FFCP PHASE1:Mm9::chr17:21587220..21587237,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:21587220..21587237,-|id=chr17:21587220..21587237,-|ontology_enrichment_celltype=CL:0000838!1.58e-08!12;CL:0000084!6.77e-08!11;CL:0000827!6.77e-08!11;CL:0000791!1.17e-07!9;CL:0000789!1.17e-07!9;CL:0002420!1.17e-07!9;CL:0002419!1.17e-07!9;CL:0000790!1.17e-07!9;CL:0002031!1.57e-07!25;CL:0000542!2.49e-07!13;CL:0000051!2.49e-07!13;CL:0000624!5.66e-07!8;CL:0000988!8.33e-07!32;CL:0002032!8.33e-07!32;CL:0000037!8.33e-07!32;CL:0000566!8.33e-07!32;CL:0000837!8.33e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,3.85e-28,9;CL:0000789,3.85e-28,9;CL:0002420,3.85e-28,9;CL:0002419,3.85e-28,9;CL:0000790,3.85e-28,9;CL:0000838,1.95e-25,12;CL:0000624,3.74e-25,8;CL:0000542,2.45e-23,13;CL:0000051,2.45e-23,13;CL:0000084,9.64e-23,11;CL:0000827,9.64e-23,11;CL:0000738,7.89e-21,17;CL:0002087,7.89e-21,17;CL:0000893,2.82e-19,6;CL:0002489,2.82e-19,6;CL:0000898,2.82e-19,6;CL:0000809,2.82e-19,6;CL:0000810,2.82e-19,6;CL:0000895,2.82e-19,6;CL:0000808,2.82e-19,6;CL:0000894,2.82e-19,6;CL:0000806,2.82e-19,6;CL:0000807,2.82e-19,6;CL:0000805,2.82e-19,6;CL:0002425,2.82e-19,6;CL:0002436,2.82e-19,6;CL:0002427,2.82e-19,6;CL:0002428,2.82e-19,6;CL:0002429,2.82e-19,6;CL:0002433,2.82e-19,6;CL:0002431,2.82e-19,6;CL:0002432,2.82e-19,6;CL:0002031,3.83e-16,25;CL:0000988,3.48e-14,32;CL:0002032,3.48e-14,32;CL:0000037,3.48e-14,32;CL:0000837,3.48e-14,32;CL:0002320,4.47e-09,46;CL:0000134,4.47e-09,46;CL:0000219,2.36e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.29e-10,3;DOID:4045,1.29e-10,3;DOID:0050686,5.96e-09,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000072,9.87e-10,27;UBERON:0002370,1.33e-09,23;UBERON:0000974,1.33e-09,23;UBERON:0004807,1.33e-09,23;UBERON:0005058,1.33e-09,23;UBERON:0003351,1.33e-09,23;UBERON:0009113,1.33e-09,23;UBERON:0003295,1.33e-09,23;UBERON:0009722,1.33e-09,23;UBERON:0005562,1.33e-09,23;UBERON:0007690,1.33e-09,23;UBERON:0006562,3.87e-09,24;UBERON:0003408,3.87e-09,24;UBERON:0001557,3.87e-09,24;UBERON:0001042,3.87e-09,24;UBERON:0008814,3.87e-09,24;UBERON:0009145,3.87e-09,24;UBERON:0002384,4.47e-09,46;UBERON:0004177,2.64e-07,29;UBERON:0005057,2.64e-07,29|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,1.93684985162364,3.94208422024667,3.04283884218592,2.91070545983358,2.47293692885543,1.71200729931206,1.48614684112296,0,0.809901069559304,0.699561878128147,0.473193248037357,0.959801035240171,0.84877930359606,1.36069264241712,0.297872853602656,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0,1.90509202037889,0,0,0,0.166234645358492,0,3.34825304589526,3.1253413780952,1.57057123192139,6.47054636834116,2.04913645487534,2.91306211818692,0.629484089877886,0.304130793658544,0.550640256485045,0,0,0.219686182734472,0.194429899074283,0,0,1.51004345451963,2.90144856804538,2.68875039313971,0,0,0.515672092277442,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0.153606533256243,0,0.274462930807229,0,0,0,0.45839474333043,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.45673551887624,0.517875767294343,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.988779870937496,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0,0,0.479260498023681,0,0.508280908292259,0.299581278809645,0.457500602818626,0,0.347648640384553,0,0,0.162241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.204109497453984,0.512454881139399,0.374806898238915,0,0,0,0.175951124163949,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0.257347907114715,1.13665399758237,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.439100230582101,0,0.210289948564127,0,0,0.528901133327089,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.493588655687202,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0,0.704070744865506,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,0,1.08781136763742,0.491764273019036,0.275936746304732,0.321101179975584,0.468846746368813,0,0,0,0,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,0,0.2922558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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:21587220..21587237,- | |||
|id=chr17:21587220..21587237,- | |||
|ontology_enrichment_celltype=CL:0000838!1.58e-08!12;CL:0000084!6.77e-08!11;CL:0000827!6.77e-08!11;CL:0000791!1.17e-07!9;CL:0000789!1.17e-07!9;CL:0002420!1.17e-07!9;CL:0002419!1.17e-07!9;CL:0000790!1.17e-07!9;CL:0002031!1.57e-07!25;CL:0000542!2.49e-07!13;CL:0000051!2.49e-07!13;CL:0000624!5.66e-07!8;CL:0000988!8.33e-07!32;CL:0002032!8.33e-07!32;CL:0000037!8.33e-07!32;CL:0000566!8.33e-07!32;CL:0000837!8.33e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.85e-28,9;CL:0000789,3.85e-28,9;CL:0002420,3.85e-28,9;CL:0002419,3.85e-28,9;CL:0000790,3.85e-28,9;CL:0000838,1.95e-25,12;CL:0000624,3.74e-25,8;CL:0000542,2.45e-23,13;CL:0000051,2.45e-23,13;CL:0000084,9.64e-23,11;CL:0000827,9.64e-23,11;CL:0000738,7.89e-21,17;CL:0002087,7.89e-21,17;CL:0000893,2.82e-19,6;CL:0002489,2.82e-19,6;CL:0000898,2.82e-19,6;CL:0000809,2.82e-19,6;CL:0000810,2.82e-19,6;CL:0000895,2.82e-19,6;CL:0000808,2.82e-19,6;CL:0000894,2.82e-19,6;CL:0000806,2.82e-19,6;CL:0000807,2.82e-19,6;CL:0000805,2.82e-19,6;CL:0002425,2.82e-19,6;CL:0002436,2.82e-19,6;CL:0002427,2.82e-19,6;CL:0002428,2.82e-19,6;CL:0002429,2.82e-19,6;CL:0002433,2.82e-19,6;CL:0002431,2.82e-19,6;CL:0002432,2.82e-19,6;CL:0002031,3.83e-16,25;CL:0000988,3.48e-14,32;CL:0002032,3.48e-14,32;CL:0000037,3.48e-14,32;CL:0000837,3.48e-14,32;CL:0002320,4.47e-09,46;CL:0000134,4.47e-09,46;CL:0000219,2.36e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.29e-10,3;DOID:4045,1.29e-10,3;DOID:0050686,5.96e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,9.87e-10,27;UBERON:0002370,1.33e-09,23;UBERON:0000974,1.33e-09,23;UBERON:0004807,1.33e-09,23;UBERON:0005058,1.33e-09,23;UBERON:0003351,1.33e-09,23;UBERON:0009113,1.33e-09,23;UBERON:0003295,1.33e-09,23;UBERON:0009722,1.33e-09,23;UBERON:0005562,1.33e-09,23;UBERON:0007690,1.33e-09,23;UBERON:0006562,3.87e-09,24;UBERON:0003408,3.87e-09,24;UBERON:0001557,3.87e-09,24;UBERON:0001042,3.87e-09,24;UBERON:0008814,3.87e-09,24;UBERON:0009145,3.87e-09,24;UBERON:0002384,4.47e-09,46;UBERON:0004177,2.64e-07,29;UBERON:0005057,2.64e-07,29 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,1.93684985162364,3.94208422024667,3.04283884218592,2.91070545983358,2.47293692885543,1.71200729931206,1.48614684112296,0,0.809901069559304,0.699561878128147,0.473193248037357,0.959801035240171,0.84877930359606,1.36069264241712,0.297872853602656,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0,1.90509202037889,0,0,0,0.166234645358492,0,3.34825304589526,3.1253413780952,1.57057123192139,6.47054636834116,2.04913645487534,2.91306211818692,0.629484089877886,0.304130793658544,0.550640256485045,0,0,0.219686182734472,0.194429899074283,0,0,1.51004345451963,2.90144856804538,2.68875039313971,0,0,0.515672092277442,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0.153606533256243,0,0.274462930807229,0,0,0,0.45839474333043,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.45673551887624,0.517875767294343,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.988779870937496,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,0,0,0.479260498023681,0,0.508280908292259,0.299581278809645,0.457500602818626,0,0.347648640384553,0,0,0.162241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.204109497453984,0.512454881139399,0.374806898238915,0,0,0,0.175951124163949,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0.257347907114715,1.13665399758237,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.439100230582101,0,0.210289948564127,0,0,0.528901133327089,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.610953983535943,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.493588655687202,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0,0.704070744865506,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,0,1.08781136763742,0.491764273019036,0.275936746304732,0.321101179975584,0.468846746368813,0,0,0,0,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0.21183207086382,0,1.15420377059036,0,0.180938774784468,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0.555583582109135,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.388844919875379,0.621339313086926,3.38215763210514,0,0,0.388902376688095,0,0.168956125490778,0,0.2604087696879,0.314578033277133,1.93267296660805,1.15212002503146,0.316011120628178,0.608175645870493,0.102710957164827,0,0.179026695667481,0.79472541912506,0.240390899039938,0.147689527174577,0.807731599585181,0.457240839929999,1.10908803650525,0.682205165178267,1.25075394132428,1.28564592399726,0.226730383615211,0.221985953374065,0.269141569828427,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0.62272408550506,0.399024873401031,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr17:21587220..21587237,- | |||
}} |
Revision as of 13:37, 13 September 2013
Short description: | p@chr17:21587220..21587237, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:21587220..21587237, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 9.87e-10 | 27 |
thymus | 1.33e-09 | 23 |
neck | 1.33e-09 | 23 |
respiratory system epithelium | 1.33e-09 | 23 |
hemolymphoid system gland | 1.33e-09 | 23 |
pharyngeal epithelium | 1.33e-09 | 23 |
thymic region | 1.33e-09 | 23 |
pharyngeal gland | 1.33e-09 | 23 |
entire pharyngeal arch endoderm | 1.33e-09 | 23 |
thymus primordium | 1.33e-09 | 23 |
early pharyngeal endoderm | 1.33e-09 | 23 |
pharynx | 3.87e-09 | 24 |
gland of gut | 3.87e-09 | 24 |
upper respiratory tract | 3.87e-09 | 24 |
chordate pharynx | 3.87e-09 | 24 |
pharyngeal arch system | 3.87e-09 | 24 |
pharyngeal region of foregut | 3.87e-09 | 24 |
connective tissue | 4.47e-09 | 46 |
hemopoietic organ | 2.64e-07 | 29 |
immune organ | 2.64e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.29e-10 | 3 |
muscle cancer | 1.29e-10 | 3 |
organ system cancer | 5.96e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.