs10517.475-3I518.74
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C221.49
whole body, neonate N01.CNhs10576.659-23C613.96
whole body, neonate N06.CNhs10515.692-21D124.93
whole body, neonate N10.CNhs10518.761-6B416.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
myeloid lineage restricted progenitor cell8.00e-0713

Uber anatomy
Ontology termp-valuen
trunk region element1.34e-1079
trunk5.99e-1090
digestive system2.84e-09116
digestive tract2.84e-09116
primitive gut2.84e-09116
subdivision of digestive tract4.72e-09114
endoderm-derived structure7.90e-09118
endoderm7.90e-09118
presumptive endoderm7.90e-09118
abdomen element4.21e-0849
abdominal segment element4.21e-0849
abdominal segment of trunk4.21e-0849
abdomen4.21e-0849
foregut7.25e-0880
subdivision of trunk1.10e-0766
hemolymphoid system2.66e-0748
immune system2.66e-0748
viscus5.04e-0719







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