FFCP PHASE1:Hg19::chr1:50889103..50889145,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=63950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13908|TSSclassifier=S|UniProt=Q96SC8|association_with_transcript=0bp_to_NM_032110,uc010onb.1_5end|coexpression_cluster_id=C2590|description=CAGE_peak_1_at_DMRTA2_5end|id=chr1:50889103..50889145,-|ontology_enrichment_celltype=CL:0002076!4.98e-08!43;CL:0002319!7.47e-08!25;CL:0002368!2.72e-07!13|ontology_enrichment_celltype_v019=CL:0002605;6.51e-11;3!CL:0000307;8.80e-10;3!CL:0002319;1.60e-08;25!CL:0002202;2.13e-08;9!CL:0002632;2.13e-08;9!CL:0000047;6.36e-08;2!CL:0000575;3.86e-07;2|ontology_enrichment_celltype_v019_2=CL:0002605,6.01e-11,3;CL:0000047,1.45e-10,8;CL:0000068,8.17e-10,3;CL:0000069,8.17e-10,3;CL:0000307,8.17e-10,3;CL:0000377,8.17e-10,3;CL:0002319,1.57e-08,25;CL:0002202,2.05e-08,9;CL:0002632,2.05e-08,9;CL:0002076,7.31e-08,42;CL:0000575,3.01e-07,2|ontology_enrichment_development_v019=CL:0000377;8.80e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;1.35e-09;5!DOID:1749;3.00e-07;14|ontology_enrichment_disease_v019_2=DOID:4362,1.70e-09,5;DOID:1749,2.83e-07,14|ontology_enrichment_uberon=UBERON:0001017!1.28e-21!82;UBERON:0005743!5.43e-20!86;UBERON:0000073!6.21e-20!94;UBERON:0001016!6.21e-20!94;UBERON:0000955!9.01e-19!69;UBERON:0006238!9.01e-19!69;UBERON:0002616!1.01e-17!59;UBERON:0001049!3.07e-17!57;UBERON:0005068!3.07e-17!57;UBERON:0006241!3.07e-17!57;UBERON:0007135!3.07e-17!57;UBERON:0002346!1.03e-16!90;UBERON:0002780!5.35e-15!41;UBERON:0001890!5.35e-15!41;UBERON:0006240!5.35e-15!41;UBERON:0003056!1.13e-14!61;UBERON:0003080!1.82e-14!42;UBERON:0003075!2.89e-14!86;UBERON:0007284!2.89e-14!86;UBERON:0000924!1.43e-13!173;UBERON:0006601!1.43e-13!173;UBERON:0000153!1.44e-13!129;UBERON:0007811!1.44e-13!129;UBERON:0001893!5.61e-13!34;UBERON:0000033!9.53e-13!123;UBERON:0002020!1.01e-12!34;UBERON:0003528!1.01e-12!34;UBERON:0002791!2.83e-12!33;UBERON:0004121!9.75e-12!169;UBERON:0001869!3.01e-11!32;UBERON:0000956!3.68e-11!25;UBERON:0000203!3.68e-11!25;UBERON:0002619!6.48e-08!22;UBERON:0001950!8.94e-08!20;UBERON:0000922!1.89e-07!612;UBERON:0000064!2.10e-07!219|ontology_enrichment_uberon_v019=UBERON:0000002;5.26e-08;6!UBERON:0001560;5.26e-08;6!UBERON:0003126;3.93e-07;7!UBERON:0001005;3.93e-07;7!UBERON:0007196;8.36e-07;15!UBERON:0001558;8.36e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000002,6.38e-08,6;UBERON:0001560,6.38e-08,6;UBERON:0003126,4.10e-07,7;UBERON:0001005,4.10e-07,7;UBERON:0001017,7.63e-07,81;UBERON:0007196,8.60e-07,15;UBERON:0001558,8.60e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.626909442956176,10.8769675109802,12.5924471067053,12.8053492386699,0,0.0821005894499457,0,0,0,0,3.67768489791571,0.90361775633475,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.72038491523742,1.82147644146271,8.89882662682631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,1.81628913173918,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72082757233402,0.121973706129595,0,0.116193942869518,1.55491582523056,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0.325808305310325,0,0,1.73895607462615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,30.2372602824731,10.4111883086097,20.1055091322201,5.86306928670221,14.0346525363696,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,1.73199802905922,5.3624182042863,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6516687877612,17.4467364156084,17.0186124546147,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,1.90012867315194,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,3.41380344856499,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0.295547618953547,0,1.41620002574687,2.64905114129346,0,0,0,1.16684937732704,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,2.89824871816911,0,0.937057782901357,0,0,0,0,0,5.20323694771833,0,1.20258735531594,0.103688191397247,0,0,0,0,0,5.82433626655182,0.347119476670262,0,2.17648016451006,0,0,0,0,0,0.581934098930517,0,3.61569185248852,0,0,0.253243183823515,4.69323318563527,0,0,0.1998096095821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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=63950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13908 | |||
|TSSclassifier=S | |||
|UniProt=Q96SC8 | |||
|association_with_transcript=0bp_to_NM_032110,uc010onb.1_5end | |||
|coexpression_cluster_id=C2590 | |||
|description=CAGE_peak_1_at_DMRTA2_5end | |||
|id=chr1:50889103..50889145,- | |||
|ontology_enrichment_celltype=CL:0002076!4.98e-08!43;CL:0002319!7.47e-08!25;CL:0002368!2.72e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002605;6.51e-11;3!CL:0000307;8.80e-10;3!CL:0002319;1.60e-08;25!CL:0002202;2.13e-08;9!CL:0002632;2.13e-08;9!CL:0000047;6.36e-08;2!CL:0000575;3.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.01e-11,3;CL:0000047,1.45e-10,8;CL:0000068,8.17e-10,3;CL:0000069,8.17e-10,3;CL:0000307,8.17e-10,3;CL:0000377,8.17e-10,3;CL:0002319,1.57e-08,25;CL:0002202,2.05e-08,9;CL:0002632,2.05e-08,9;CL:0002076,7.31e-08,42;CL:0000575,3.01e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;8.80e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.35e-09;5!DOID:1749;3.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.70e-09,5;DOID:1749,2.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-21!82;UBERON:0005743!5.43e-20!86;UBERON:0000073!6.21e-20!94;UBERON:0001016!6.21e-20!94;UBERON:0000955!9.01e-19!69;UBERON:0006238!9.01e-19!69;UBERON:0002616!1.01e-17!59;UBERON:0001049!3.07e-17!57;UBERON:0005068!3.07e-17!57;UBERON:0006241!3.07e-17!57;UBERON:0007135!3.07e-17!57;UBERON:0002346!1.03e-16!90;UBERON:0002780!5.35e-15!41;UBERON:0001890!5.35e-15!41;UBERON:0006240!5.35e-15!41;UBERON:0003056!1.13e-14!61;UBERON:0003080!1.82e-14!42;UBERON:0003075!2.89e-14!86;UBERON:0007284!2.89e-14!86;UBERON:0000924!1.43e-13!173;UBERON:0006601!1.43e-13!173;UBERON:0000153!1.44e-13!129;UBERON:0007811!1.44e-13!129;UBERON:0001893!5.61e-13!34;UBERON:0000033!9.53e-13!123;UBERON:0002020!1.01e-12!34;UBERON:0003528!1.01e-12!34;UBERON:0002791!2.83e-12!33;UBERON:0004121!9.75e-12!169;UBERON:0001869!3.01e-11!32;UBERON:0000956!3.68e-11!25;UBERON:0000203!3.68e-11!25;UBERON:0002619!6.48e-08!22;UBERON:0001950!8.94e-08!20;UBERON:0000922!1.89e-07!612;UBERON:0000064!2.10e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;5.26e-08;6!UBERON:0001560;5.26e-08;6!UBERON:0003126;3.93e-07;7!UBERON:0001005;3.93e-07;7!UBERON:0007196;8.36e-07;15!UBERON:0001558;8.36e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,6.38e-08,6;UBERON:0001560,6.38e-08,6;UBERON:0003126,4.10e-07,7;UBERON:0001005,4.10e-07,7;UBERON:0001017,7.63e-07,81;UBERON:0007196,8.60e-07,15;UBERON:0001558,8.60e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.626909442956176,10.8769675109802,12.5924471067053,12.8053492386699,0,0.0821005894499457,0,0,0,0,3.67768489791571,0.90361775633475,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.72038491523742,1.82147644146271,8.89882662682631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,1.81628913173918,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72082757233402,0.121973706129595,0,0.116193942869518,1.55491582523056,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0.325808305310325,0,0,1.73895607462615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,30.2372602824731,10.4111883086097,20.1055091322201,5.86306928670221,14.0346525363696,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,1.73199802905922,5.3624182042863,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6516687877612,17.4467364156084,17.0186124546147,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,1.90012867315194,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,3.41380344856499,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0.295547618953547,0,1.41620002574687,2.64905114129346,0,0,0,1.16684937732704,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,2.89824871816911,0,0.937057782901357,0,0,0,0,0,5.20323694771833,0,1.20258735531594,0.103688191397247,0,0,0,0,0,5.82433626655182,0.347119476670262,0,2.17648016451006,0,0,0,0,0,0.581934098930517,0,3.61569185248852,0,0,0.253243183823515,4.69323318563527,0,0,0.19980960958213,2.73771792592801,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0.410716136675979,0,1.71906176567983,0,0,0,0,2.1964690054889,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.546746009922222,0,0,0.0524545881349981,0,4.30289614398828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0.122026264901963,0.3755727921195,0,0.887432412294818,0.496771223531068,0.138348634936231,12.1230995723243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83294287600557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,4.58653788384978,0,0,0,0,0,0,0,0.699397538597222,1.24415452006595,0,4.42081726726395,0,0.218419276384028,0.33946505990805,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.449604575675217,0,0.638535436228605,0,2.52071696221718,0.276629009856872,0,0,0,5.30863755064832,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0.202612753855184,0,0,0.443910671357348,1.64092442705466,0,0,0.175871244359621,3.06629826335029,0,0,1.21393120847326,1.59363533945908,0,0,0,0.40781839786099,0.657727735628491,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,1.40363678077263,0,0.237840181555137,0,0,3.92503393273351,0,0,2.35158648180761,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,3.74963271071881,0,0.641930933513346,0,0,0.286679166302903,1.57771562193185,0.203974470572744,6.98161104544604,0,0,0,0,0.883164973845552,0,0,0.203977659483963,0,12.5896012362738,0,0.303114792872958,0.267964130156178,0,1.24119595034274,0,0.23806443146374,0.129177819672012,0.186224142887574,0,0,0,0,0,0,2.00822175099494,0.665320713092027,3.90735689332678,0,1.9307228228694,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p1@DMRTA2 | |||
}} |
Revision as of 06:03, 12 September 2013
Short description: | p1@DMRTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DMRTA2_5end |
Coexpression cluster: | C2590_Neural_acute_Corneal_Neurons_Astrocyte_anaplastic_Ciliary |
Association with transcript: | 0bp_to_NM_032110, uc010onb.1_5end |
EntrezGene: | DMRTA2 |
HGNC: | 13908 |
UniProt: | Q96SC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.01e-11 | 3 |
neuronal stem cell | 1.45e-10 | 8 |
duct epithelial cell | 8.17e-10 | 3 |
branched duct epithelial cell | 8.17e-10 | 3 |
tracheal epithelial cell | 8.17e-10 | 3 |
tracheoblast | 8.17e-10 | 3 |
neural cell | 1.57e-08 | 25 |
epithelial cell of tracheobronchial tree | 2.05e-08 | 9 |
epithelial cell of lower respiratory tract | 2.05e-08 | 9 |
endo-epithelial cell | 7.31e-08 | 42 |
corneal epithelial cell | 3.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 6.38e-08 | 6 |
neck of organ | 6.38e-08 | 6 |
trachea | 4.10e-07 | 7 |
respiratory airway | 4.10e-07 | 7 |
central nervous system | 7.63e-07 | 81 |
tracheobronchial tree | 8.60e-07 | 15 |
lower respiratory tract | 8.60e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.70e-09 | 5 |
squamous cell carcinoma | 2.83e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.