FFCP PHASE1:Hg19::chr1:55266962..55267003,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55001|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26067|TSSclassifier=S|UniProt=Q5TAA0|association_with_transcript=-21bp_to_NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end|description=CAGE_peak_1_at_TTC22_5end|id=chr1:55266962..55267003,-|ontology_enrichment_celltype=CL:0000791!3.27e-12!18;CL:0000789!3.27e-12!18;CL:0002420!3.27e-12!18;CL:0002419!3.27e-12!18;CL:0000790!3.27e-12!18;CL:0002076!3.39e-11!43;CL:0000838!2.20e-10!52;CL:0000542!6.06e-10!53;CL:0000051!6.06e-10!53;CL:0000223!7.47e-09!59;CL:0000084!8.38e-09!25;CL:0000827!8.38e-09!25;CL:0000625!9.38e-09!11;CL:0002368!6.79e-07!13;CL:0002251!9.10e-07!21|ontology_enrichment_celltype_v019=CL:0000791;6.63e-15;18!CL:0000789;6.63e-15;18!CL:0002419;6.63e-15;18!CL:0000625;1.17e-10;11!CL:0000084;1.49e-10;25!CL:0002076;2.92e-09;42!CL:0002368;1.95e-08;13|ontology_enrichment_celltype_v019_2=CL:0000791,4.30e-15,18;CL:0000789,4.30e-15,18;CL:0002420,4.30e-15,18;CL:0002419,4.30e-15,18;CL:0000790,4.30e-15,18;CL:0002076,1.34e-11,42;CL:0000838,6.19e-11,52;CL:0000625,1.06e-10,11;CL:0000084,1.10e-10,25;CL:0000827,1.10e-10,25;CL:0000542,1.54e-10,53;CL:0000051,1.54e-10,53;CL:0000223,4.63e-10,58;CL:0002368,1.59e-08,13;CL:0000066,9.65e-07,253|ontology_enrichment_development_v019=CL:0000790;6.63e-15;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.20e-13!115;UBERON:0004119!3.46e-13!169;UBERON:0000925!3.46e-13!169;UBERON:0006595!3.46e-13!169;UBERON:0001007!2.17e-09!155;UBERON:0001555!2.17e-09!155;UBERON:0007026!2.17e-09!155;UBERON:0004921!8.47e-09!129;UBERON:0004185!8.47e-09!129;UBERON:0000077!6.56e-08!130|ontology_enrichment_uberon_v019=UBERON:0004921;1.91e-09;33!UBERON:0001041;2.49e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.62e-18,160;UBERON:0000925,2.62e-18,160;UBERON:0006595,2.62e-18,160;UBERON:0001007,1.44e-13,145;UBERON:0001555,1.44e-13,145;UBERON:0007026,1.44e-13,145;UBERON:0004921,1.36e-12,118;UBERON:0001041,2.66e-08,87;UBERON:0003408,4.67e-08,10;UBERON:0001004,5.16e-08,74;UBERON:0005911,7.26e-08,82;UBERON:0000161,2.83e-07,36;UBERON:0001008,9.49e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,6.28021051175185,5.02415155899396,6.59417445571134,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.821005894499457,0.944529375764151,0.786728553697808,0.767658796194425,0.619264493264304,4.59710612239464,7.53014796945625,3.69754010166788,0,0,0.880801318004542,0.553995408531877,0.601633342410425,1.51907609501096,0.223915474239924,1.94336199611388,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,4.91524750135918,0,1.70692089026603,1.60158394814405,4.02326707968138,3.30522436392431,1.90810750907073,1.70763890732835,1.76171156811282,1.91136614062614,0,0.560508562981536,0.263384084775077,3.93419540227666,3.53709686474248,3.49522548299166,5.85152733867373,3.58514493296949,5.20792586308207,7.79306913631645,4.34500781852177,3.53527088969805,6.20294904834139,7.58250818542044,8.71020974134591,7.67350150603282,2.63100647365882,2.48715016007264,3.18783394308558,3.55887751588945,3.47803076516627,4.18142095219907,3.73920830901968,4.98186641682498,5.84166657320471,3.28925599625354,4.45991580053735,7.81300144627702,3.8018081777935,6.92645547757755,6.2713439465665,7.49584359314075,7.57687206540854,4.10563998460523,3.22570789159572,5.08136371988664,3.76543450095277,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,2.81605012320082,11.2931539370688,6.67411997011973,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,9.59406914713576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,2.72746120590835,3.72845974005705,0.365921118388786,0.132529768321485,0.464775771478074,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,6.33775174109154,3.9313088667105,1.18157981336281,0,0.983907508344908,0,4.06076056011915,2.24803506515239,2.71428225511403,6.5737796062556,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62403003920662,2.68771405118175,3.1190521393325,1.61205340865127,2.03443756959773,5.36735750831296,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,2.35378802386407,4.72873824484625,4.31255149719035,3.9786341246722,0,0,0,0,0,0.749007023947182,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,3.3082884179662,1.94142780736755,3.30855429190677,3.94065842880137,8.32177197552485,6.35019615992329,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,3.00759705454927,2.85451065701279,0,0,0,2.70719767744447,1.30926073077505,2.35304930753057,1.46139224653261,0.73886140225013,0,0,0,0,0.270946437543853,0.501689773854853,3.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26067 | |||
|TSSclassifier=S | |||
|UniProt=Q5TAA0 | |||
|association_with_transcript=-21bp_to_NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | |||
|description=CAGE_peak_1_at_TTC22_5end | |||
|id=chr1:55266962..55267003,- | |||
|ontology_enrichment_celltype=CL:0000791!3.27e-12!18;CL:0000789!3.27e-12!18;CL:0002420!3.27e-12!18;CL:0002419!3.27e-12!18;CL:0000790!3.27e-12!18;CL:0002076!3.39e-11!43;CL:0000838!2.20e-10!52;CL:0000542!6.06e-10!53;CL:0000051!6.06e-10!53;CL:0000223!7.47e-09!59;CL:0000084!8.38e-09!25;CL:0000827!8.38e-09!25;CL:0000625!9.38e-09!11;CL:0002368!6.79e-07!13;CL:0002251!9.10e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.63e-15;18!CL:0000789;6.63e-15;18!CL:0002419;6.63e-15;18!CL:0000625;1.17e-10;11!CL:0000084;1.49e-10;25!CL:0002076;2.92e-09;42!CL:0002368;1.95e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.30e-15,18;CL:0000789,4.30e-15,18;CL:0002420,4.30e-15,18;CL:0002419,4.30e-15,18;CL:0000790,4.30e-15,18;CL:0002076,1.34e-11,42;CL:0000838,6.19e-11,52;CL:0000625,1.06e-10,11;CL:0000084,1.10e-10,25;CL:0000827,1.10e-10,25;CL:0000542,1.54e-10,53;CL:0000051,1.54e-10,53;CL:0000223,4.63e-10,58;CL:0002368,1.59e-08,13;CL:0000066,9.65e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000790;6.63e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-13!115;UBERON:0004119!3.46e-13!169;UBERON:0000925!3.46e-13!169;UBERON:0006595!3.46e-13!169;UBERON:0001007!2.17e-09!155;UBERON:0001555!2.17e-09!155;UBERON:0007026!2.17e-09!155;UBERON:0004921!8.47e-09!129;UBERON:0004185!8.47e-09!129;UBERON:0000077!6.56e-08!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.91e-09;33!UBERON:0001041;2.49e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.62e-18,160;UBERON:0000925,2.62e-18,160;UBERON:0006595,2.62e-18,160;UBERON:0001007,1.44e-13,145;UBERON:0001555,1.44e-13,145;UBERON:0007026,1.44e-13,145;UBERON:0004921,1.36e-12,118;UBERON:0001041,2.66e-08,87;UBERON:0003408,4.67e-08,10;UBERON:0001004,5.16e-08,74;UBERON:0005911,7.26e-08,82;UBERON:0000161,2.83e-07,36;UBERON:0001008,9.49e-07,48 | |||
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| |||
|short_description=p1@TTC22 | |||
}} |
Revision as of 06:11, 12 September 2013
Short description: | p1@TTC22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TTC22_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_NM_001114108, NM_017904, uc001cxz.3, uc009vzt.1_5end |
EntrezGene: | TTC22 |
HGNC: | 26067 |
UniProt: | Q5TAA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.30e-15 | 18 |
alpha-beta T cell | 4.30e-15 | 18 |
immature T cell | 4.30e-15 | 18 |
mature T cell | 4.30e-15 | 18 |
immature alpha-beta T cell | 4.30e-15 | 18 |
endo-epithelial cell | 1.34e-11 | 42 |
lymphoid lineage restricted progenitor cell | 6.19e-11 | 52 |
CD8-positive, alpha-beta T cell | 1.06e-10 | 11 |
T cell | 1.10e-10 | 25 |
pro-T cell | 1.10e-10 | 25 |
lymphocyte | 1.54e-10 | 53 |
common lymphoid progenitor | 1.54e-10 | 53 |
endodermal cell | 4.63e-10 | 58 |
respiratory epithelial cell | 1.59e-08 | 13 |
epithelial cell | 9.65e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.62e-18 | 160 |
endoderm | 2.62e-18 | 160 |
presumptive endoderm | 2.62e-18 | 160 |
digestive system | 1.44e-13 | 145 |
digestive tract | 1.44e-13 | 145 |
primitive gut | 1.44e-13 | 145 |
subdivision of digestive tract | 1.36e-12 | 118 |
foregut | 2.66e-08 | 87 |
gland of gut | 4.67e-08 | 10 |
respiratory system | 5.16e-08 | 74 |
endo-epithelium | 7.26e-08 | 82 |
orifice | 2.83e-07 | 36 |
renal system | 9.49e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.