FFCP PHASE1:Mm9::chr2:5635387..5635448,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227541|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=100bp_to_ENSMUST00000155927_5end|description=CAGE_peak_3_at_Camk1d_5end|id=chr2:5635387..5635448,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.09e-10!48;UBERON:0002390!9.17e-10!45;UBERON:0003061!9.17e-10!45;UBERON:0002405!4.20e-08!70;UBERON:0001007!7.72e-08!128;UBERON:0001555!7.72e-08!128;UBERON:0007026!7.72e-08!128;UBERON:0004921!1.67e-07!126;UBERON:0004185!1.67e-07!126;UBERON:0004119!3.31e-07!130;UBERON:0000925!3.31e-07!130;UBERON:0006595!3.31e-07!130;UBERON:0004177!7.29e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.84e-11,48;UBERON:0002405,3.84e-11,48;UBERON:0002390,3.64e-10,45;UBERON:0003061,3.64e-10,45;UBERON:0001007,2.01e-08,116;UBERON:0001555,2.01e-08,116;UBERON:0007026,2.01e-08,116;UBERON:0004921,4.60e-08,114;UBERON:0004119,8.92e-08,118;UBERON:0000925,8.92e-08,118;UBERON:0006595,8.92e-08,118;UBERON:0004177,1.23e-07,29;UBERON:0005057,1.23e-07,29;UBERON:0000077,6.35e-07,35|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.60492842261366,2.50447864973174,3.18970616632591,2.10251376535973,9.68424925811822,3.37892933164,6.78787126333781,0.856089841127525,0.478632953972018,12.3264525550468,10.1407666806037,5.99597571268193,6.2767332890846,1.39912375625629,20.5050407482854,21.1156227752838,19.5219239827094,3.06155844543851,3.87234709683453,4.70159620450084,2.3998863419011,3.67054849707472,0,1.29228598847722,0.430942465371778,2.47030445293286,4.03248207615889,1.77384408524244,0,0,0,4.62162591602039,2.49351968037739,5.71674197534634,13.393012183581,10.9386948233332,11.5175223674236,29.9998058895817,23.9065919735456,8.73918635456076,0.503587271902309,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,1.43752564364972,20.4694779390438,17.4086914082723,16.8046899571232,0.514518872071894,0,1.03134418455488,0.606949382578793,0,1.26766280701236,0,0.889294796111139,7.19919773825119,3.9554654502679,6.3943210345149,3.29560121570245,0.768436610643109,0.829516898467821,0.540023753326763,0.210324961351382,2.57085885963423,2.20868540951614,0.244981598429908,0.287536413054709,0.919218786610021,3.30347642998166,2.55374676170375,2.76491759861238,0.395658863190582,0.182975287204819,0.52091337055676,1.95428099300967,0.56276261003168,2.13917546887534,1.17851434189467,0.569486723196412,1.1183966749518,0.227178579999552,0.151143120213571,1.15945795480671,1.72084775396277,0,0,0,0.448026887097336,2.10666630197628,0.511290967734173,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0,0.253359865475099,0,1.7127581957859,44.2783781036664,3.11728492036132,0.520455980298408,0.608930956624282,0.230615497256059,0.150722640552623,0.940709657085638,0.628332956648377,0.247194967734374,4.62717942143717,7.07688441559899,1.7794353494215,6.40440403535141,5.81850303762267,3.72783522436244,2.04946557908083,0.83778682725382,3.0654846625031,5.15205035375457,1.79970819298022,2.41433431438823,2.84602214869163,0.915001205637253,0.376963056338593,4.17178368461463,2.81287003063364,1.66230435647648,1.94689515681309,0.611036183101898,6.09594155989456,1.26361379216837,1.89397670297827,0.390361328888111,0.919608417733892,0.900310649026746,0.60281927134286,0.816437989815934,1.0249097622788,0.187403449119458,2.58703370739016,0,0.378212160335639,0.351902248327898,0.657587197282725,1.94633074457919,4.52727816478817,2.88094990971121,0.199034266818493,0.702213187313235,1.02939162845886,0.852490498186778,0.828503090142008,0.469052119962192,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.804820204198858,0.817357396570186,0.16455984991348,1.14917224855367,1.05389452409612,0.584799949701329,3.29325172936576,1.47627060636409,2.52347938276953,2.26390147234426,1.65209391491899,2.64450566663544,0.639864751605702,0.928946687441754,1.9330119198314,1.21010114774006,1.77902435075896,2.85338439168839,4.2707615539006,1.64698954724011,3.2673577144035,3.38226002469956,4.48417400373976,0.898819408654221,3.8904848977445,2.98711909881551,0.189667900953082,1.02823661348756,2.25415471346161,0,0.581857461502877,0.49095073923223,0.569128834118316,0.885660887877613,0.941992367048249,0.616985819609003,1.48226313543574,0.667380422864376,1.57247196090562,0.674586337154561,2.43432145666204,1.4470629585145,3.56476192493988,3.16465751195892,2.2698931748505,1.92192989231657,10.0637744569148,7.07067800570156,4.99260276983297,1.76805214562978,1.07638448113147,1.4473305640901,9.42241269849684,0.568474235311454,0.488894929326078,0.848725428875941,0.938760993154008,1.67506257441816,2.38043640886014,1.56106918286239,3.31033802623001,3.5434350343804,4.46473352240964,7.70157579163969,7.42545422023351,6.65385669474953,24.1266054302836,15.7732648307426,2.45882136509518,1.93155722413313,4.0137647496948,2.81308047821288,0.655739781506702,2.01976741763498,0,0.780877488593277,0.21542339773279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| ||
|EntrezGene=227541 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=100bp_to_ENSMUST00000155927_5end | |||
|description=CAGE_peak_3_at_Camk1d_5end | |||
|id=chr2:5635387..5635448,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-10!48;UBERON:0002390!9.17e-10!45;UBERON:0003061!9.17e-10!45;UBERON:0002405!4.20e-08!70;UBERON:0001007!7.72e-08!128;UBERON:0001555!7.72e-08!128;UBERON:0007026!7.72e-08!128;UBERON:0004921!1.67e-07!126;UBERON:0004185!1.67e-07!126;UBERON:0004119!3.31e-07!130;UBERON:0000925!3.31e-07!130;UBERON:0006595!3.31e-07!130;UBERON:0004177!7.29e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.84e-11,48;UBERON:0002405,3.84e-11,48;UBERON:0002390,3.64e-10,45;UBERON:0003061,3.64e-10,45;UBERON:0001007,2.01e-08,116;UBERON:0001555,2.01e-08,116;UBERON:0007026,2.01e-08,116;UBERON:0004921,4.60e-08,114;UBERON:0004119,8.92e-08,118;UBERON:0000925,8.92e-08,118;UBERON:0006595,8.92e-08,118;UBERON:0004177,1.23e-07,29;UBERON:0005057,1.23e-07,29;UBERON:0000077,6.35e-07,35 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.60492842261366,2.50447864973174,3.18970616632591,2.10251376535973,9.68424925811822,3.37892933164,6.78787126333781,0.856089841127525,0.478632953972018,12.3264525550468,10.1407666806037,5.99597571268193,6.2767332890846,1.39912375625629,20.5050407482854,21.1156227752838,19.5219239827094,3.06155844543851,3.87234709683453,4.70159620450084,2.3998863419011,3.67054849707472,0,1.29228598847722,0.430942465371778,2.47030445293286,4.03248207615889,1.77384408524244,0,0,0,4.62162591602039,2.49351968037739,5.71674197534634,13.393012183581,10.9386948233332,11.5175223674236,29.9998058895817,23.9065919735456,8.73918635456076,0.503587271902309,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,1.43752564364972,20.4694779390438,17.4086914082723,16.8046899571232,0.514518872071894,0,1.03134418455488,0.606949382578793,0,1.26766280701236,0,0.889294796111139,7.19919773825119,3.9554654502679,6.3943210345149,3.29560121570245,0.768436610643109,0.829516898467821,0.540023753326763,0.210324961351382,2.57085885963423,2.20868540951614,0.244981598429908,0.287536413054709,0.919218786610021,3.30347642998166,2.55374676170375,2.76491759861238,0.395658863190582,0.182975287204819,0.52091337055676,1.95428099300967,0.56276261003168,2.13917546887534,1.17851434189467,0.569486723196412,1.1183966749518,0.227178579999552,0.151143120213571,1.15945795480671,1.72084775396277,0,0,0,0.448026887097336,2.10666630197628,0.511290967734173,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0,0.253359865475099,0,1.7127581957859,44.2783781036664,3.11728492036132,0.520455980298408,0.608930956624282,0.230615497256059,0.150722640552623,0.940709657085638,0.628332956648377,0.247194967734374,4.62717942143717,7.07688441559899,1.7794353494215,6.40440403535141,5.81850303762267,3.72783522436244,2.04946557908083,0.83778682725382,3.0654846625031,5.15205035375457,1.79970819298022,2.41433431438823,2.84602214869163,0.915001205637253,0.376963056338593,4.17178368461463,2.81287003063364,1.66230435647648,1.94689515681309,0.611036183101898,6.09594155989456,1.26361379216837,1.89397670297827,0.390361328888111,0.919608417733892,0.900310649026746,0.60281927134286,0.816437989815934,1.0249097622788,0.187403449119458,2.58703370739016,0,0.378212160335639,0.351902248327898,0.657587197282725,1.94633074457919,4.52727816478817,2.88094990971121,0.199034266818493,0.702213187313235,1.02939162845886,0.852490498186778,0.828503090142008,0.469052119962192,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.804820204198858,0.817357396570186,0.16455984991348,1.14917224855367,1.05389452409612,0.584799949701329,3.29325172936576,1.47627060636409,2.52347938276953,2.26390147234426,1.65209391491899,2.64450566663544,0.639864751605702,0.928946687441754,1.9330119198314,1.21010114774006,1.77902435075896,2.85338439168839,4.2707615539006,1.64698954724011,3.2673577144035,3.38226002469956,4.48417400373976,0.898819408654221,3.8904848977445,2.98711909881551,0.189667900953082,1.02823661348756,2.25415471346161,0,0.581857461502877,0.49095073923223,0.569128834118316,0.885660887877613,0.941992367048249,0.616985819609003,1.48226313543574,0.667380422864376,1.57247196090562,0.674586337154561,2.43432145666204,1.4470629585145,3.56476192493988,3.16465751195892,2.2698931748505,1.92192989231657,10.0637744569148,7.07067800570156,4.99260276983297,1.76805214562978,1.07638448113147,1.4473305640901,9.42241269849684,0.568474235311454,0.488894929326078,0.848725428875941,0.938760993154008,1.67506257441816,2.38043640886014,1.56106918286239,3.31033802623001,3.5434350343804,4.46473352240964,7.70157579163969,7.42545422023351,6.65385669474953,24.1266054302836,15.7732648307426,2.45882136509518,1.93155722413313,4.0137647496948,2.81308047821288,0.655739781506702,2.01976741763498,0,0.780877488593277,0.215423397732799,0.477937595905104,0.891194696329576,0,0.809621403349789,0.292255857911312,1.18586333383957,2.89189184779626,2.41298144854057,0.35613120733451,0.81443479676788,5.60898418106621,2.65490276679926,0.728341908464944,1.51161778482376,1.50884063804718,0.885905678642318,2.76691633149535,3.10113951801865,1.09060118843252,0.712994756769443,3.16036757935816,4.21674434299995,1.03135543248187,1.36175842301515,0.36012218806262,0.258717367565509,0.857348140126369,0.886701168211368,1.96205699362278,1.15184314421485,0.913394847343798,0.469343416127421,0.21183207086382,4.41056796109924,3.62749756471256,1.61464426695906,1.32688434841943,0.835606408021955,1.47726809770555,4.95517422270746,6.11903496634682,13.6696704638282,5.57244543500701,6.66700298530962,5.08594833912666,8.47504211870356,11.6676868335327,9.68877050964975,9.93655311497972,10.3649980353318,0,0.316335993581135,2.23651413839534,3.78018692876304,1.04544148007234,1.9652630737156,1.61837215661785,3.2234847732881,3.40282724579238,5.18459893167171,3.10669656543463,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.168956125490778,0.469428954583016,0.520817539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| |||
|short_description=p3@Camk1d | |||
}} |
Revision as of 00:09, 14 September 2013
Short description: | p3@Camk1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Camk1d_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 100bp_to_ENSMUST00000155927_5end |
EntrezGene: | Camk1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.84e-11 | 48 |
immune system | 3.84e-11 | 48 |
hematopoietic system | 3.64e-10 | 45 |
blood island | 3.64e-10 | 45 |
digestive system | 2.01e-08 | 116 |
digestive tract | 2.01e-08 | 116 |
primitive gut | 2.01e-08 | 116 |
subdivision of digestive tract | 4.60e-08 | 114 |
endoderm-derived structure | 8.92e-08 | 118 |
endoderm | 8.92e-08 | 118 |
presumptive endoderm | 8.92e-08 | 118 |
hemopoietic organ | 1.23e-07 | 29 |
immune organ | 1.23e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 6.35e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.