FFCP PHASE1:Mm9::chr14:68704765..68704777,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=237|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:68704765..68704777,+|id=chr14:68704765..68704777,+|ontology_enrichment_celltype=CL:0000117!2.10e-13!23;CL:0000337!2.10e-13!23;CL:0000540!1.74e-09!33;CL:0000047!1.74e-09!33;CL:0000031!1.74e-09!33;CL:0000404!1.74e-09!33;CL:0000393!4.33e-07!39;CL:0000211!4.33e-07!39;CL:0000221!5.31e-07!44;CL:0000133!5.31e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-20,23;CL:0000337,1.82e-20,23;CL:0000540,1.92e-13,33;CL:0000047,1.92e-13,33;CL:0000031,1.92e-13,33;CL:0000404,1.92e-13,33;CL:0000393,5.81e-11,39;CL:0000211,5.81e-11,39;CL:0002612,1.37e-10,3;CL:0002610,3.01e-10,3;CL:0002319,1.07e-09,43;CL:0002614,1.21e-09,3;CL:0000221,2.05e-09,44;CL:0000133,2.05e-09,44;CL:0002611,1.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.54e-27!71;UBERON:0003075!1.54e-27!71;UBERON:0007284!1.54e-27!71;UBERON:0000033!4.91e-25!63;UBERON:0001049!2.89e-24!52;UBERON:0005068!2.89e-24!52;UBERON:0006241!2.89e-24!52;UBERON:0007135!2.89e-24!52;UBERON:0004121!5.06e-24!102;UBERON:0000924!5.06e-24!102;UBERON:0006601!5.06e-24!102;UBERON:0000073!1.94e-23!75;UBERON:0001016!1.94e-23!75;UBERON:0001017!2.85e-23!73;UBERON:0005743!2.85e-23!73;UBERON:0002616!6.43e-21!49;UBERON:0003056!2.13e-20!49;UBERON:0000955!2.97e-20!50;UBERON:0006238!2.97e-20!50;UBERON:0002020!2.81e-18!34;UBERON:0003080!7.90e-16!40;UBERON:0002780!5.76e-15!39;UBERON:0001890!5.76e-15!39;UBERON:0006240!5.76e-15!39;UBERON:0007811!1.98e-14!86;UBERON:0002791!5.53e-13!29;UBERON:0003528!5.53e-13!29;UBERON:0001893!5.53e-13!29;UBERON:0000153!5.00e-12!94;UBERON:0002021!5.16e-12!10;UBERON:0000411!5.16e-12!10;UBERON:0001950!5.16e-12!10;UBERON:0002619!1.37e-09!17;UBERON:0003076!2.22e-09!12;UBERON:0003057!2.22e-09!12;UBERON:0000956!2.32e-09!21;UBERON:0001869!2.32e-09!21;UBERON:0000203!2.32e-09!21;UBERON:0002240!1.59e-08!6;UBERON:0005174!1.59e-08!6;UBERON:0001137!1.59e-08!6;UBERON:0002298!1.15e-07!6;UBERON:0001948!2.03e-07!5;UBERON:0002315!2.03e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-34,54;UBERON:0001049,2.59e-29,52;UBERON:0005068,2.59e-29,52;UBERON:0006241,2.59e-29,52;UBERON:0007135,2.59e-29,52;UBERON:0001017,4.41e-28,73;UBERON:0002346,3.14e-27,64;UBERON:0003075,3.14e-27,64;UBERON:0007284,3.14e-27,64;UBERON:0001016,3.38e-27,75;UBERON:0002020,5.30e-26,34;UBERON:0004121,7.23e-24,95;UBERON:0000924,7.23e-24,95;UBERON:0006601,7.23e-24,95;UBERON:0002021,1.41e-23,10;UBERON:0000411,1.41e-23,10;UBERON:0001950,1.41e-23,10;UBERON:0010371,2.93e-23,73;UBERON:0002240,1.90e-19,6;UBERON:0005174,1.90e-19,6;UBERON:0001137,1.90e-19,6;UBERON:0010314,2.03e-17,92;UBERON:0002616,2.96e-17,46;UBERON:0000955,8.29e-17,47;UBERON:0006238,8.29e-17,47;UBERON:0001948,1.29e-16,5;UBERON:0002315,1.29e-16,5;UBERON:0003076,5.06e-16,12;UBERON:0003057,5.06e-16,12;UBERON:0003080,8.99e-16,40;UBERON:0003056,9.01e-16,49;UBERON:0003528,4.43e-15,29;UBERON:0002791,4.43e-15,29;UBERON:0001893,4.43e-15,29;UBERON:0002780,3.29e-14,39;UBERON:0001890,3.29e-14,39;UBERON:0006240,3.29e-14,39;UBERON:0002619,3.16e-13,17;UBERON:0002950,4.96e-12,4;UBERON:0001891,4.96e-12,4;UBERON:0009616,4.96e-12,4;UBERON:0010286,4.96e-12,4;UBERON:0000025,9.69e-11,114;UBERON:0002257,1.37e-10,3;UBERON:0000956,2.08e-10,21;UBERON:0001869,2.08e-10,21;UBERON:0000203,2.08e-10,21;UBERON:0004684,3.01e-10,3;UBERON:0002275,3.01e-10,3;UBERON:0004111,1.03e-09,122;UBERON:0002038,1.21e-09,3;UBERON:0009663,1.21e-09,3;UBERON:0009661,1.21e-09,3;UBERON:0000125,1.21e-09,3;UBERON:0002308,1.21e-09,3;UBERON:0002256,1.15e-07,2;UBERON:0011216,2.99e-07,194;UBERON:0001896,7.75e-07,2;UBERON:0002298,7.75e-07,2;UBERON:0005290,7.75e-07,2;UBERON:0010096,7.75e-07,2;UBERON:0000483,8.90e-07,174|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,8.56952953211411,5.52171352379034,0.244981598429908,0,0,3.30347642998166,5.2351808614927,6.60508093001847,0.395658863190582,1.00636407962651,0,6.42120897703176,2.25105044012672,1.5279824777681,10.0173719061047,6.97621235915604,3.54158947068071,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.49790639404823,0.457500602818626,0,0.869121600961382,0.767146371990992,1.66230435647648,1.1356888414743,0,0,0,0,0.130120442962704,0.229902104433473,0.360124259610698,1.20563854268572,0.0680364991513279,0.384341160854549,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,3.28192722458169,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,6.21227026878773,6.90487854760765,4.58316410751517,2.749650917499,0.685082519770642,1.5107877947794,2.02506750069542,2.70192721934532,4.07828168085784,5.1776031175182,0.93408612825759,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.883193520806384,0.685738504770831,0.354951612318675,0.238436189947321,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0|short_description=p@chr14:68704765..68704777,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:68704765..68704777,+ | |||
|id=chr14:68704765..68704777,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.10e-13!23;CL:0000337!2.10e-13!23;CL:0000540!1.74e-09!33;CL:0000047!1.74e-09!33;CL:0000031!1.74e-09!33;CL:0000404!1.74e-09!33;CL:0000393!4.33e-07!39;CL:0000211!4.33e-07!39;CL:0000221!5.31e-07!44;CL:0000133!5.31e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-20,23;CL:0000337,1.82e-20,23;CL:0000540,1.92e-13,33;CL:0000047,1.92e-13,33;CL:0000031,1.92e-13,33;CL:0000404,1.92e-13,33;CL:0000393,5.81e-11,39;CL:0000211,5.81e-11,39;CL:0002612,1.37e-10,3;CL:0002610,3.01e-10,3;CL:0002319,1.07e-09,43;CL:0002614,1.21e-09,3;CL:0000221,2.05e-09,44;CL:0000133,2.05e-09,44;CL:0002611,1.15e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.54e-27!71;UBERON:0003075!1.54e-27!71;UBERON:0007284!1.54e-27!71;UBERON:0000033!4.91e-25!63;UBERON:0001049!2.89e-24!52;UBERON:0005068!2.89e-24!52;UBERON:0006241!2.89e-24!52;UBERON:0007135!2.89e-24!52;UBERON:0004121!5.06e-24!102;UBERON:0000924!5.06e-24!102;UBERON:0006601!5.06e-24!102;UBERON:0000073!1.94e-23!75;UBERON:0001016!1.94e-23!75;UBERON:0001017!2.85e-23!73;UBERON:0005743!2.85e-23!73;UBERON:0002616!6.43e-21!49;UBERON:0003056!2.13e-20!49;UBERON:0000955!2.97e-20!50;UBERON:0006238!2.97e-20!50;UBERON:0002020!2.81e-18!34;UBERON:0003080!7.90e-16!40;UBERON:0002780!5.76e-15!39;UBERON:0001890!5.76e-15!39;UBERON:0006240!5.76e-15!39;UBERON:0007811!1.98e-14!86;UBERON:0002791!5.53e-13!29;UBERON:0003528!5.53e-13!29;UBERON:0001893!5.53e-13!29;UBERON:0000153!5.00e-12!94;UBERON:0002021!5.16e-12!10;UBERON:0000411!5.16e-12!10;UBERON:0001950!5.16e-12!10;UBERON:0002619!1.37e-09!17;UBERON:0003076!2.22e-09!12;UBERON:0003057!2.22e-09!12;UBERON:0000956!2.32e-09!21;UBERON:0001869!2.32e-09!21;UBERON:0000203!2.32e-09!21;UBERON:0002240!1.59e-08!6;UBERON:0005174!1.59e-08!6;UBERON:0001137!1.59e-08!6;UBERON:0002298!1.15e-07!6;UBERON:0001948!2.03e-07!5;UBERON:0002315!2.03e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-34,54;UBERON:0001049,2.59e-29,52;UBERON:0005068,2.59e-29,52;UBERON:0006241,2.59e-29,52;UBERON:0007135,2.59e-29,52;UBERON:0001017,4.41e-28,73;UBERON:0002346,3.14e-27,64;UBERON:0003075,3.14e-27,64;UBERON:0007284,3.14e-27,64;UBERON:0001016,3.38e-27,75;UBERON:0002020,5.30e-26,34;UBERON:0004121,7.23e-24,95;UBERON:0000924,7.23e-24,95;UBERON:0006601,7.23e-24,95;UBERON:0002021,1.41e-23,10;UBERON:0000411,1.41e-23,10;UBERON:0001950,1.41e-23,10;UBERON:0010371,2.93e-23,73;UBERON:0002240,1.90e-19,6;UBERON:0005174,1.90e-19,6;UBERON:0001137,1.90e-19,6;UBERON:0010314,2.03e-17,92;UBERON:0002616,2.96e-17,46;UBERON:0000955,8.29e-17,47;UBERON:0006238,8.29e-17,47;UBERON:0001948,1.29e-16,5;UBERON:0002315,1.29e-16,5;UBERON:0003076,5.06e-16,12;UBERON:0003057,5.06e-16,12;UBERON:0003080,8.99e-16,40;UBERON:0003056,9.01e-16,49;UBERON:0003528,4.43e-15,29;UBERON:0002791,4.43e-15,29;UBERON:0001893,4.43e-15,29;UBERON:0002780,3.29e-14,39;UBERON:0001890,3.29e-14,39;UBERON:0006240,3.29e-14,39;UBERON:0002619,3.16e-13,17;UBERON:0002950,4.96e-12,4;UBERON:0001891,4.96e-12,4;UBERON:0009616,4.96e-12,4;UBERON:0010286,4.96e-12,4;UBERON:0000025,9.69e-11,114;UBERON:0002257,1.37e-10,3;UBERON:0000956,2.08e-10,21;UBERON:0001869,2.08e-10,21;UBERON:0000203,2.08e-10,21;UBERON:0004684,3.01e-10,3;UBERON:0002275,3.01e-10,3;UBERON:0004111,1.03e-09,122;UBERON:0002038,1.21e-09,3;UBERON:0009663,1.21e-09,3;UBERON:0009661,1.21e-09,3;UBERON:0000125,1.21e-09,3;UBERON:0002308,1.21e-09,3;UBERON:0002256,1.15e-07,2;UBERON:0011216,2.99e-07,194;UBERON:0001896,7.75e-07,2;UBERON:0002298,7.75e-07,2;UBERON:0005290,7.75e-07,2;UBERON:0010096,7.75e-07,2;UBERON:0000483,8.90e-07,174 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,8.56952953211411,5.52171352379034,0.244981598429908,0,0,3.30347642998166,5.2351808614927,6.60508093001847,0.395658863190582,1.00636407962651,0,6.42120897703176,2.25105044012672,1.5279824777681,10.0173719061047,6.97621235915604,3.54158947068071,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.49790639404823,0.457500602818626,0,0.869121600961382,0.767146371990992,1.66230435647648,1.1356888414743,0,0,0,0,0.130120442962704,0.229902104433473,0.360124259610698,1.20563854268572,0.0680364991513279,0.384341160854549,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,3.28192722458169,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,6.21227026878773,6.90487854760765,4.58316410751517,2.749650917499,0.685082519770642,1.5107877947794,2.02506750069542,2.70192721934532,4.07828168085784,5.1776031175182,0.93408612825759,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.883193520806384,0.685738504770831,0.354951612318675,0.238436189947321,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr14:68704765..68704777,+ | |||
}} |
Revision as of 02:53, 13 September 2013
Short description: | p@chr14:68704765..68704777, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:68704765..68704777, + |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.82e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-20 | 23 |
neuron | 1.92e-13 | 33 |
neuronal stem cell | 1.92e-13 | 33 |
neuroblast | 1.92e-13 | 33 |
electrically signaling cell | 1.92e-13 | 33 |
electrically responsive cell | 5.81e-11 | 39 |
electrically active cell | 5.81e-11 | 39 |
neuron of the ventral spinal cord | 1.37e-10 | 3 |
raphe nuclei neuron | 3.01e-10 | 3 |
neural cell | 1.07e-09 | 43 |
neuron of the substantia nigra | 1.21e-09 | 3 |
ectodermal cell | 2.05e-09 | 44 |
neurectodermal cell | 2.05e-09 | 44 |
neuron of the dorsal spinal cord | 1.15e-07 | 2 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.