FFCP PHASE1:Hg19::chr10:26771179..26771190,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:26771179..26771190,-|id=chr10:26771179..26771190,-|ontology_enrichment_celltype=CL:0000738!2.01e-26!140;CL:0002087!4.87e-23!119;CL:0000037!1.15e-21!172;CL:0000566!1.15e-21!172;CL:0002031!1.77e-20!124;CL:0000988!8.02e-20!182;CL:0002032!2.05e-19!165;CL:0000837!2.05e-19!165;CL:0000791!3.82e-19!18;CL:0000789!3.82e-19!18;CL:0002420!3.82e-19!18;CL:0002419!3.82e-19!18;CL:0000790!3.82e-19!18;CL:0000838!8.26e-19!52;CL:0000542!2.42e-18!53;CL:0000051!2.42e-18!53;CL:0000624!2.65e-17!6;CL:0000084!5.54e-13!25;CL:0000827!5.54e-13!25;CL:0000898!9.35e-10!3;CL:0000623!9.75e-09!3;CL:0000825!9.75e-09!3;CL:0000842!2.39e-08!3;CL:0002057!1.10e-07!42;CL:0000625!1.11e-07!11;CL:0000815!4.73e-07!2;CL:0000792!4.73e-07!2;CL:0002677!4.73e-07!2;CL:0000860!5.47e-07!45|ontology_enrichment_celltype_v019=CL:0000898;4.55e-35;3!CL:0000815;5.35e-24;2!CL:0000792;5.35e-24;2!CL:0002677;5.35e-24;2!CL:0000624;6.69e-18;6!CL:0000895;6.82e-13;1|ontology_enrichment_celltype_v019_2=CL:0000898,2.25e-35,3;CL:0000815,3.34e-24,2;CL:0000792,3.34e-24,2;CL:0002677,3.34e-24,2;CL:0000624,4.72e-18,6;CL:0000810,5.38e-13,1;CL:0000895,5.38e-13,1;CL:0002436,5.38e-13,1;CL:0002427,5.38e-13,1;CL:0002428,5.38e-13,1;CL:0002429,5.38e-13,1;CL:0002433,5.38e-13,1;CL:0002431,5.38e-13,1;CL:0002432,5.38e-13,1;CL:0000893,3.93e-07,2;CL:0002489,3.93e-07,2;CL:0000809,3.93e-07,2;CL:0000808,3.93e-07,2;CL:0000894,3.93e-07,2;CL:0000806,3.93e-07,2;CL:0000807,3.93e-07,2;CL:0000805,3.93e-07,2;CL:0002425,3.93e-07,2|ontology_enrichment_development_v019=CL:0002427;6.82e-13;1!CL:0002425;4.42e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.32e-12!102;UBERON:0003061!7.32e-12!102;UBERON:0002193!3.58e-11!112;UBERON:0000178!3.03e-10!15;UBERON:0000179!3.03e-10!15;UBERON:0000463!3.03e-10!15;UBERON:0002370!2.09e-07!4;UBERON:0005058!2.09e-07!4;UBERON:0009113!2.09e-07!4;UBERON:0003295!2.09e-07!4;UBERON:0005562!2.09e-07!4|ontology_enrichment_uberon_v019=UBERON:0002370;2.35e-07;2!UBERON:0005058;2.35e-07;2!UBERON:0009113;2.35e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.70e-13,4;UBERON:0005058,7.70e-13,4;UBERON:0009113,7.70e-13,4;UBERON:0003295,7.70e-13,4;UBERON:0005562,7.70e-13,4;UBERON:0003351,7.33e-09,6;UBERON:0004177,1.02e-07,7;UBERON:0005057,1.02e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0,1.29096936716765,0,0,0,0,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0,0,0.75374599577023,0.521482918420201,0.868755378820466,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0.786839080455332,0.786021525498329,0.822405995998037,0,1.95553359980154,4.2610302516126,1.94826728407911,0.891283655081389,1.76763544484902,1.32920336750173,2.16643091012012,0.512365278902701,0.260118695119756,0.822189523018381,0.276350017785848,0.579606171470105,2.07601188426885,1.87278579662799,3.1360657141493,0.453237370790265,1.91610246800961,2.06176467289578,2.53019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.898401253958239,0,0,0,0,0,0,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:26771179..26771190,- | |||
|id=chr10:26771179..26771190,- | |||
|ontology_enrichment_celltype=CL:0000738!2.01e-26!140;CL:0002087!4.87e-23!119;CL:0000037!1.15e-21!172;CL:0000566!1.15e-21!172;CL:0002031!1.77e-20!124;CL:0000988!8.02e-20!182;CL:0002032!2.05e-19!165;CL:0000837!2.05e-19!165;CL:0000791!3.82e-19!18;CL:0000789!3.82e-19!18;CL:0002420!3.82e-19!18;CL:0002419!3.82e-19!18;CL:0000790!3.82e-19!18;CL:0000838!8.26e-19!52;CL:0000542!2.42e-18!53;CL:0000051!2.42e-18!53;CL:0000624!2.65e-17!6;CL:0000084!5.54e-13!25;CL:0000827!5.54e-13!25;CL:0000898!9.35e-10!3;CL:0000623!9.75e-09!3;CL:0000825!9.75e-09!3;CL:0000842!2.39e-08!3;CL:0002057!1.10e-07!42;CL:0000625!1.11e-07!11;CL:0000815!4.73e-07!2;CL:0000792!4.73e-07!2;CL:0002677!4.73e-07!2;CL:0000860!5.47e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000898;4.55e-35;3!CL:0000815;5.35e-24;2!CL:0000792;5.35e-24;2!CL:0002677;5.35e-24;2!CL:0000624;6.69e-18;6!CL:0000895;6.82e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,2.25e-35,3;CL:0000815,3.34e-24,2;CL:0000792,3.34e-24,2;CL:0002677,3.34e-24,2;CL:0000624,4.72e-18,6;CL:0000810,5.38e-13,1;CL:0000895,5.38e-13,1;CL:0002436,5.38e-13,1;CL:0002427,5.38e-13,1;CL:0002428,5.38e-13,1;CL:0002429,5.38e-13,1;CL:0002433,5.38e-13,1;CL:0002431,5.38e-13,1;CL:0002432,5.38e-13,1;CL:0000893,3.93e-07,2;CL:0002489,3.93e-07,2;CL:0000809,3.93e-07,2;CL:0000808,3.93e-07,2;CL:0000894,3.93e-07,2;CL:0000806,3.93e-07,2;CL:0000807,3.93e-07,2;CL:0000805,3.93e-07,2;CL:0002425,3.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;6.82e-13;1!CL:0002425;4.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.32e-12!102;UBERON:0003061!7.32e-12!102;UBERON:0002193!3.58e-11!112;UBERON:0000178!3.03e-10!15;UBERON:0000179!3.03e-10!15;UBERON:0000463!3.03e-10!15;UBERON:0002370!2.09e-07!4;UBERON:0005058!2.09e-07!4;UBERON:0009113!2.09e-07!4;UBERON:0003295!2.09e-07!4;UBERON:0005562!2.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.35e-07;2!UBERON:0005058;2.35e-07;2!UBERON:0009113;2.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.70e-13,4;UBERON:0005058,7.70e-13,4;UBERON:0009113,7.70e-13,4;UBERON:0003295,7.70e-13,4;UBERON:0005562,7.70e-13,4;UBERON:0003351,7.33e-09,6;UBERON:0004177,1.02e-07,7;UBERON:0005057,1.02e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0,1.29096936716765,0,0,0,0,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0,0,0.75374599577023,0.521482918420201,0.868755378820466,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0.786839080455332,0.786021525498329,0.822405995998037,0,1.95553359980154,4.2610302516126,1.94826728407911,0.891283655081389,1.76763544484902,1.32920336750173,2.16643091012012,0.512365278902701,0.260118695119756,0.822189523018381,0.276350017785848,0.579606171470105,2.07601188426885,1.87278579662799,3.1360657141493,0.453237370790265,1.91610246800961,2.06176467289578,2.53019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.898401253958239,0,0,0,0,0,0,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.968833647540092,4.2831552864142,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p@chr10:26771179..26771190,- | |||
}} |
Revision as of 12:58, 10 September 2013
Short description: | p@chr10:26771179..26771190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:26771179..26771190, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 2.25e-35 | 3 |
regulatory T cell | 3.34e-24 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.34e-24 | 2 |
naive regulatory T cell | 3.34e-24 | 2 |
CD4-positive, alpha-beta T cell | 4.72e-18 | 6 |
CD4-positive, alpha-beta thymocyte | 5.38e-13 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.38e-13 | 1 |
mature CD4 single-positive thymocyte | 5.38e-13 | 1 |
resting double-positive thymocyte | 5.38e-13 | 1 |
double-positive blast | 5.38e-13 | 1 |
CD69-positive double-positive thymocyte | 5.38e-13 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.38e-13 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.38e-13 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.38e-13 | 1 |
thymocyte | 3.93e-07 | 2 |
double negative thymocyte | 3.93e-07 | 2 |
double-positive, alpha-beta thymocyte | 3.93e-07 | 2 |
DN4 thymocyte | 3.93e-07 | 2 |
DN1 thymic pro-T cell | 3.93e-07 | 2 |
DN2 thymocyte | 3.93e-07 | 2 |
DN3 thymocyte | 3.93e-07 | 2 |
immature single positive thymocyte | 3.93e-07 | 2 |
early T lineage precursor | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.70e-13 | 4 |
hemolymphoid system gland | 7.70e-13 | 4 |
thymic region | 7.70e-13 | 4 |
pharyngeal gland | 7.70e-13 | 4 |
thymus primordium | 7.70e-13 | 4 |
pharyngeal epithelium | 7.33e-09 | 6 |
hemopoietic organ | 1.02e-07 | 7 |
immune organ | 1.02e-07 | 7 |
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