FFCP PHASE1:Mm9::chr16:20241377..20241436,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=208158|HGNC=|MCL_coexpression_id=1|UniProt=Q14BB9|association_with_transcript=0bp_to_ENSMUST00000040880,NM_198599,uc007ypk.1_5end|description=CAGE_peak_1_at_Map6d1_5end|id=chr16:20241377..20241436,-|ontology_enrichment_celltype=CL:0000540!5.30e-12!33;CL:0000047!5.30e-12!33;CL:0000031!5.30e-12!33;CL:0000404!5.30e-12!33;CL:0000117!6.63e-12!23;CL:0000337!6.63e-12!23;CL:0000393!9.06e-10!39;CL:0000211!9.06e-10!39;CL:0000221!1.05e-09!44;CL:0000133!1.05e-09!44;CL:0002319!1.58e-09!43;CL:0000055!1.42e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-18,23;CL:0000337,1.34e-18,23;CL:0000540,1.08e-12,33;CL:0000047,1.08e-12,33;CL:0000031,1.08e-12,33;CL:0000404,1.08e-12,33;CL:0002319,8.38e-11,43;CL:0000221,1.98e-10,44;CL:0000133,1.98e-10,44;CL:0000393,6.08e-10,39;CL:0000211,6.08e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.18e-24!73;UBERON:0005743!2.18e-24!73;UBERON:0000073!3.22e-24!75;UBERON:0001016!3.22e-24!75;UBERON:0004121!2.30e-23!102;UBERON:0000924!2.30e-23!102;UBERON:0006601!2.30e-23!102;UBERON:0002346!8.67e-23!71;UBERON:0003075!8.67e-23!71;UBERON:0007284!8.67e-23!71;UBERON:0001049!1.01e-19!52;UBERON:0005068!1.01e-19!52;UBERON:0006241!1.01e-19!52;UBERON:0007135!1.01e-19!52;UBERON:0000033!4.25e-19!63;UBERON:0000955!1.53e-18!50;UBERON:0006238!1.53e-18!50;UBERON:0002616!6.69e-18!49;UBERON:0002020!2.38e-16!34;UBERON:0003056!9.47e-16!49;UBERON:0003080!6.74e-14!40;UBERON:0002791!1.95e-13!29;UBERON:0003528!1.95e-13!29;UBERON:0001893!1.95e-13!29;UBERON:0002780!2.83e-13!39;UBERON:0001890!2.83e-13!39;UBERON:0006240!2.83e-13!39;UBERON:0000956!4.40e-09!21;UBERON:0001869!4.40e-09!21;UBERON:0000203!4.40e-09!21;UBERON:0007811!4.86e-09!86;UBERON:0000153!4.96e-09!94;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10;UBERON:0002619!3.86e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.19e-37,73;UBERON:0001016,1.70e-35,75;UBERON:0000073,2.78e-35,54;UBERON:0001049,9.19e-33,52;UBERON:0005068,9.19e-33,52;UBERON:0006241,9.19e-33,52;UBERON:0007135,9.19e-33,52;UBERON:0002020,2.78e-30,34;UBERON:0004121,4.27e-28,95;UBERON:0000924,4.27e-28,95;UBERON:0006601,4.27e-28,95;UBERON:0002346,9.68e-28,64;UBERON:0003075,9.68e-28,64;UBERON:0007284,9.68e-28,64;UBERON:0000955,2.17e-26,47;UBERON:0006238,2.17e-26,47;UBERON:0002616,4.05e-25,46;UBERON:0003528,5.80e-24,29;UBERON:0002791,5.80e-24,29;UBERON:0001893,5.80e-24,29;UBERON:0010371,5.65e-23,73;UBERON:0003080,3.87e-21,40;UBERON:0002780,6.88e-20,39;UBERON:0001890,6.88e-20,39;UBERON:0006240,6.88e-20,39;UBERON:0003056,1.29e-18,49;UBERON:0010314,3.67e-18,92;UBERON:0002619,2.69e-16,17;UBERON:0002021,3.41e-16,10;UBERON:0000411,3.41e-16,10;UBERON:0001950,3.41e-16,10;UBERON:0000956,1.20e-14,21;UBERON:0001869,1.20e-14,21;UBERON:0000203,1.20e-14,21;UBERON:0003076,2.62e-12,12;UBERON:0003057,2.62e-12,12;UBERON:0002420,7.27e-11,8;UBERON:0007245,7.27e-11,8;UBERON:0010009,7.27e-11,8;UBERON:0010011,7.27e-11,8;UBERON:0000454,7.27e-11,8;UBERON:0000025,2.04e-09,114;UBERON:0002240,3.25e-09,6;UBERON:0005174,3.25e-09,6;UBERON:0001137,3.25e-09,6;UBERON:0004111,3.50e-08,122;UBERON:0001948,1.40e-07,5;UBERON:0002315,1.40e-07,5;UBERON:0000369,4.27e-07,5;UBERON:0002435,4.27e-07,5;UBERON:0000204,4.27e-07,5;UBERON:0010082,4.27e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,3.03474691289397,2.64495489636016,1.90149421051854,0.677689064138264,0,0,0,0,2.69640099466564,2.68952813725088,0.933206510776299,0.675029691658453,0.210324961351382,12.8542942981712,12.8103753751936,1.10241719293459,0.766763768145891,1.83843757322004,9.91042928994498,23.6221575457597,19.8152427900554,1.97829431595291,2.01272815925301,2.6045668527838,18.9844439320939,8.4414391504752,13.9046405476897,8.54422897873636,6.26435395516053,3.16879057903011,0.302904773332736,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,0.346970653532272,0.304465478312141,0,0.301445281105245,1.17588707135705,2.01066546127481,0,0,0,0,0.220841518460394,0,0,23.4224637609238,24.2958179903608,0,0,0,0,22.7681771895331,22.8750301409313,2.51308704225729,27.638066910572,30.6858548796397,25.3501414362663,24.6606719862992,0,0.124406970610093,0,0.210441855886474,0.780722657776222,0.459804208866946,0.360124259610698,0.30140963567143,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0.431135985865684,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.946978942340841,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0.162137619091711,0.29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| ||
|EntrezGene=208158 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q14BB9 | |||
|association_with_transcript=0bp_to_ENSMUST00000040880,NM_198599,uc007ypk.1_5end | |||
|description=CAGE_peak_1_at_Map6d1_5end | |||
|id=chr16:20241377..20241436,- | |||
|ontology_enrichment_celltype=CL:0000540!5.30e-12!33;CL:0000047!5.30e-12!33;CL:0000031!5.30e-12!33;CL:0000404!5.30e-12!33;CL:0000117!6.63e-12!23;CL:0000337!6.63e-12!23;CL:0000393!9.06e-10!39;CL:0000211!9.06e-10!39;CL:0000221!1.05e-09!44;CL:0000133!1.05e-09!44;CL:0002319!1.58e-09!43;CL:0000055!1.42e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-18,23;CL:0000337,1.34e-18,23;CL:0000540,1.08e-12,33;CL:0000047,1.08e-12,33;CL:0000031,1.08e-12,33;CL:0000404,1.08e-12,33;CL:0002319,8.38e-11,43;CL:0000221,1.98e-10,44;CL:0000133,1.98e-10,44;CL:0000393,6.08e-10,39;CL:0000211,6.08e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.18e-24!73;UBERON:0005743!2.18e-24!73;UBERON:0000073!3.22e-24!75;UBERON:0001016!3.22e-24!75;UBERON:0004121!2.30e-23!102;UBERON:0000924!2.30e-23!102;UBERON:0006601!2.30e-23!102;UBERON:0002346!8.67e-23!71;UBERON:0003075!8.67e-23!71;UBERON:0007284!8.67e-23!71;UBERON:0001049!1.01e-19!52;UBERON:0005068!1.01e-19!52;UBERON:0006241!1.01e-19!52;UBERON:0007135!1.01e-19!52;UBERON:0000033!4.25e-19!63;UBERON:0000955!1.53e-18!50;UBERON:0006238!1.53e-18!50;UBERON:0002616!6.69e-18!49;UBERON:0002020!2.38e-16!34;UBERON:0003056!9.47e-16!49;UBERON:0003080!6.74e-14!40;UBERON:0002791!1.95e-13!29;UBERON:0003528!1.95e-13!29;UBERON:0001893!1.95e-13!29;UBERON:0002780!2.83e-13!39;UBERON:0001890!2.83e-13!39;UBERON:0006240!2.83e-13!39;UBERON:0000956!4.40e-09!21;UBERON:0001869!4.40e-09!21;UBERON:0000203!4.40e-09!21;UBERON:0007811!4.86e-09!86;UBERON:0000153!4.96e-09!94;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10;UBERON:0002619!3.86e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.19e-37,73;UBERON:0001016,1.70e-35,75;UBERON:0000073,2.78e-35,54;UBERON:0001049,9.19e-33,52;UBERON:0005068,9.19e-33,52;UBERON:0006241,9.19e-33,52;UBERON:0007135,9.19e-33,52;UBERON:0002020,2.78e-30,34;UBERON:0004121,4.27e-28,95;UBERON:0000924,4.27e-28,95;UBERON:0006601,4.27e-28,95;UBERON:0002346,9.68e-28,64;UBERON:0003075,9.68e-28,64;UBERON:0007284,9.68e-28,64;UBERON:0000955,2.17e-26,47;UBERON:0006238,2.17e-26,47;UBERON:0002616,4.05e-25,46;UBERON:0003528,5.80e-24,29;UBERON:0002791,5.80e-24,29;UBERON:0001893,5.80e-24,29;UBERON:0010371,5.65e-23,73;UBERON:0003080,3.87e-21,40;UBERON:0002780,6.88e-20,39;UBERON:0001890,6.88e-20,39;UBERON:0006240,6.88e-20,39;UBERON:0003056,1.29e-18,49;UBERON:0010314,3.67e-18,92;UBERON:0002619,2.69e-16,17;UBERON:0002021,3.41e-16,10;UBERON:0000411,3.41e-16,10;UBERON:0001950,3.41e-16,10;UBERON:0000956,1.20e-14,21;UBERON:0001869,1.20e-14,21;UBERON:0000203,1.20e-14,21;UBERON:0003076,2.62e-12,12;UBERON:0003057,2.62e-12,12;UBERON:0002420,7.27e-11,8;UBERON:0007245,7.27e-11,8;UBERON:0010009,7.27e-11,8;UBERON:0010011,7.27e-11,8;UBERON:0000454,7.27e-11,8;UBERON:0000025,2.04e-09,114;UBERON:0002240,3.25e-09,6;UBERON:0005174,3.25e-09,6;UBERON:0001137,3.25e-09,6;UBERON:0004111,3.50e-08,122;UBERON:0001948,1.40e-07,5;UBERON:0002315,1.40e-07,5;UBERON:0000369,4.27e-07,5;UBERON:0002435,4.27e-07,5;UBERON:0000204,4.27e-07,5;UBERON:0010082,4.27e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,3.03474691289397,2.64495489636016,1.90149421051854,0.677689064138264,0,0,0,0,2.69640099466564,2.68952813725088,0.933206510776299,0.675029691658453,0.210324961351382,12.8542942981712,12.8103753751936,1.10241719293459,0.766763768145891,1.83843757322004,9.91042928994498,23.6221575457597,19.8152427900554,1.97829431595291,2.01272815925301,2.6045668527838,18.9844439320939,8.4414391504752,13.9046405476897,8.54422897873636,6.26435395516053,3.16879057903011,0.302904773332736,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,0.346970653532272,0.304465478312141,0,0.301445281105245,1.17588707135705,2.01066546127481,0,0,0,0,0.220841518460394,0,0,23.4224637609238,24.2958179903608,0,0,0,0,22.7681771895331,22.8750301409313,2.51308704225729,27.638066910572,30.6858548796397,25.3501414362663,24.6606719862992,0,0.124406970610093,0,0.210441855886474,0.780722657776222,0.459804208866946,0.360124259610698,0.30140963567143,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0.431135985865684,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.946978942340841,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0,26.2862435705159,3.39585220851639,0,0,0.639864751605702,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.685491075658373,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,30.8257132776561,24.9660892441393,0.327869890753351,0.252470927204373,0.315508219416257,0.780877488593277,0.646270193198397,0,0.668396022247182,1.13230612315533,0.404810701674894,0.584511715822624,0.395287777946524,19.6006003017302,1.56134093729095,0.890328018336276,0.651547837414304,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.180938774784468,0.477489376012546,0.328281799490123,0,32.4494278518392,0.170870880797853,0.619160603889667,0,0.376736914009382,0,0,0,0,0.138199973804424,0,0.790839983952838,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,1.69107881605257,0.149516546043979,0.496375471371293,0.583353565032143,0.774958940866387,0.675824501963113,1.64300134104056,0.911430693907651,0.629156066554265,1.93267296660805,1.15212002503146,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,22.0253218620656,29.9211403729665,28.0718801585304,24.9187114398347,23.9778881919725,24.1726047164704,21.6007200074178,17.5625269257446,17.2194115413998,33.6544202638683,0.415149390336707,0.798049746802062,0.682934423016537,0.243106717068294,0.419226325255965,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,1.01391719956096,0.565879024158229,0.655490552289177,1.21647789569252,1.03383844120104,0.476293691283074,0.463537303779422,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.953744759789284,0.436039249896986,0.846984423737976,0.507687647350059,1.46342378298218,0,0.543216455383447,0.561142271657738,0.949080144993393,0.689531376628944,0,0.77468420592983,0,0.999242311751784,0.701794825336225,0.644613162144895,0.191288332068843,0.882365676478062,0.927471342481686 | |||
|short_description=p1@Map6d1 | |||
}} |
Revision as of 12:09, 13 September 2013
Short description: | p1@Map6d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Map6d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000040880, NM_198599, uc007ypk.1_5end |
EntrezGene: | Map6d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-18 | 23 |
neuron | 1.08e-12 | 33 |
neuronal stem cell | 1.08e-12 | 33 |
neuroblast | 1.08e-12 | 33 |
electrically signaling cell | 1.08e-12 | 33 |
neural cell | 8.38e-11 | 43 |
ectodermal cell | 1.98e-10 | 44 |
neurectodermal cell | 1.98e-10 | 44 |
electrically responsive cell | 6.08e-10 | 39 |
electrically active cell | 6.08e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.