FFCP PHASE1:Mm9::chr10:43724163..43724191,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11630|HGNC=|MCL_coexpression_id=25|UniProt=E9PVP1,Q4VC42|association_with_transcript=460bp_to_ENSMUST00000020017,NM_172393,uc007ezq.2_5end|description=CAGE_peak_1_at_Aim1_5end|id=chr10:43724163..43724191,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002076,8.30e-08,15;CL:0000223,1.13e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.97e-19,5;UBERON:0001003,4.97e-19,5;UBERON:0002097,4.97e-19,5;UBERON:0002199,4.97e-19,5;UBERON:0007029,4.97e-19,5;UBERON:0007376,4.97e-19,5;UBERON:0002416,4.97e-19,5;UBERON:0007383,4.97e-19,5;UBERON:0003102,2.19e-09,22;UBERON:0000080,1.81e-08,4;UBERON:0005904,1.81e-08,4;UBERON:0006947,1.81e-08,4;UBERON:0002120,1.81e-08,4;UBERON:0004054,1.81e-08,4;UBERON:0004875,1.81e-08,4;UBERON:0004876,1.81e-08,4;UBERON:0005721,1.81e-08,4;UBERON:0005754,1.81e-08,4;UBERON:0007297,1.81e-08,4;UBERON:0001911,2.26e-08,2;UBERON:0000076,2.26e-08,2;UBERON:0005333,2.26e-08,2;UBERON:0008425,2.26e-08,2;UBERON:0005311,2.26e-08,2;UBERON:0000058,3.28e-08,7|phase1_expression=0,1.39590163055744,0,0.90739263392049,0,1.00727563147134,1.16806320297763,0,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0,0.274228867211478,0,0.255129870453209,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0.878744730937887,0.388859798148567,0.839918529752175,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,1.06001872353102,0,0,2.54805239706646,0,0.432982082022428,1.52015919285059,2.02209778005913,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.11966273549084,2.52722758433675,0.631325567659422,0.130120442962704,0,0,0,0,0.2562274405697,0.187403449119458,0,0,0,0.175951124163949,0,0.278047249225598,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.162137619091711,0,0,0.134206418760372,0,0,0.330418782983798,0.528901133327089,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0.648414149624083,0.995706366271836,0,0,0,0,0.387904974335251,0.140271639780637,0.252946148497029,0.885660887877613,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,1.11642284300551,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0,0,0.478364305972461,0.491589944147214,0,0.144649058581512,0,0,7.37646409528554,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0.704015124191131,0.21183207086382,0.441056796109924,9.72828892354732,2.42196640043858,6.09160541774374,10.8628833042854,13.459553779095,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.565105371014073,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.247960367176008,0,1.03691978633434,1.24267862617385,0,0,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.665957860122194,0.269141569828427,0.335769232728157,0,0,0.183151624267265,1.2862102744744,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.811190281613988,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.726732083161643,0.282328141245992,0.592302255241736,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.192906610981141,0,0.467863216890817,0.859484216193193,0.382576664137687,0.882365676478062,0|short_description=p1@Aim1}} | ||
|EntrezGene=11630 | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=E9PVP1,Q4VC42 | |||
|association_with_transcript=460bp_to_ENSMUST00000020017,NM_172393,uc007ezq.2_5end | |||
|description=CAGE_peak_1_at_Aim1_5end | |||
|id=chr10:43724163..43724191,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.30e-08,15;CL:0000223,1.13e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.97e-19,5;UBERON:0001003,4.97e-19,5;UBERON:0002097,4.97e-19,5;UBERON:0002199,4.97e-19,5;UBERON:0007029,4.97e-19,5;UBERON:0007376,4.97e-19,5;UBERON:0002416,4.97e-19,5;UBERON:0007383,4.97e-19,5;UBERON:0003102,2.19e-09,22;UBERON:0000080,1.81e-08,4;UBERON:0005904,1.81e-08,4;UBERON:0006947,1.81e-08,4;UBERON:0002120,1.81e-08,4;UBERON:0004054,1.81e-08,4;UBERON:0004875,1.81e-08,4;UBERON:0004876,1.81e-08,4;UBERON:0005721,1.81e-08,4;UBERON:0005754,1.81e-08,4;UBERON:0007297,1.81e-08,4;UBERON:0001911,2.26e-08,2;UBERON:0000076,2.26e-08,2;UBERON:0005333,2.26e-08,2;UBERON:0008425,2.26e-08,2;UBERON:0005311,2.26e-08,2;UBERON:0000058,3.28e-08,7 | |||
|phase1_expression=0,1.39590163055744,0,0.90739263392049,0,1.00727563147134,1.16806320297763,0,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0,0.274228867211478,0,0.255129870453209,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0.878744730937887,0.388859798148567,0.839918529752175,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,1.06001872353102,0,0,2.54805239706646,0,0.432982082022428,1.52015919285059,2.02209778005913,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.11966273549084,2.52722758433675,0.631325567659422,0.130120442962704,0,0,0,0,0.2562274405697,0.187403449119458,0,0,0,0.175951124163949,0,0.278047249225598,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.162137619091711,0,0,0.134206418760372,0,0,0.330418782983798,0.528901133327089,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0.648414149624083,0.995706366271836,0,0,0,0,0.387904974335251,0.140271639780637,0.252946148497029,0.885660887877613,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,1.11642284300551,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0,0,0.478364305972461,0.491589944147214,0,0.144649058581512,0,0,7.37646409528554,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0.704015124191131,0.21183207086382,0.441056796109924,9.72828892354732,2.42196640043858,6.09160541774374,10.8628833042854,13.459553779095,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.565105371014073,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.247960367176008,0,1.03691978633434,1.24267862617385,0,0,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.665957860122194,0.269141569828427,0.335769232728157,0,0,0.183151624267265,1.2862102744744,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0,0.280924522409647,0.128050304809739,0.287177344778066,0.476293691283074,0.811190281613988,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.726732083161643,0.282328141245992,0.592302255241736,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.192906610981141,0,0.467863216890817,0.859484216193193,0.382576664137687,0.882365676478062,0 | |||
|short_description=p1@Aim1 | |||
}} |
Revision as of 16:47, 12 September 2013
Short description: | p1@Aim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | 460bp_to_ENSMUST00000020017, NM_172393, uc007ezq.2_5end |
EntrezGene: | Aim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.30e-08 | 15 |
endodermal cell | 1.13e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 4.97e-19 | 5 |
skin epidermis | 4.97e-19 | 5 |
skin of body | 4.97e-19 | 5 |
integument | 4.97e-19 | 5 |
surface | 4.97e-19 | 5 |
outer epithelium | 4.97e-19 | 5 |
integumental system | 4.97e-19 | 5 |
enveloping layer of ectoderm | 4.97e-19 | 5 |
surface structure | 2.19e-09 | 22 |
mesonephros | 1.81e-08 | 4 |
duct of male reproductive system | 1.81e-08 | 4 |
male genital duct | 1.81e-08 | 4 |
pronephros | 1.81e-08 | 4 |
internal male genitalia | 1.81e-08 | 4 |
nephrogenic cord | 1.81e-08 | 4 |
urogenital ridge | 1.81e-08 | 4 |
pronephric mesoderm | 1.81e-08 | 4 |
rostral part of nephrogenic cord | 1.81e-08 | 4 |
presumptive pronephric mesoderm | 1.81e-08 | 4 |
mammary gland | 2.26e-08 | 2 |
external ectoderm | 2.26e-08 | 2 |
mammary bud | 2.26e-08 | 2 |
mammary ridge | 2.26e-08 | 2 |
mammary placode | 2.26e-08 | 2 |
duct | 3.28e-08 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.