FFCP PHASE1:Hg19::chr10:54783268..54783282,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1586|description=CAGE_peak_at_chr10:54783268..54783282,-|id=chr10:54783268..54783282,-|ontology_enrichment_celltype=CL:0000039!1.08e-13!7;CL:0000586!1.08e-13!7;CL:0002563!3.29e-11!4;CL:1001319!4.91e-11!1;CL:1000600!4.91e-11!1;CL:0000540!1.21e-07!6;CL:0000031!1.21e-07!6;CL:0000404!1.21e-07!6|ontology_enrichment_celltype_v019=CL:0000039;1.49e-38;7!CL:0000586;1.49e-38;7!CL:0002253;7.05e-34;2!CL:0002563;1.03e-17;4|ontology_enrichment_celltype_v019_2=CL:0000039,1.49e-38,7;CL:0000586,1.49e-38,7;CL:0002253,7.05e-34,2;CL:0002563,1.03e-17,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3371!1.97e-11!1;DOID:4549!1.97e-11!1;DOID:5861!1.97e-11!1;DOID:6496!1.97e-11!1|ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22|ontology_enrichment_disease_v019_2=DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22|ontology_enrichment_uberon=UBERON:0003350!1.09e-18!5;UBERON:0001046!4.46e-13!19;UBERON:0001301!2.42e-11!1;UBERON:0001242!3.29e-11!4;UBERON:0001262!3.29e-11!4;UBERON:0004786!3.29e-11!4;UBERON:0004808!3.29e-11!4;UBERON:0001277!3.29e-11!4;UBERON:0001052!3.46e-11!4;UBERON:0004645!4.91e-11!1;UBERON:0001256!4.91e-11!1;UBERON:0001259!4.91e-11!1;UBERON:0004907!3.98e-09!5;UBERON:0000344!4.15e-08!12;UBERON:0000060!4.15e-08!12;UBERON:0000162!6.70e-07!14;UBERON:0001353!6.70e-07!14;UBERON:0000163!6.70e-07!14;UBERON:0006866!6.70e-07!14;UBERON:0000164!6.70e-07!14;UBERON:0000931!6.70e-07!14|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8!UBERON:0001155;1.21e-08;9!UBERON:0000059;2.63e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0003350,1.47e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000485,1.21e-08,9;UBERON:0000059,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38071418337314,0.0897576444097721,3.36806852958225,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr10:54783268..54783282,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1586 | |||
|description=CAGE_peak_at_chr10:54783268..54783282,- | |||
|id=chr10:54783268..54783282,- | |||
|ontology_enrichment_celltype=CL:0000039!1.08e-13!7;CL:0000586!1.08e-13!7;CL:0002563!3.29e-11!4;CL:1001319!4.91e-11!1;CL:1000600!4.91e-11!1;CL:0000540!1.21e-07!6;CL:0000031!1.21e-07!6;CL:0000404!1.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.49e-38;7!CL:0000586;1.49e-38;7!CL:0002253;7.05e-34;2!CL:0002563;1.03e-17;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.49e-38,7;CL:0000586,1.49e-38,7;CL:0002253,7.05e-34,2;CL:0002563,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!1.97e-11!1;DOID:4549!1.97e-11!1;DOID:5861!1.97e-11!1;DOID:6496!1.97e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0003350!1.09e-18!5;UBERON:0001046!4.46e-13!19;UBERON:0001301!2.42e-11!1;UBERON:0001242!3.29e-11!4;UBERON:0001262!3.29e-11!4;UBERON:0004786!3.29e-11!4;UBERON:0004808!3.29e-11!4;UBERON:0001277!3.29e-11!4;UBERON:0001052!3.46e-11!4;UBERON:0004645!4.91e-11!1;UBERON:0001256!4.91e-11!1;UBERON:0001259!4.91e-11!1;UBERON:0004907!3.98e-09!5;UBERON:0000344!4.15e-08!12;UBERON:0000060!4.15e-08!12;UBERON:0000162!6.70e-07!14;UBERON:0001353!6.70e-07!14;UBERON:0000163!6.70e-07!14;UBERON:0006866!6.70e-07!14;UBERON:0000164!6.70e-07!14;UBERON:0000931!6.70e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8!UBERON:0001155;1.21e-08;9!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0003350,1.47e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000485,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38071418337314,0.0897576444097721,3.36806852958225,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:54783268..54783282,- | |||
}} |
Revision as of 13:40, 10 September 2013
Short description: | p@chr10:54783268..54783282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:54783268..54783282, - |
Coexpression cluster: | C1586_choriocarcinoma_serous_maxillary_colon_small_Prostate_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.49e-38 | 7 |
germ cell | 1.49e-38 | 7 |
epithelial cell of large intestine | 7.05e-34 | 2 |
intestinal epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.03e-17 | 4 |
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
lower digestive tract | 1.83e-14 | 5 |
epithelium of mucosa | 1.47e-09 | 8 |
colon | 1.21e-08 | 9 |
simple columnar epithelium | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.