FFCP PHASE1:Mm9::chr8:39724506..39724535,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=244431|HGNC=|MCL_coexpression_id=1|UniProt=Q8BX51,D6RFA5|association_with_transcript=26bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end|description=CAGE_peak_1_at_Sgcz_5end|id=chr8:39724506..39724535,-|ontology_enrichment_celltype=CL:0000117!1.73e-09!23;CL:0000337!1.73e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-16,23;CL:0000337,6.72e-16,23;CL:0000540,8.24e-10,33;CL:0000047,8.24e-10,33;CL:0000031,8.24e-10,33;CL:0000404,8.24e-10,33;CL:0000393,1.08e-07,39;CL:0000211,1.08e-07,39;CL:0002612,9.25e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.77e-18!52;UBERON:0005068!2.77e-18!52;UBERON:0006241!2.77e-18!52;UBERON:0007135!2.77e-18!52;UBERON:0000033!6.34e-18!63;UBERON:0002346!1.69e-17!71;UBERON:0003075!1.69e-17!71;UBERON:0007284!1.69e-17!71;UBERON:0000955!1.44e-16!50;UBERON:0006238!1.44e-16!50;UBERON:0001017!2.88e-16!73;UBERON:0005743!2.88e-16!73;UBERON:0002616!7.22e-16!49;UBERON:0003056!3.13e-15!49;UBERON:0000073!3.16e-15!75;UBERON:0001016!3.16e-15!75;UBERON:0002020!2.75e-14!34;UBERON:0003080!5.14e-13!40;UBERON:0004121!6.25e-13!102;UBERON:0000924!6.25e-13!102;UBERON:0006601!6.25e-13!102;UBERON:0002780!2.69e-12!39;UBERON:0001890!2.69e-12!39;UBERON:0006240!2.69e-12!39;UBERON:0002791!1.04e-10!29;UBERON:0003528!1.04e-10!29;UBERON:0001893!1.04e-10!29;UBERON:0000153!7.05e-09!94;UBERON:0007811!9.74e-09!86;UBERON:0002021!1.92e-08!10;UBERON:0000411!1.92e-08!10;UBERON:0001950!1.92e-08!10;UBERON:0002619!3.46e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.93e-31,54;UBERON:0001017,5.41e-29,73;UBERON:0001049,1.17e-28,52;UBERON:0005068,1.17e-28,52;UBERON:0006241,1.17e-28,52;UBERON:0007135,1.17e-28,52;UBERON:0001016,6.08e-28,75;UBERON:0002020,1.53e-23,34;UBERON:0002346,4.56e-23,64;UBERON:0003075,4.56e-23,64;UBERON:0007284,4.56e-23,64;UBERON:0000955,1.64e-21,47;UBERON:0006238,1.64e-21,47;UBERON:0004121,4.37e-21,95;UBERON:0000924,4.37e-21,95;UBERON:0006601,4.37e-21,95;UBERON:0002616,3.37e-20,46;UBERON:0010371,4.22e-19,73;UBERON:0003080,2.11e-18,40;UBERON:0002780,5.01e-17,39;UBERON:0001890,5.01e-17,39;UBERON:0006240,5.01e-17,39;UBERON:0003528,2.91e-16,29;UBERON:0002791,2.91e-16,29;UBERON:0001893,2.91e-16,29;UBERON:0003056,3.91e-15,49;UBERON:0002021,1.71e-14,10;UBERON:0000411,1.71e-14,10;UBERON:0001950,1.71e-14,10;UBERON:0010314,2.60e-13,92;UBERON:0002240,2.54e-11,6;UBERON:0005174,2.54e-11,6;UBERON:0001137,2.54e-11,6;UBERON:0003076,4.01e-11,12;UBERON:0003057,4.01e-11,12;UBERON:0000025,6.62e-10,114;UBERON:0001948,8.56e-10,5;UBERON:0002315,8.56e-10,5;UBERON:0002420,1.02e-09,8;UBERON:0007245,1.02e-09,8;UBERON:0010009,1.02e-09,8;UBERON:0010011,1.02e-09,8;UBERON:0000454,1.02e-09,8;UBERON:0002619,2.50e-09,17;UBERON:0000956,8.48e-09,21;UBERON:0001869,8.48e-09,21;UBERON:0000203,8.48e-09,21;UBERON:0004111,1.09e-08,122;UBERON:0002950,1.68e-07,4;UBERON:0001891,1.68e-07,4;UBERON:0009616,1.68e-07,4;UBERON:0010286,1.68e-07,4;UBERON:0002257,9.25e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0,0,4.85606673486466,2.87129103237098,0.61245399607477,0.479227355091182,0,2.20231761998777,3.70293280447044,2.91852413186863,1.58263545276233,2.8361169516747,0.52091337055676,3.35019598801657,3.37657566019008,2.44477196442896,5.30331453852602,7.26095572075425,4.65998614563251,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,5.84183493678809,4.11750542536764,2.89005009859588,6.08385120672968,6.90431734791892,3.74018480207208,5.353961681236,0.203678727700633,0,0,0.210441855886474,0.650602214813519,1.14951052216736,0.360124259610698,0.60281927134286,0.204109497453984,0.2562274405697,0.562210347358373,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,2.10289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0.784993639206874,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,0,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.85321415970701,4.45404409050372,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,4.17717711348349,0,0.178065603667255,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,1.07168517515796,0.532020700926821,0.535106452806212,1.81003922662333,0,0,0,0,0,0.161464426695906,0,0,0,0,4.07935664423121,0.341741761595705,0,0,0,0,0,0,0,0,0,0.949007980743406,1.21991680276109,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0,0.183151624267265,0,0,2.25900737046827,6.90487854760765,0.572895513439397,4.81188910562325,4.7955776383945,5.2877572817279,4.05013500139084,6.75481804836331,6.34399372577886,4.65984280576638,0.103787347584177,0.399024873401031,1.36586884603307,0.972426868273176,0.209613162627982,0,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,1.02440243847791,0.746661096422973,0.476293691283074,0.811190281613988,0.77163688185482,1.23625770240992,1.03039244094078,2.40008476669791,1.24233064311536,1.1921809497366,0.726732083161643,0.846984423737976,1.18460451048347,0.548783918618318,0.263069711437843,1.22223702461276,1.12228454331548,0.830445126869219,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p1@Sgcz}} | ||
|EntrezGene=244431 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BX51,D6RFA5 | |||
|association_with_transcript=26bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end | |||
|description=CAGE_peak_1_at_Sgcz_5end | |||
|id=chr8:39724506..39724535,- | |||
|ontology_enrichment_celltype=CL:0000117!1.73e-09!23;CL:0000337!1.73e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-16,23;CL:0000337,6.72e-16,23;CL:0000540,8.24e-10,33;CL:0000047,8.24e-10,33;CL:0000031,8.24e-10,33;CL:0000404,8.24e-10,33;CL:0000393,1.08e-07,39;CL:0000211,1.08e-07,39;CL:0002612,9.25e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.77e-18!52;UBERON:0005068!2.77e-18!52;UBERON:0006241!2.77e-18!52;UBERON:0007135!2.77e-18!52;UBERON:0000033!6.34e-18!63;UBERON:0002346!1.69e-17!71;UBERON:0003075!1.69e-17!71;UBERON:0007284!1.69e-17!71;UBERON:0000955!1.44e-16!50;UBERON:0006238!1.44e-16!50;UBERON:0001017!2.88e-16!73;UBERON:0005743!2.88e-16!73;UBERON:0002616!7.22e-16!49;UBERON:0003056!3.13e-15!49;UBERON:0000073!3.16e-15!75;UBERON:0001016!3.16e-15!75;UBERON:0002020!2.75e-14!34;UBERON:0003080!5.14e-13!40;UBERON:0004121!6.25e-13!102;UBERON:0000924!6.25e-13!102;UBERON:0006601!6.25e-13!102;UBERON:0002780!2.69e-12!39;UBERON:0001890!2.69e-12!39;UBERON:0006240!2.69e-12!39;UBERON:0002791!1.04e-10!29;UBERON:0003528!1.04e-10!29;UBERON:0001893!1.04e-10!29;UBERON:0000153!7.05e-09!94;UBERON:0007811!9.74e-09!86;UBERON:0002021!1.92e-08!10;UBERON:0000411!1.92e-08!10;UBERON:0001950!1.92e-08!10;UBERON:0002619!3.46e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.93e-31,54;UBERON:0001017,5.41e-29,73;UBERON:0001049,1.17e-28,52;UBERON:0005068,1.17e-28,52;UBERON:0006241,1.17e-28,52;UBERON:0007135,1.17e-28,52;UBERON:0001016,6.08e-28,75;UBERON:0002020,1.53e-23,34;UBERON:0002346,4.56e-23,64;UBERON:0003075,4.56e-23,64;UBERON:0007284,4.56e-23,64;UBERON:0000955,1.64e-21,47;UBERON:0006238,1.64e-21,47;UBERON:0004121,4.37e-21,95;UBERON:0000924,4.37e-21,95;UBERON:0006601,4.37e-21,95;UBERON:0002616,3.37e-20,46;UBERON:0010371,4.22e-19,73;UBERON:0003080,2.11e-18,40;UBERON:0002780,5.01e-17,39;UBERON:0001890,5.01e-17,39;UBERON:0006240,5.01e-17,39;UBERON:0003528,2.91e-16,29;UBERON:0002791,2.91e-16,29;UBERON:0001893,2.91e-16,29;UBERON:0003056,3.91e-15,49;UBERON:0002021,1.71e-14,10;UBERON:0000411,1.71e-14,10;UBERON:0001950,1.71e-14,10;UBERON:0010314,2.60e-13,92;UBERON:0002240,2.54e-11,6;UBERON:0005174,2.54e-11,6;UBERON:0001137,2.54e-11,6;UBERON:0003076,4.01e-11,12;UBERON:0003057,4.01e-11,12;UBERON:0000025,6.62e-10,114;UBERON:0001948,8.56e-10,5;UBERON:0002315,8.56e-10,5;UBERON:0002420,1.02e-09,8;UBERON:0007245,1.02e-09,8;UBERON:0010009,1.02e-09,8;UBERON:0010011,1.02e-09,8;UBERON:0000454,1.02e-09,8;UBERON:0002619,2.50e-09,17;UBERON:0000956,8.48e-09,21;UBERON:0001869,8.48e-09,21;UBERON:0000203,8.48e-09,21;UBERON:0004111,1.09e-08,122;UBERON:0002950,1.68e-07,4;UBERON:0001891,1.68e-07,4;UBERON:0009616,1.68e-07,4;UBERON:0010286,1.68e-07,4;UBERON:0002257,9.25e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0,0,4.85606673486466,2.87129103237098,0.61245399607477,0.479227355091182,0,2.20231761998777,3.70293280447044,2.91852413186863,1.58263545276233,2.8361169516747,0.52091337055676,3.35019598801657,3.37657566019008,2.44477196442896,5.30331453852602,7.26095572075425,4.65998614563251,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,5.84183493678809,4.11750542536764,2.89005009859588,6.08385120672968,6.90431734791892,3.74018480207208,5.353961681236,0.203678727700633,0,0,0.210441855886474,0.650602214813519,1.14951052216736,0.360124259610698,0.60281927134286,0.204109497453984,0.2562274405697,0.562210347358373,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,2.10289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0.784993639206874,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,0,0.568474235311454,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.85321415970701,4.45404409050372,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,4.17717711348349,0,0.178065603667255,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,1.07168517515796,0.532020700926821,0.535106452806212,1.81003922662333,0,0,0,0,0,0.161464426695906,0,0,0,0,4.07935664423121,0.341741761595705,0,0,0,0,0,0,0,0,0,0.949007980743406,1.21991680276109,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0,0.183151624267265,0,0,2.25900737046827,6.90487854760765,0.572895513439397,4.81188910562325,4.7955776383945,5.2877572817279,4.05013500139084,6.75481804836331,6.34399372577886,4.65984280576638,0.103787347584177,0.399024873401031,1.36586884603307,0.972426868273176,0.209613162627982,0,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,1.02440243847791,0.746661096422973,0.476293691283074,0.811190281613988,0.77163688185482,1.23625770240992,1.03039244094078,2.40008476669791,1.24233064311536,1.1921809497366,0.726732083161643,0.846984423737976,1.18460451048347,0.548783918618318,0.263069711437843,1.22223702461276,1.12228454331548,0.830445126869219,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Sgcz | |||
}} |
Revision as of 15:36, 14 September 2013
Short description: | p1@Sgcz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sgcz_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 26bp_to_ENSMUST00000118896, ENSMUST00000135764, NM_145841, uc009lme.2_5end |
EntrezGene: | Sgcz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.72e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.72e-16 | 23 |
neuron | 8.24e-10 | 33 |
neuronal stem cell | 8.24e-10 | 33 |
neuroblast | 8.24e-10 | 33 |
electrically signaling cell | 8.24e-10 | 33 |
electrically responsive cell | 1.08e-07 | 39 |
electrically active cell | 1.08e-07 | 39 |
neuron of the ventral spinal cord | 9.25e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.