FFCP PHASE1:Mm9::chr1:173152639..173152650,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=641376|HGNC=|MCL_coexpression_id=1|UniProt=Q9CZR3|association_with_transcript=0bp_to_ENSMUST00000005817,NM_001037170,uc007dnj.1_5end|description=CAGE_peak_2_at_Tomm40l_5end|id=chr1:173152639..173152650,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,3.28e-08,3;CL:0002614,8.17e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.26e-14!73;UBERON:0005743!6.26e-14!73;UBERON:0000073!9.09e-14!75;UBERON:0001016!9.09e-14!75;UBERON:0000955!2.41e-12!50;UBERON:0006238!2.41e-12!50;UBERON:0001049!3.55e-12!52;UBERON:0005068!3.55e-12!52;UBERON:0006241!3.55e-12!52;UBERON:0007135!3.55e-12!52;UBERON:0002616!8.11e-12!49;UBERON:0004121!8.65e-11!102;UBERON:0000924!8.65e-11!102;UBERON:0006601!8.65e-11!102;UBERON:0000033!3.30e-10!63;UBERON:0002346!5.38e-10!71;UBERON:0003075!5.38e-10!71;UBERON:0007284!5.38e-10!71;UBERON:0002020!1.49e-08!34;UBERON:0003080!2.53e-08!40;UBERON:0002780!8.95e-08!39;UBERON:0001890!8.95e-08!39;UBERON:0006240!8.95e-08!39;UBERON:0004111!2.59e-07!122;UBERON:0002791!3.50e-07!29;UBERON:0003528!3.50e-07!29;UBERON:0001893!3.50e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.86e-20,54;UBERON:0000955,2.12e-17,47;UBERON:0006238,2.12e-17,47;UBERON:0001049,4.71e-17,52;UBERON:0005068,4.71e-17,52;UBERON:0006241,4.71e-17,52;UBERON:0007135,4.71e-17,52;UBERON:0001017,3.14e-16,73;UBERON:0002616,4.72e-16,46;UBERON:0001016,1.25e-15,75;UBERON:0002346,7.44e-13,64;UBERON:0003075,7.44e-13,64;UBERON:0007284,7.44e-13,64;UBERON:0003080,2.34e-11,40;UBERON:0004121,4.89e-11,95;UBERON:0000924,4.89e-11,95;UBERON:0006601,4.89e-11,95;UBERON:0003528,1.25e-10,29;UBERON:0002791,1.25e-10,29;UBERON:0001893,1.25e-10,29;UBERON:0010371,1.27e-10,73;UBERON:0002950,3.62e-10,4;UBERON:0001891,3.62e-10,4;UBERON:0009616,3.62e-10,4;UBERON:0010286,3.62e-10,4;UBERON:0002020,4.42e-10,34;UBERON:0002780,4.95e-10,39;UBERON:0001890,4.95e-10,39;UBERON:0006240,4.95e-10,39;UBERON:0010314,3.03e-09,92;UBERON:0003056,1.35e-08,49;UBERON:0004684,3.28e-08,3;UBERON:0002275,3.28e-08,3;UBERON:0002038,8.17e-08,3;UBERON:0009663,8.17e-08,3;UBERON:0009661,8.17e-08,3;UBERON:0000125,8.17e-08,3;UBERON:0002308,8.17e-08,3;UBERON:0002021,1.20e-07,10;UBERON:0000411,1.20e-07,10;UBERON:0001950,1.20e-07,10;UBERON:0002420,4.85e-07,8;UBERON:0007245,4.85e-07,8;UBERON:0010009,4.85e-07,8;UBERON:0010011,4.85e-07,8;UBERON:0000454,4.85e-07,8;UBERON:0004733,6.89e-07,6;UBERON:0004732,6.89e-07,6;UBERON:0002028,6.89e-07,6;UBERON:0007277,6.89e-07,6;UBERON:0003076,8.07e-07,12;UBERON:0003057,8.07e-07,12|phase1_expression=0.320297694209588,1.04692622291808,0,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0.404950534779652,0,0,0,0.42438965179803,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0.588231488031014,0,0,0.629484089877886,0.811015449756117,0.550640256485045,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,0.311068836925433,0.945041568321835,0.210324961351382,0.571301968807607,1.10434270475807,0.244981598429908,0.862609239164127,0,2.20231761998777,2.17068474744819,1.99688493233117,0.395658863190582,0.274462930807229,1.04182674111352,2.51264699101243,1.12552522006336,2.13917546887534,0.589257170947335,0.569486723196412,0.559198337475902,0.227178579999552,0.377857800533928,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0.340860645156116,0.779358013808606,0,0.704217098883403,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0.693941307064543,0.913396434936424,0,0.452167921657868,0.117588707135705,0.753999547978053,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,1.86391761218122,1.46390398505774,1.46612694769419,0.255457055208591,0.239630249011841,0,0,2.84602214869163,1.83000241127451,0.376963056338593,1.39059456153821,2.04572365864264,1.45451631191692,2.27137768294861,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.919608417733892,0,0.30140963567143,0.204109497453984,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.207125772535502,1.40715635988658,1.2604344302271,0.473489471170421,0.787056926989615,0.308534225774757,0,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.486412857275134,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,0.308713837137853,0.660837565967596,0,0,0.464473343720877,0.515469845288373,0.403367049246685,0,0,0,0.164698954724011,0,0,0.58489226135736,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,0.22849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| ||
|EntrezGene=641376 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9CZR3 | |||
|association_with_transcript=0bp_to_ENSMUST00000005817,NM_001037170,uc007dnj.1_5end | |||
|description=CAGE_peak_2_at_Tomm40l_5end | |||
|id=chr1:173152639..173152650,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.28e-08,3;CL:0002614,8.17e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.26e-14!73;UBERON:0005743!6.26e-14!73;UBERON:0000073!9.09e-14!75;UBERON:0001016!9.09e-14!75;UBERON:0000955!2.41e-12!50;UBERON:0006238!2.41e-12!50;UBERON:0001049!3.55e-12!52;UBERON:0005068!3.55e-12!52;UBERON:0006241!3.55e-12!52;UBERON:0007135!3.55e-12!52;UBERON:0002616!8.11e-12!49;UBERON:0004121!8.65e-11!102;UBERON:0000924!8.65e-11!102;UBERON:0006601!8.65e-11!102;UBERON:0000033!3.30e-10!63;UBERON:0002346!5.38e-10!71;UBERON:0003075!5.38e-10!71;UBERON:0007284!5.38e-10!71;UBERON:0002020!1.49e-08!34;UBERON:0003080!2.53e-08!40;UBERON:0002780!8.95e-08!39;UBERON:0001890!8.95e-08!39;UBERON:0006240!8.95e-08!39;UBERON:0004111!2.59e-07!122;UBERON:0002791!3.50e-07!29;UBERON:0003528!3.50e-07!29;UBERON:0001893!3.50e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.86e-20,54;UBERON:0000955,2.12e-17,47;UBERON:0006238,2.12e-17,47;UBERON:0001049,4.71e-17,52;UBERON:0005068,4.71e-17,52;UBERON:0006241,4.71e-17,52;UBERON:0007135,4.71e-17,52;UBERON:0001017,3.14e-16,73;UBERON:0002616,4.72e-16,46;UBERON:0001016,1.25e-15,75;UBERON:0002346,7.44e-13,64;UBERON:0003075,7.44e-13,64;UBERON:0007284,7.44e-13,64;UBERON:0003080,2.34e-11,40;UBERON:0004121,4.89e-11,95;UBERON:0000924,4.89e-11,95;UBERON:0006601,4.89e-11,95;UBERON:0003528,1.25e-10,29;UBERON:0002791,1.25e-10,29;UBERON:0001893,1.25e-10,29;UBERON:0010371,1.27e-10,73;UBERON:0002950,3.62e-10,4;UBERON:0001891,3.62e-10,4;UBERON:0009616,3.62e-10,4;UBERON:0010286,3.62e-10,4;UBERON:0002020,4.42e-10,34;UBERON:0002780,4.95e-10,39;UBERON:0001890,4.95e-10,39;UBERON:0006240,4.95e-10,39;UBERON:0010314,3.03e-09,92;UBERON:0003056,1.35e-08,49;UBERON:0004684,3.28e-08,3;UBERON:0002275,3.28e-08,3;UBERON:0002038,8.17e-08,3;UBERON:0009663,8.17e-08,3;UBERON:0009661,8.17e-08,3;UBERON:0000125,8.17e-08,3;UBERON:0002308,8.17e-08,3;UBERON:0002021,1.20e-07,10;UBERON:0000411,1.20e-07,10;UBERON:0001950,1.20e-07,10;UBERON:0002420,4.85e-07,8;UBERON:0007245,4.85e-07,8;UBERON:0010009,4.85e-07,8;UBERON:0010011,4.85e-07,8;UBERON:0000454,4.85e-07,8;UBERON:0004733,6.89e-07,6;UBERON:0004732,6.89e-07,6;UBERON:0002028,6.89e-07,6;UBERON:0007277,6.89e-07,6;UBERON:0003076,8.07e-07,12;UBERON:0003057,8.07e-07,12 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0.404950534779652,0,0,0,0.42438965179803,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0.588231488031014,0,0,0.629484089877886,0.811015449756117,0.550640256485045,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,0.311068836925433,0.945041568321835,0.210324961351382,0.571301968807607,1.10434270475807,0.244981598429908,0.862609239164127,0,2.20231761998777,2.17068474744819,1.99688493233117,0.395658863190582,0.274462930807229,1.04182674111352,2.51264699101243,1.12552522006336,2.13917546887534,0.589257170947335,0.569486723196412,0.559198337475902,0.227178579999552,0.377857800533928,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0.340860645156116,0.779358013808606,0,0.704217098883403,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0.693941307064543,0.913396434936424,0,0.452167921657868,0.117588707135705,0.753999547978053,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,1.86391761218122,1.46390398505774,1.46612694769419,0.255457055208591,0.239630249011841,0,0,2.84602214869163,1.83000241127451,0.376963056338593,1.39059456153821,2.04572365864264,1.45451631191692,2.27137768294861,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.919608417733892,0,0.30140963567143,0.204109497453984,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.207125772535502,1.40715635988658,1.2604344302271,0.473489471170421,0.787056926989615,0.308534225774757,0,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.486412857275134,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,0.308713837137853,0.660837565967596,0,0,0.464473343720877,0.515469845288373,0.403367049246685,0,0,0,0.164698954724011,0,0,0.58489226135736,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,0.228497025219458,1.1270773567308,0.814605311381257,0.193952487167626,0.350679099451593,0.252946148497029,0.442830443938806,0.31399745568275,0.493588655687202,0.592905254174298,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0.538192240565737,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,1.50791283939272,0.54390568381871,0,0.551873492609465,2.40825884981688,3.28192722458169,0.655739781506702,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,1.28528526568723,0.283880170416537,0.890328018336276,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.540183282093931,0.905510786479282,0.428674070063185,0,0.535106452806212,0.493647061806363,0.304464949114599,0,0,0.441056796109924,0.32977250588296,0,0.180938774784468,0.119372344003136,0.328281799490123,1.1659233465194,3.15223013417866,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0.276399947608848,0,0.632671987162271,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0,0.523511883968059,0.388844919875379,0.621339313086926,0,0.299033092087958,0.66183396182839,0.777804753376191,0.387479470433193,1.18269287843545,0.352071715937262,0,0.524296722128554,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0,0.292373642219257,0.384847366561318,0.233753804363138,0.453460767230423,0.221985953374065,0.358855426437903,0.167884616364078,0,0.187682475451182,0.36630324853453,0.214368379079066,1.00314420807073,1.12950368523413,0,1.14579102687879,0.859265911718438,0.685082519770642,3.0215755895588,0.675022500231806,1.35096360967266,2.26571204492102,1.03552062350364,0.103787347584177,0,0.512200817262403,0.486213434136588,0.838452650511929,0.551530525350042,0.222246727801615,1.03017528619447,0.962757628775446,0.252697211763798,0.25347929989024,0,0.187283014939765,0.448176066834085,0.574354689556133,0,0.231768651889711,0.77163688185482,0.824171801606613,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.3098736823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| |||
|short_description=p2@Tomm40l | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p2@Tomm40l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tomm40l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000005817, NM_001037170, uc007dnj.1_5end |
EntrezGene: | Tomm40l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.28e-08 | 3 |
neuron of the substantia nigra | 8.17e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.